Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------ANAC55(2)                                                               <---------O2                                                               <---------ANAC58                                                               --------->O2                                                               <---------ANAC55(1)                                                               --------->ANAC55(2)                                                               --------->TGA1a                                                               --------->bZIP60(1)                                                               <---------ANAC46                                                               <---------TGA1a                                                               <---------ANAC58                                                        <---------YAB1                                            <---------ANAC58   <---------bZIP60(2)                                  --------->GLK1(1)   --------->ATHB12                                  <---------GLK1(1)  <---------YAB1                                 <---------ARR11(3)  --------->ICU4                               <---------TOE2(3)   <---------ICU4                               <---------TOE1(3)  --------->ICU4          <-----------TBP                           <----------DOF2  <---------ANAC58   <---------bZIP60(1)           -------- ---->GLK1(2)              ==============================================bZIP_DOF      <---------AHL20(2) ----GLK1(2)              <---------ANAC58  ----------->GT1   ----------->STF1        <-------------- --->ARR14(2)             <---------ANAC58  <---------ANAC46----------->TGA1          =============== ----ARR14(2)    <-----------GT1 --------->ARR11(3)--------->YAB1----------->HVH21  --------->YAB1   tcttcatgtttagtgattttttcttcttgctttaagatttctgaggtcgtgaattatgattaatgacgtgaagtctatatatagattaataaatgtggta  21104600                                                                                       <------------CBF                                                                                      --------->ATHB12                                                                   <---------------AGL15                                             <---------------AtSPL8--------------->AGL15                                        <---------KAN4(1)         <-----------------AGL3                                        --------->KAN4(1)         ----------------->AGL3  --------->YAB1                                       ---------->TaMYB80         <---------ANAC46   <---------YAB1                     --------->AHL20(2)<---------KAN4(2) --------->ARR11(3)         <---------ARR11(3)                  ----------->GT1    <------ZmHOX2a(1)   <---------GLK1(2)          --------->ARR11(3) --->GT1         ----------->GT1   <---------TOE2(3)     <---------ARR11(3)    <---------YAB1 -AGL15   ---------->DOF2          <---------TOE1(3) ---------->DOF2           <---------ANAC46 ==================================================================================MADS_MADS     <---   tttttaaaacagaaaagaagagataaaatcgatttttaaggaatatactagtacaaaaagattttgttccctatattagttacgaatatcattgatattt  21104700                                                               <-------GAMYB       --------->AHL20(2)                                     <---------MYB46(3)         <-----------GT1       <---------YAB1                                        <---------YAB1          <---------AHL20(2)       <---------AHL20(2)                             <---------AHL20(2)            --------->AHL20(2)      --------->AHL20(2)                              --------->AHL20(2)            <---------AHL20(2)      <---------AHL20(1)                         <---------CCA1(1)             --------->TOE2(3)      --------->AHL20(1)                <---------TOE2(3)  -------->HAHB4    <---------ARR11(3)     --------->YAB1            <---------AHL20(2)<---------RVE1(1)      <---------AHL20(2)  <---------AHL20(2)          <---------AHL20(1)<---------ARR11(3)      --------->AHL20(2) <---------AHL20(2)           <---------AHL20(2)--------->ARR11(3)      --------->AHL20(1)       <--- --------->AHL20(2)           --------->AHL20(2)<---------GLK1(2)       <---------AHL20(1)      <---- ------YAB1              ------------>CBF   ---------->DOF2--------->YAB1    --------->ARR11(3) -----   tgattaaatataatttagtttgctaatttcaattttttttttaagaaaaagattttttaaatgatggttgaaaatttattatcttattaattcacttatt  21104800                                                                                  --------------->AGL15                                                                                  <---------------AGL15                                                                                 <-----------------AGL3                                                                                 <-----------------AGL2                                                                                 <-----------------AGL1                                                                                 ----------------->AGL2                        ------->MYC3                                             <-----------------AG              --------->ANAC55(2)                                         ------>NtERF2              <---------ANAC46                                            --------->LBD16             <---------LBD16                                             --------->ANAC58          ----------------------->TaNAC69(2)                             --------->ANAC46         <-----------RAV1(1)                    --------->TOE1(3)        <---------ALFIN1 ------AHL20(2)         <-------MYC3            --------->TOE2(3)        --------->ANAC58 -----AHL20(2)<---------ANAC58       <<<<<<<<<<<<WRKY18                 <---------LBD16       <------ ---->AHL20(2)<---------ANAC58       ---------->DOF2         <---------AHL20(2)  ----------------->AGL3   aattcaaacacttgttgcgcattacacgtttattttgtcaaaagtcaaaaccctaaaacatgtttattttgtctcccgcctcttccatttttggttcttt  21104900                                                                <---------ANAC46                                                            <------------CBF                                                           --------->ATHB51              --------->ANAC55(2)                                       --------->ARR14(2)  <---------ICU4                <---------ANAC55(2)                       <---------TOE2(3)                  --------->ICU4          <------------CBF                      --------->MYB52(1)  --------->YAB1--------->YAB1---------->DOF2<-----------HVH21                      <---------DOF5.7(2)<-------TEIL--------->WOX13(1)         <---------YAB1 ----DOF2           --------->DOF5.7(2)<---------ARR14(2) <---------YAB1    <----------DOF2   gggattttgttttgttttgtaagttaacgaagagagaagcagattcataaatagtcattcataattgtgtttaaaaggctttgtcattgtcatgtattct  21105000                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)                 <---------ARR14(2)                                      --------->ANAC46                 --------->AGP1        ----------->GT1                   --------->ANAC55(1)                 --------->ARR14(2)    <---------ANAC58                  --------->ANAC58                 --------->ARR11(3)    <---------ANAC58                  --------->ANAC58                 <---------ARR11(3)    <---------ANAC55(2) <---------ZAT14                 <-----------ARR10     <---------ANAC46    --------->ZAT14                --------->RVE1(1) <---------ICU4---------->DOF2          <---------ANAC55(2)             ---------->DOF2----------->GT1   <---------YAB1             --------->ANAC55(2)    <---------YAB1--------->CCA1(2)    --------->ANAC55(2) <---------ZAT18              <-----------GT1   ctaattcttcttggaaaaagatctaccgagttgcaaaaatggcgtaatatgaaagcttcagtgaacttgtgcaaaacgtaatctctgttttctccaattc  21105100                     <---------bZIP60(1)                    ------->GAMYB                <---------At4g35610                        <------------MYB.PH3(1)               --------->ICU4                            <-----------GT1                    ---------             <---------At4g35610                         --------->MYB52(1)             <---------ARR14(2)        <---------MYB52(1)                               <---------DOF5.7(2)         <------MYB83<---       <-----------HVH21   ------>ZmHOX2a(2)       <---------RAP2.6(3)               <------MYB46(1)    ==============================HOX2a_HOX2a     --------->RAP2.6(2)               <---------MYB46(3)    ------>ZmHOX2a(1)--------->bZIP60(1)   ---------->DOF2<---------At5g28300   --------->ATHB12-----   attctcctctgttagtgctgatgatgtgatccctagagatgctcaaaaagagccgaaattaacggtctcttaccttgttgattcagtgggtataccgata  21105200                                           <---------ZAT18                                  ---------                                    <------ZmHOX2a(1)                                      --------->ARR14(2)                                   <----------ID1                                          <---------GLK1(2)           --------->WOX13(1)   ---------->DOF2                 <---------ARR14(2)         <---------ARR14(2)     <---------TOE1(2)      <---------At4g35610                 --------->ARR14(2)    <-----------GT1 -->GT1 --------->GLK1(2)   <---------ZAT2 --------->ZAT18      ------->TEIL     --------->ATHB12   - ------AHL20(2)             --------->At4g35610      --------->GLK1(2)          <---------YAB1     <- ---->AHL20(2)--------->YAB1--------->ZAT2 --------->ZAT14     <---------CCA1(2)--------->ICU4     --   aaattcgcagaatcaatcttgaaggaagtcagctcaaaggacaagtgcaatcccaattctgttctgaatcttctaagaagttatgatttcacagattctc  21105300               <---------YAB1             <---------ICU4          --------->ATHB12          <---------HSFB2a(2)          <--------HAHB4            --------->HSFB2a(2)  <---------MYB52(1)          <---------ICU4        <---------ANAC58         <----------DOF2       --------->YAB1           <---------ANAC58   --------->ARR14(2)     --------->ANAC58           <---------ANAC55(2)<---------ARR14(2)     --------->ANAC58      <---------ICU4          <---------GLK1(1) >GLK1(2)<---------YAB1  --------->LBD16  --------->ARR11(3) -------->GLK1(1)       <---------HSFB2a(2)        --------->GLK1(1) --------ARR11(3)       --------->HSFB2a(2) --------->At4g35610                       --------->LBD16 ------->ARR11(3)      ------>ZmHOX2a(2) <---------At4g35610                        <---------ZAT14 -   agatatcaagcatcattacgactgatccagaattacttatggaagatgctgagaattccctttgtcccaagcttaagtttttggagtccagagaaatttt  21105400                                     <---------ARR14(3)                                     --------->GLK1(2)<----------ID1                                     --------->ARR14(3)           --------->YAB1                                     --------->ARR11(3)     --------->ARR11(3)                                     <---------ARR14(2)     --------->GLK1(2)                            <---------GLK1(1)<------ZmHOX2a(1)   <---------YAB1                     <-----------GT1 <---------ARR11(3)<------ZmHOX2a(1)             --------->YAB1<---------ZAT6  <---------TOE2(3)<---------ARR11(3)                      <            ----------->HVH21   <---------HSFB2a(2)   ----------->GT1                             --- -------->ARR11(3)----------->GT1--------->LBD16     ----------->GT1              <----------DOF2----   aagctctaggctcaatgacattgttactagagttccgaaaatcttgaggatggaagaggaaaaatctatgatcacatactatgactttgtcaaaaccatt  21105500  Previous    Next  AGI:  At1g56360.1    Description:  ATPAP6/PAP6 (purple acid phosphatase 6); acid phosphatase/ protein serine/threonine phosphatase. similar to ATPAP25/PAP25 (purple acid phosphatase 25), acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT4G36350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47217.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Purple acid phosphatase-like, N-terminal; (InterPro:IPR008963); contains InterPro domain Purple acid phosphatase, N-terminal; (InterPro:IPR015914); contains InterPro domain Fibronectin, type III (InterPro:IPR003961) Range:  from: 21102268    to: 21104507    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g56380.1    Description:  mitochondrial transcription termination factor family protein / mTERF family protein. similar to mitochondrial transcription termination factor family protein / mTERF family protein [Arabidopsis thaliana] (TAIR:AT1G62110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40592.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 21105039    to: 21106366    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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