Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ANAC58                     --------->ZAT14                                                   --------->ANAC58                     <---------ZAT14                       <-------TEIL                --------->ANAC58                 --------->YAB1--------->ANAC58--------->ANAC46                      <------ZmHOX2a(1)           <-------MYC3   --------->ZAT18      <----------ID1             --------->ARR14(2)           ------->MYC3   <---------ZAT18      --------->ANAC58           --------->GLK1(2)  <-------TEIL ------->TEIL    --------->ANAC46--------->ANAC58           <---------ARR11(3)      <--   caagtacatagcacatgaatcagtatagtgaacaagtcacaagtctaataagccaaaatgatacatctctgttcaaaatctgaacgaggaagcaattcaa  19860200                                   <---------ANAC46                               ------>ZmHOX2a(2)                              --------->CCA1(2)                              <------ZmHOX2a(2)                        <---------ZAT6                             --------->ARR14(2)          --------->RAP2.6(2)                             <---------ARR11(3)        --------->At4g35610                             <---------ARR14(2)        <---------At4g35610                             --------->AGP1      ------>MYB46(1)       --------->ALFIN1                             <---------AGP1      ------>MYB83     --------->LBD16            <---------YAB1   --------->ARR11(3) ----------->RAV1(1) <------ZmHOX2a(1)   --------->DAG2           <---------CCA1(2)   =============================RAV  ---------->DOF2          ----------->ARR10  --------->MYB46(3) <---------LBD16   <---------ANAC46 -------ATHB12          --------->TOE2(3)  ----------->HVH21     <-----------RAV1(2)   atcaaaaagggattttgtttgtaatacctcagatctggtgttgatgtgaccaacatcagcagcaactccaggagtgttagcgatatcgtagagggagagg  19860300                                                                   <---------DEAR3(1)                                                               <---------TOE2(3)                                                            <------NtERF2                                                           ------>NtERF2                                                         <------NtERF2                                                         --------->ATERF1(1)                                                        <---------DEAR4(2)                                                        <---------ERF1                                                        <---------RAP2.3(1)                                                        <---------DEAR3(2)                      <----                                                        <---------ORA47(2)                     ------                                                        --------->RAP2.6(2)                  --------                                                        ------>NtERF2                        <------NtERF2                                                       --------->ATERF1(2)                   <-------                                                       <---------ATERF1(2)                  ------>NtERF2                                                       <---------RAP2.3(2)                  <--------                                                       <---------DEAR3(1)                  --------->ARR14(2)                                                       <---------RAP2.3(3)                 <---------ARR14(2)                                                     <---------ATERF1(1)               --------->SPL7                                                    --------->ATERF1(2)   <---------DAG2<---------DEAR3(1)                                                    --------->DEAR3(1)    <----------DOF2 --------->ATERF1(1)                                                    <---------ATERF1(2)------>NtERF2  ------>NtERF2          <------ZmHOX2a(1)            ----------->HVH21<---------ATERF1(1)          ----------->HVH21  --------->CCA1(2)       <------ZmHOX2a(1)        --------->DEAR3(2) <---------RAP2.6(2)<---------ATERF1(1) <----------ID1    <-------TEIL      --------->At4g35610<---------RAP2.6(1)       <---------LBD16  <-   gaagagacaagaggattaagcttcatgaggagagcaagaggctgaccaattccaccggcggcaccaaggatggcgactttacgctcggggacggagccgg  19860400                                                          --------->CCA1(2)                  --------->MYB46(3)                      <------ZmHOX2a(2)                --------->MYB52(1)                       --------->ARR14(2)                <---------ARR14(2)                       <---------ARR14(2)               <---------GLK1(1)                         <---------ARR11(3)               --------->GLK1(1)           <------ZmHOX2a(2)             <------NtERF2   <---------LBD16 <---------SPL7------>ZmHOX2a(2)    --------->HSFC1(2)  <---------ZAT2    --------->ARR14(2)    <---------HSFC1(2)  --------->ZAT2    <---------ARR14(2)   --------->ANAC58------->GAMYB<------NtERF2----------->HVH21   --------->ANAC58--------->DEAR3(1) <---------At4g35610--------->AGP1   ----------->ARR10 ----------->RAV1(2)  --------->ARR11(3) --NtERF2   <---------MYB46(3) --------->LBD16 --------->SPL7 --->LBD16<---------LBD16    <---------HSFB2a(2)         --------->ARR11(3) ->ATERF1(1)--------->LBD16  --------->HSFB2a(2)         <---------AGP1                         ----- --LBD16<---------DEAR3(1)<----------DOF2 <---------ARR11(3)                                    <---- -ATERF1(1)<---------ANAC46 <---------ANAC46------>ZmHOX2a(2)                                  <----- -----ZmHOX2a(1)--------->ARR14(2) <------NtERF2       ----------->ARR10      --------->At4g35610   aggagaagctacggcggataaccgcctgcttcgcggaggcagaagatcggacgagcatagatctgaacattttggcgatgagatgtctagggtttcttct  19860500                     --------->GLK1(2)                --------->MYB52(1)             <---------ZAT2                                        ----------->GT1             --------->At4g35610                          <---------YAB1             --------->ZAT2                               <---------TOE2(3)             <---------At4g35610                         <---------AHL20(2)           <---------ZAT14 --------->ANAC58              --------->YAB1       --------->DAG2--------->ARR14(2)                  --------->AHL20(2)    ---------->DOF2  <---------ARR14(2)                <---------YAB1   <------ZmHOX2a(1) ------->TEIL                   <---------AHL20(2)             --------->At4g35610 ---->HSFB2a(2)----------->HVH21                    <---------YAB1 <---------ANAC46<---------ZAT2 -----HSFB2a(2)----------->TGA1    ---------->DOF2  --------->AHL20(2)             --------->ZAT2 ----LBD16 --------->ZAT18 --------->ANAC58      <----------DOF2  --------->ALFIN1--------->GLK1(2)   ggagaggaaagagtgagctgacgaatctgaagcaatcgaaagaagaaaatgctttttattaatattatgtggtgaagactgaagaagctgggcgagacac  19860600                     <----------DOF2                ------>MYB83                                      --------->ARR11(3)                ------>MYB46(1)                        <---------AHL20(2)              <---------ALFIN1                         --------->AHL20(2)              --------->AtMYB61         --------->ARR11(3)        <---------GLK1(2)              --------->DEAR3(1)   <-----------HVH21  <---------AHL20(1)              <---------MYB111(2) <----------DOF2     --------->AHL20(2)             --------->MYB46(3)   ------>ZmHOX2a(1)   <---------AHL20(2)<---------ANAC46      --------->CCA1(2)         <---------ICU4  --------->ANAC55(2)    ---------->ID1     *TSS  --------->AtMYB61  <-----------GT1   --------->YAB1    <---------ARR11(3)     <---------ARR11(3)   --------->TOE2(3)    ---------->ID1   <---------TOE2(3)               -----     --------->ARR11(3)   <----------DOF2  <----------DOF2      <---------TOE1(3)               <----   tcgatgagatataccaccaccctctttactttaatcctttcaggtctttttcgtaatttaatttttaagatttttcgtctaatttgtttttgattttagg  19860700                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                               <-----                                                                                               <-----     <---------ICU4                                                                            ------   --------->GLK1(2)                                                                           ------   <---------ARR11(3)        <---------AHL20(2)                         --------->YAB1        <------   --------->ARR11(3)        <---------AHL20(1)                    <---------AHL20(2)     -----------  --------->CCA1(1)          --------->AHL20(2)         --------->ZAT2 <---------ATHB12   ===========  --------->RVE1(1)          --------->AHL20(1)         --------->At4g35610         --------------->AtSPL8 ------>GT1         <---------ZAT6                      <---------At4g35610         --------------->AtSPL3 ------ID1          <---------ANAC46    <---------AHL20(2)   --------->YAB1    --------->YAB1 -------   gaaaaaatctttacacattgtggtgttcaaatttattccgatttttttgggtctcttcagctctcatatttcaatgataaatcaaaaccgtactaaataa  19860800       ------->TEIL             <---------ZAT14       <-------TEIL             <-------TEIL ------->AHL20(2)               <---------ZAT18 --------AHL20(2)               --------->ZAT18 ------>AHL20(2)             <---------ANAC58 -------AHL20(2)             <---------ANAC58                                         <----------DOF2 ----AHL20(1)               --------------->AtSPL8                                    <---------DAG2 ----AHL20(2)         <---------------AGL15                                         ------->TEIL --->AHL20(1)         --------------->AGL15                                       --------->ZAT18 --->AHL20(2)        <-----------------AGL1                                       <---------ZAT18 ---AHL20(2)   <---------ARR11(3)                                               --------------->AtSPL8 ---->AGL15    --------->ARR11(3)   <----------DOF2                             <---------------AtSPL3 =====================================MADS_MADS                                 <---------------AtSPL8 -->AHL20(2) ----------->GT1<---------------AtSPL8    ---------->DOF2       ---------->DOF2<---------   attaatatgtacatgaagataatactcatttgggtacactttcgagtttatagtagtaaagagagagaacctctaaaacaaaggtgtactttactttgaa  19860900                                                         <---------ZAT18                             --------->ICU4   --------->DEAR3(1)                 <---------TOE2(3)           --------->ANAC58          ------>ZmHOX2a(1)              <---------AHL20(2)             --------->ANAC58         --------->TOE2(3)        ----------->GT1    --------->YAB1    --------->ANAC46         --------------------->WRI1  --------->At5g28300      ---------->DOF2  <---------At5g28300       <---------ANAC58 ----------->GT1 <---------TOE1(3)--------->MYB59       <---------ZAT6<---------ANAC58 -DOF2  --------->YAB1  --------->YAB1   <-----------HVH21       <---------At4g35610   atagggtaaattgtaatttaaggtattaataaagattaggcccattcacggcccattagtgttcttcatcttccttatctgtttctcccgctctctctct  19861000                                                                                        <----------DOF2                                                                                  ----------->GT1                               <---------ZAT14                             <---------------AGL15                               <---------ZAT18                             --------->TOE2(3)                               --------->ZAT18                             --------->TOE1(3)                               --------->ZAT14                             --------------->AGL15                             <---------At4g35610                          ----------------->AGL1                             --------->At4g35610                          ----------------->AG                           <---------DEAR3(1)                             ----------------->AGL3                           <---------RAP2.3(3)            <----------DOF2 <-----------------AGL1                      <---------ANAC58         <<<<<<<<<TBF1 <---------ANAC46  ---------->DOF2                      <---------ANAC58   <<<<<<<<<TBF1   <---------ANAC58 <-----------------AGL3                   *TSS  --------->ARR14(2) <<<<<<<<<TBF1<---------ANAC58 ----------------->AGL2   ctctctctctctctctctctctcttcgtgtctgcgcactcttcttcttcttcttcaatggctttcgcgtttgagaaaccataaaaggaaacttttcagag  19861100  Previous    Next  AGI:  At1g53240.1    Description:  malate dehydrogenase (NAD), mitochondrial. Identical to Malate dehydrogenase 1, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q9ZP06;GB:Q8LBB9;GB:Q9MAH7); similar to malate dehydrogenase (NAD), mitochondrial, putative [Arabidopsis thaliana] (TAIR:AT3G15020.1); similar to Malate dehydrogenase, mitochondrial precursor (GB:Q43744); contains InterPro domain Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal; (InterPro:IPR015955); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Malate dehydrogenase, NAD-dependent, Range:  from: 19858283    to: 19860605    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g53250.1    Description:  endonuclease. similar to endonuclease [Arabidopsis thaliana] (TAIR:AT1G53800.2); similar to endonuclease [Arabidopsis thaliana] (TAIR:AT1G53800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39381.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66607.1); contains InterPro domain Intron-encoded nuclease 2; (InterPro:IPR003611) Range:  from: 19861019    to: 19862924    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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