Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------YAB1                                                <------                           ------>ZmHOX2a(1)                                                  -------                       --------->ARR14(2)                                                     ------- -------GLK1(2)        --------->ARR11(3)               --------->AHL20(1)               <---------ANAC58 -----ARR11(3)         <---------ARR14(2)  --------->ANAC55(2)       <---------AHL20(2)  <---------ANAC46 ---->ARR11(3)     --------->AHL20(2)      <---------ANAC55(2)<---------TOE2(3)          <---------ANAC58 ----CCA1(2)       <---------AHL20(2)     --------------->AtSPL8  ------->TEIL      <---------O2   tattctccaatatacacatatttaaaatcctcttactattagactacgtactacaaaatatactaatgtatataaacagagaaatcacatggcttgtgga  19834700                   <---------YAB1                 -------->HAHB4                 --------->YAB1                 <--------HAHB4                 <---------ICU4                 -------->ATHB1                 --------->ATHB51                 <---------AHL20(2)                <---------ATHB51                <---------YAB1                                                                  <----             <---------AHL20(2)                                                                 -----     <<<<<<<GRF7--------->ICU4         <---------ATHB12                                         -----   ----------->HVH21                 --------->WOX13(1)                                      ------->TEIL   ------>ZmHOX2a(1)   <-----------HVH21--------->YAB1                      <---------MYB46(3)  <---- ---ZAT14    --------->AHL20(2)   --------->ANAC58            <---------AHL20(2)          --------->ANAC55(2) -->ZAT14   <---------WOX13(1)    --------->ANAC58       <----------DOF2<---------YAB1    <---------ANAC55(2) -->ZAT18 --------->ATHB12      ---------->DOF2       ------->TEIL   <---------YAB1 --------->ICU4  <   ctgtcctgacattgattaattattatgtcatcgcttaagcaatcatagttttgttgaatctttttttatttcttatagttgttgccaaaattatgtattt  19834800                                                                                      <---------AHL20(2)                                                                                  <---------YAB1                                                                                --------->ATHB51       <----------DOF2                                                          <---------AHL20(2)     ------>MYB46(1)                                  --------->WRKY12          <---------ICU4     ------>MYB83                                     <---------ZAT18           --------->AHL20(2)    <---------ALFIN1                                  --------->WRKY38(1)      <---------YAB1   --------->MYB46(3)                       --------->TOE1(3)                  --------->ICU4 <-----------GT1                            <---------------AGL15           <---------YAB1 -----AHL20(2)                              --------->TOE2(3)             --------->YAB1 ---->AHL20(2)                              --------------->AGL15         ----------->GT1 ---->AHL20(1)                             ========================================================== -----AHL20(1)                             ----------------->AGL3   --------->HSFB2a(2) -----------GT1          <-----------GT1 <-----------GT1            <---------HSFB2a(2)<---------AHL20(2)   tattacccactttagatacctctaattttacataagtttcaatataccttatatagttgactctattgctctagaattgtaattattttttattttgcaa  19834900                                          --------->ARR11(3)                                       --------->AHL20(2)                                     ------>ZmHOX2a(1)                                    --------->TOE1(3)                                 --------->ARR14(2)                                 --------->GLK1(2)                                 --------->ARR11(3)                   --------->ANAC58                                 <---------ARR11(3)                   --------->ANAC58                            --------->LBD16                           --------->ANAC46         <-----                        <---------At5g28300                    --------->ARR11(3)              ------                  <---------YAB1 <---------ARR14(2)            <---------AHL20(1)       --------->AHL20(2)                 <---------AHL20(1) --------->TOE2(3)          <---------ARR11(3)       --------->YAB1    --------------->AGL15  --------->LBD16--------->AHL20(1)   --------->AHL20(1)    --------->YAB1   ----------------->AGL2 <---------LBD16 <---------AHL20(1)   <---------AHL20(2)   <---------YAB1  -   ----------------->AGL3<---------LBD16  <---------ARR11(3)   --------->AHL20(2) --------->YAB1    =   ================================================================================================== ====================MADS_MADS ---------->TaMYB80 --------->AtLEC2  <-----------GT1 --------->ICU4<--   taagttccaatttcagcattatttttcaccgggaaaatccttaaaatattctatgcaaaatccaatatattcactccacatagataataataaaaaactt  19835000         <------------CBF        --------->ATHB51         <---------PCF2        --------->ATHB12         --------->ZAT18        -------->HAHB4           <---------ZAT18        <---------ICU4        --------->ALFIN1        <--------ATHB1       <-------MYC3       <---------AHL20(2)    ------->MYC3       --------->AHL20(2)   <---------O2       --------->ICU4       <---------TGA1a             --------->GLK1(2)       <---------ATHB51     --------->TGA1a            <---------GLK1(2) ----------AGL15            --------->O2     <---------AHL20(2) --------->AGL15        ----------------->AGL1       --------->LBD16 --------->DOF2         <-----------------AGL1      --------->HSFB2a(2)                            -- =====================================bZIP_DOF      <---------HSFB2a(2)                           --- ==========MADS_MADS    <----------------PIF3(2)   <---------LBD16       <------------CBF         <-- -------YAB1           ------>NtERF2        --------->AHL20(2)         <-------TEIL        ----------   ataaaagaaataattgaagaaaggctgcccatgtgggcacttccaaataaatctccagaatcgatgcttcaaatacattggatgtttactaaacaacaca  19835100                                        <---------ARR14(2)                                        --------->GLK1(2)                                        --------->ARR14(2)                                       <---------GLK1(1)                                ---------->DOF2        ------>ZmHOX2a(2)                             --------->ANAC46         <------ZmHOX2a(2)                            --------->MYB46(3)       <---------ARR14(2)                           --------->ANAC58     --------->ARR14(2)                           <-----------------AGL1    --------->ARR14(2)            <----------DOF2         *TSS  <---------MYB52(2)      --------->GLK1(1)<----------DOF2          --------------->AGL15 ------->CCA1(2)           --------->ANAC58 --------->LBD16           --------->ANAC58             -- ------>ARR14(2)       <---------ALFIN1<---------HSFB2a(1)            --------->ANAC46     --------->GLK1(2) -------ARR14(2)------->GAMYB----------->RAV1(1)<---------ARR14(2)    --------->ANAC58    <---------GLK1(2) ->RAV1(1)     --------->MYB46(3)  ----------->GT1   <---------ARR11(3)          <---------------AGL15   gatatgaacaaacttcaacaaacaaacacacccacaaaggaaaatccgaagacccgatctttgttataaaacacacaacttctctctttttagaatctct  19835200                                                                                     ================HOX2a_HOX2a                                                                                     ------>ZmHOX2a(2)                                                                                   --------->ARR11(3)                   <----------DOF2                                                 <---------ARR11(3)            <-----------GT1                           <---------ANAC55(2)      --------->YAB1           <-----------GT1                         <------ZmHOX2a(2)       --------->ATHB12       <----------DOF2                            --------->ARR11(3)     <---------ANAC55(2)  <------ZmHOX2a(1) -------->ID1  <----------DOF2          ---------->DOF2                  --------->ANAC55(2)<--------   tgtcttcttctttttaactttcttttgtaatctcttgtctgaaaaagaaatggatcatgtaagttcaagtgagttacttattgatgatcttcttgaggat  19835300                                                                -------->P                                                          --------->AGP1                                                          <---------ARR11(3)                                                          <---------GLK1(2)                                                          --------->ARR11(3)                                                          --------->ARR14(2)                                                          <---------ARR14(2)                                                         <---------At4g35610                                                        ----------->ARR10                                            --------->ARR11(3)------>ZmHOX2a(1)                                          <---------TOE1(3) ------>ZmHOX2a(2)                  ------                    <-----------GT1       <---------TOE2(3)<------ZmHOX2a(2)                   ------      <----------DOF2           <---------HSFB2a(2) --------->WOX13(1)                       -------- -TOE2(3)--------->HSFB2a(2)   --------->ETT(2)  <-----------HVH21         <<<<<<<<<TBF1     <-------   tactggttctttgagaacttatttacaagaaggtcgagaggcttaaggtattgtcactcagatccttacccctcttcttcttctacttcgacttctcctg  19835400                                   --------->HSFB2a(1)                              <---------HSFB2a(2)                              --------->HSFB2a(2)                                            ------>ZmHOX2a(2)                              --------->HSFC1(1)                                            <--------                         --------->HSFB2a(1)                                                ---------                         <------MYB83                                                       <------ZmHOX2a(2)                         <------MYB46(1)                                                   <---------ARR14(2)                         <---------HSFB2a(1)        <----------DOF2                        <---------AGP1                         <---------HSFC1(2)        ------>ZmHOX2a(2)                       <---------               <---------ARR11(3)  <---------HSFB2a(1)                                     --------->ARR11(3)               --------->ARR11(3)  --------->At4g35610                                    <---------CCA1(2)           <-------TEIL  --------->HSFC1(2)       <------ZmHOX2a(2)                       <------NtERF2 --->LBD16--------->GLK1(2)   <---------HSFC1(1) --------->ARR11(3)   <---------------AGL15--------->ARR14(2) >ZmHOX2a(1)   --------->ARR14(2)  --------->HSFC1(2)            <---------At4g35610      <---------ARR14(1) --->RAV1(2)   <---------ARR14(2)  <---------HSFC1(2)     <---------ICU4             --------->DAG2 --LBD16 <---------ARR14(2)   >>>>>>>ZML2        <---------ARR11(3)   --------------->AGL15<---------ARR11(3)   aaaaaatgggagattcagatattgggaaggttctagaagcttccacagggcgatctttaatcagggcatcttctatagatagtagagaaggcggatctca  19835500                --------->ARR14(2)        <---------bZIP60(2)                                                                     -----        <---------ANAC58                                                                     ------>ZmHOX2a(1)      --------->MYB52(1)                                                                     <-------     ----------->HVH21                                             <---------HSFB2a(2)       ========   --------->At4g35610                                             --------->HSFB2a(2)      ---------   <---------ZAT2                                                --------->AtLEC2           <--------   --------->ZAT2                                              <---------ANAC58             <--------   <---------At4g35610    --------->ICU4                       <---------ANAC58       --------->ARR14(2)  ------->TEIL <---------MYB52(1)                       <---------ANAC46              <---------ARR14(2) -GLK1(1)     <---------DEAR3(2)    <-------TEIL        <------MYB83               --------->ALFIN1 >GLK1(1)    <---------DEAR3(1) <---------TOE2(3)       <------MYB46(1)           <-------MYC3  <---- --ARR10<---------ANAC58---------->DOF2                --------->MYB59            ------->MYC3 <-----   gacgaagctgacgggccggttctctgaaaagattagggttcaagaacagagacaagttgggtcttccttgcagaagaaggaacatgtggttcttcctaaa  19835600  Previous    Next  AGI:  At1g53180.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15115.1) Range:  from: 19835109    to: 19836563    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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