Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           ------>ZmHOX2a(2)                                                        --------->CCA1(2)                                                       --------->ARR14(2)                                        --------->LBD16<---------ARR14(2)                                       --------->TOE2(3)<------ZmHOX2a(2)                            --------->YAB1             <---------ARR11(3)                            <---------ICU4             --------->AGP1                            --------->ATHB51           --------->ARR11(3)                           <---------ATHB12  -------->HAHB4                           --------->ICU4    --------->YAB1                           <---------ATHB51 --------->ICU4                         --------->WOX13(1) <---------YAB1                      --------->ANAC58 --------->ANAC46<---------AGP1                      --------->ANAC46 --------->ANAC55(2)                      --------->ANAC58 <---------ANAC55(2)           --------->ZAT14               --------------->AGL15--------->GLK1(2) <---------GLK1(1)------->TEIL            <---------ARR11(3)<---------TOE2(3)<---------YAB1  --------->GLK1(2)      ---------->DOF2   aagtgatttctcaacatctactataagcaattatggataatccgtaatgatacttgagatctgagaaactgtgaacccatgacttctcaaaagactcaga  23134800                         <---------ARR11(1)                         --------->GLK1(2)        <---------ARR14(2)        --------->ARR14(2)          <----------DOF2           <---------TOE1(3)       <------ZmHOX2a(1) ------->TEIL                         <---------TOE2(3)       --------->ATHB12 <---------CCA1(2)                     --------->MYB59      <---------YAB1 <---------HSFB2a(2)                 <----------DOF2     ------->TEIL         ===    --------->YAB1   ------>ZmHOX2a(1)               <---------ZAT18 --------->ANAC46             ---  --------->GLK1(2)  --------->HSFB2a(2)           <---------At4g35610    <---------ATHB12     ------   acagaatcaggattggccttgtcctcgaatctaaatttctttgaaatcgattcagcgagctttttaggtaaacccaatgaatcaacgaggtaagagactg  23134900                                                 --------->ANAC58                                            --------->At4g35610          <----------DOF2                  ----------->RAV1(1)          <---------DAG2                 <---------At4g35610         <---------DAG2                  --------->At4g35610      <-----------GT1                    --------->ZAT2   --------------->AtSPL8               ----------->RAV1(1)  <---------ARR11(3)                  --------->At4g35610  --------->ARR11(3)                  <---------At4g35610 --------->ZAT14 ==========================================bZIP_DOF      --------->ALFIN1  --------->DAG2 ------->DOF2  <-----------GT1   --------->TGA1a --------->ANAC58    ----------->GT1 ----->GT1=================================bZIP_DOF ----------->RAV1(1)   ---------->DOF2       -----   taaagttcttacctttttgactatctataaggctcacatcagcagcagcactagcaacagtggagaaggaattggaaaaagcagagaatacattttgcaa  23135000                                  ------->TEIL------>ZmHOX2a(2)                      --------->ANAC46       <------ZmHOX2a(2)                      --------->ANAC58      --------->ARR14(2)                      --------->ANAC58      --------->AGP1                      <---------ANAC55(2)   <---------AGP1                      --------->ANAC55(2)   <---------ARR14(2)                      --------->bZIP60(1)   --------->ARR11(3)                      <---------bZIP60(1)   <---------ARR11(3)                       <-----------HVH21                    <-----------GT1       ----------->ARR10                  <---------ANAC55(2)                <---------TOE2(3) <-----------GT1                            --------->ANAC55(2)               ---------->DOF2 --------->ANAC55(2)                      --------->ANAC46 <---------CCA1(2) ----->DOF2--------->ZAT6     <---------TOE2(3)      <---------AtLEC2   --------->bZIP60(2)        <-   aagcttcactgaaacactaaagttacgccatttatgtaactcgatagatcttcttccatggagtatcagagaacacatcacataaccagtcaaatctctt  23135100              --------->TOE2(3)              --------->YAB1           --------->WOX13(1)         <------ZmHOX2a(2)                  <---------GLK1(2)            --------->At4g35610       <------ZmHOX2a(1)                    <---------ARR11(3)           <---------At4g35610    --------->HSFB2a(2)                     <---------ARR14(3)           ----------->RAV1(2)  -------    <---------HSFB2a(2)                     --------->ARR14(3)       <-----------TGA1    <---------ETT(1) <----------DOF2                <---------HSFB2a(2)   ----------->GT1<-----------HVH21--------->GLK1(2) --------At4g35610         ---------->DOF2  --------->ARR11(3)     <-------TEIL      <---------GLK1(2)   ccgcttcgaggatcaatcttagaacccaaaaaatcgcgaagaacaagattttggagagggaaaacaaaattcgtcatctgggttttagattccgacatga  23135200                                                       <---------MYB59                                                     <---------ARR11(3)                      <-------                                                   --------->ICU4                            --------                                                 --------->YAB1      <-----------GT1     <---------ANAC46            <----------DOF2                     --------->ICU4   --------->ATHB51        <---------ANAC58           <---------DAG2                ---------->DOF2         --------->AHL20(2)      <---------ANAC58    <---------ARR14(2)                --------->TOE2(3)------>ZmHOX2a(2)             <----------DOF2    <------------CBF<---------MYB59   --------->YAB1 --------->ARR11(3)         <---------ALFIN1 -->ICU4   <----------DOF2       ------------>CBF<---------ICU4 <---------MYB52(1) <---------DAG2<---   tcagagtattgggccttttgggcctaatcgctcaaaacaatgttaaagccataatgatctaactccattatttacgactgtgccactctttccttgtagc  23135300                                ------->GAMYB                            <---------WRKY38(1)                            <---------WRKY12                           <-----------HVH21         <---------------AGL15 --------->ANAC58                     <-------GAMYB      <-----------GT1  ------->TEIL                                --------->MYB52(2)  <----------DOF2    <---------SPL7                        --------->WRKY38(1)  <---------DAG2   <---------------AtSPL8                  <---------ZAT14 <---------ANAC58  <---------------AtSPL3    <---------MYB52(1)    <---------MYB46(3) <---------ANAC58 <------------------SPL14  --------->TOE2(3)    <---------MYB52(1) --CCA1(2)      <---------TOE2(3)          --------->ANAC46--------->ZAT14 -->ID1  --------------->AGL15 --------->ANAC58            --------->ZAT18 -------DOF2    <---------YAB1 --------->ANAC46           --------->DOF5.7(2)  <----------DOF2   tttgcttttttctctattaagaatgtacggacaacgaaaccctctacgttattaagaagcgttcactgtttgttgtcaagtcttttcaagtttcaacaaa  23135400                                            --------->ANAC46                                            --------->ANAC58                      <---------ANAC55(2)   --------->ANAC55(2)                     <-------TEIL           --------->ANAC58                                      ---                --------->AHL20(2)        <-----------GT1                  --------->GLK1(2)      <--             ----------->GT1       ------------>CBF                    --------->YAB1            <---            --------->DAG2      --------->MYB46(3) <----------DOF2    <---------YAB1          <------           ---------->DOF2   <----------ID1<---------LBD16          --------->YAB1      <----------DOF2   atgtcattagaaataaagttaaatacataagagaacaaacaatttcacggactctttagttcggagacagtgatcataatctgatatatactttgtagtc  23135500                                                                <---------AHL20(2)                                                                --------->AHL20(2)     <---------WRKY18(1)            <------ZmHOX2a(2)     --------->ANAC55(2)    ----------->HVH21             ------->GAMYB           --------->ANAC58   <----------DOF2               --------->MYB46(3)       --------->ANAC58  <---------ANAC58            --------->MYB46(3)        <-----------GT1                         <----  <---------ANAC58           ------>MYB83            <---------REM1(1)                          ----- ------>ANAC55(2)            ------>MYB46(1)      --------->MYB52(2)              --------->HSFB2a(2) -------ANAC55(2)         --------->MYB46(3)    <---------MYB52(1)                <---------HSFC1(1) ------LBD16         --------->At4g35610       <----------DOF2  <---------AHL20(1)--------->HSFC1(1) -----HVH21          <---------At4g35610      --------->TOE2(3) --------->AHL20(1)<---------HSFB2a(2)   acgggcttgaccttgaagtttgcatcggaccaacaacgatccaaaaaacctttagttgtaacgcaataaaatgctccaatatttctcgaagtttggaaca  23135600                                               --------->TOE2(3)                                               --------->YAB1                                           <---------SPL7                                          <---------ANAC58                                          --------->ANAC55(2)                                          --------->ANAC58                                          <---------ANAC58                                          --------->ANAC58                     <-----------GT1                                         --------------->AtSPL3       <---------ZAT14                                    <---------MYB52(1)                <---------ZAT18      <-----------GT1        ------->MYC3--------------->AtSPL8       --------->ZAT14  <----------DOF2            <-------MYC3------->TEIL               --------->ANAC46                < -----ARR11(3)   <---------ANAC58 --------->MYB52(2)           --------->ARR14(2)--------->ZAT6     < ---->ARR11(3)   <---------ANAC58<-------TEIL------->TEIL--------->YAB1    --------->YAB1          <-   tcttcttttttcttcattttcttgccttacacatgttcgtttgtacgtaccataacaaataatcaaatctactacacttataaacactatacctatttat  23135700  Previous    Next  AGI:  At1g62490.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT1G61960.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65474.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 23134070    to: 23135198    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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