Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <------NtERF2                                                                                <---------MYB52(1)                                                     --------->ANAC46          <-------GAMYB                                              <-----------GT1          <---------AHL20(2)  <---------YAB1             <---------ANAC58           <---------ZAT14                --------->AHL20(2) --------->AHL20(2)             <---------ANAC58           --------->ZAT14                <---------AHL20(1) <---------AHL20(2)             <---------ANAC46           <---------ZAT18            --------->AHL20(2)    --------->AHL20(2) ---------DOF2                          --------->ZAT18  --------->ARR14(2)   <-----------RAV1(1) ------------->AG            ----------->GT1 --------->ZAT14       <---------AHL20(2)    --------->YAB1   cctttttagtaattttcttggagtcgaattgaagtaaaattgtgcagtttacaacacagaattcgatatttaaaaaatttctgttggcgaattaaaattg  18403400                                                                                           ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                                <------ZmHOX2a(2)                                        <---------ARR11(3)                               <---------AGP1                                <---------AHL20(2)                                       <---------ARR14(2)                                --------->AHL20(2)                                       --------->ARR14(2)                             --------->MYB52(2)                                          <---------ARR11(3)                             --------->MYB46(2)                                          --------->AGP1          <-----------GT1    ----------->GT1     <---------ICU4                          <-----------ARR10      <--------HAHB4       <--------P <---------YAB1                         <---------GLK1(1)      --------->YAB1       <---------MYB52(1)   --------->ICU4            ----------->GT1--------->ARR11(3)     <---------YAB1       <-------GAMYB --------->ARR11(3)       ----------->GT1        <---------CCA1(2)   aaatactataattatccaaactttcttcggttagttaattaagatcagaaataatgtctaaatggcaaggttaatatggatatttgtatcagatctaatc  18403500                                                               <---------GLK1(2)                                                        <-----------HVH21                                                       ==========================================MYC_MYB                                                       --------->ANAC58                                                       --------->ANAC58                                                       --------->O2                                                       --------->ANAC46                                                       --------->ANAC55(2)                      -----                                                       --------->ANAC55(1)                  <--------                                                       <---------O2                      <-------GAMYB                                                       --------->TGA1a                  <---------MYB46(3)                                                       <---------TGA1a                <-------MYC3                                                      <---------TOE1(2) ----------->GT1--------->ALFIN1                           <------ZmHOX2a(1)         <---------ALFIN1   <---------MYB46(3) <---------MYB46(3)                       ---------->DOF2            ----------->HVH21<---------YAB1     <-------MYC2                   --------->ANAC58        ---------->DOF2    <---------At4g35610     ------->MYC3<--                   --------->ANAC58        ======================bZIP_DOF             ------->MYC2===     ---------->DOF2   ==========================================bZIP_DOF           ------->TEIL<----   ccatttttaaagaaaacaaacaaggcaaaggacacaatcagcgactaaagctctcacacgttacagcttcttattggttaaaaatgaacgtggttgtcag  18403600                            <---------AHL20(2)                          <---------YAB1                         --------->TOE2(3)                        <---------ICU4                        <--------HAHB4                                    --------->ARR11(3)                       <---------YAB1                  --------------->AGL15                        -                       --------->ICU4                  <---------------AGL15             --------->AHL20(1)                       <---------ATHB12             <-----------GT1      --------->RVE1(1)          -                     <---------ICU4      --------->ATHB12                --------->CCA1(1)          -                     --------->YAB1      <---------AHL20(2)       --------->ANAC58       --------->AHL20(2)     --------->ANAC55(2)--------->YAB1  --------->AHL20(2)      ---------->DOF2          <---------AHL20(2)     <---------ANAC55(2)--------->ATHB12--------->ICU4----------------->AG<---------ARR11(3)  ------- ---->At4g35610   --------->YAB1     <---------CCA1(1)=============================================== ---HVH21    <---------YAB1 ---------->DOF2     <---------AHL20(2)--------->ANAC58   --------->AHL20(2) -------------AGL15 --------->ICU4   <---------RVE1(1)----------------->AGL1    ------------>CBF    = =======================================================================MADS_MADS   --------->AHL20(2) -----At4g35610  <---------AHL20(2) <---------ARR11(3)----------------->AGL3>>>>>>>>>RAP2.2  --------   ctaaattaagtgactatgtttaataatcattaaaacgggatatttattagtttattaccaaaaaatgaaagcaaaatatctaaacaataaataaaataaa  18403700                --------->TOE1(3)         <------ZmHOX2a(1)        <----------ID1 --------------->AGL15 --------->TOE1(3) <-----------GT1              --------->HSFC1(2) <---------------AGL15                    <-----------HVH21                                      ---- ---------------->AGL2                 <---------ANAC58                                          <--- ---------------->AG                   <---------ANAC58                                  <-----------ARR10 ---------------->AGL1               <---------ARR14(2)               <---------CCA1(2) <---------At4g35610 -->AHL20(2) --------->DAG2        <---------MYB46(3)               <---------ANAC58    <---------ZAT2 ================MADS_MADS      ------------>AtMYB77        *TSS    <---------ANAC58    --------->At4g35610 ==================================================================================================== ->AHL20(2) ---------->DOF2--------->AHL20(2)   <---------HSFC1(2) ---------->ID1       --------->ZAT2   aaaccataagaggaaaaagcttaaccccttaaaatggcagttcgtgtcgaagctactacaaacacacttgtcgtctcttctctctctcgcagctcttctc  18403800                                                                                       ---------->ID1                                                                            --------->GLK1(2)                                                                            <---------ARR14(2)                                                                            <---------ARR11(1)                           ---------->DOF2                                  ------->TEIL                 --------->YAB1                                             --------->ARR14(2)          ------->GAMYB <------MYB83                                       <---------CCA1(2)     <---------At4g35610<------MYB46(1)                                 --------->HSFC1(1) ----------->AGL15      <---------ANAC55(2)          <---------MYB52(1) --------->HSFB2a(2)         - ------------AGL15<---------AHL20(2)            <-----------GT1         <---------HSFB2a(2)  <------- ============MADS_MADS --------->MYB59 <----------DOF2          <----------DOF2    <----------DOF2  <   tattttcagcaatcgcctataatattaggtaaagcttccttctttttgtttatccgttttcgttttcttttcttctcgaatctgtctttgtcttatcaca  18403900               <---------DAG2       <---------ZAT6                       --------->ARR11(3)       ----------->GT1                      <---------ARR11(3)   --------->ZAT14                         --------->CCA1(1)   <---------ZAT14                         --------->RVE1(1)  ----------->HVH21                   --------->YAB1 ---------->RAV1(2)          <---------ANAC58           <----------DOF2                       ------- ----GT1    <-----------GT1  <---------ANAC58         ---------->ID1        --------------->AGL15 ---------LBD16<----------DOF2       <-------TEIL<---------MYB52(1)         <---------------AGL15   -   tcccctgaagtgttatactttttttttttttgggtccgattcataatatctgttttgtcttttttttggttctatgttctaaatcaagtagtagtagtaa  18404000                                                                                                 ----                                                                                               ------                                                                                 --------->LBD16<----                          <------ZmHOX2a(1)                             <----------DOF2        <-----                        <---------TOE2(3)                              <---------ANAC58        <-----                      ---------->DOF2                                  <---------ANAC46        ------             ---------->DOF2                                           <---------ANAC58<----------DOF2   <-----------GT1   --------->AHL20(2)                            ------>ZmHOX2a(2)<---------ARR11(3) -->ICU4    ------>ZmHOX2a(1)     <----------DOF2                --------->ARR11(3) --------->GLK1(2) ---------->GT1      <---------AHL20(2)     <-----------GT1      <---------ARR11(3)<---------GLK1(2)   tgaagtaactattcctaaagaaattaaaggataagacttttttgtttttcttcttgagggtttgtgtgatcttgcttttactccagaatcttttatagat  18404100  <----------DOF2                                                                   <-----------GT1 -->ZmHOX2a(2)                   <---------TOE2(3)                          ------>ZmHOX2a(2) --->ARR11(3)            <---------WRKY38(1)                               <------ZmHOX2a(2) --ZmHOX2a(2)            <---------WRKY45                                 <---------ARR14(2) ----ARR11(3)            <---------WRKY12               <-----------GT1   --------->ARR14(2) ----AGP1 <-------TEIL  --------->WRKY18(1)      --------->TOE2(3)     <---------TOE1(2) --->AGP1--------->CCA1(2)---------->DOF2   ------>ZmHOX2a(2)        --------->TOE1(2)              <   ctatcttttagatacattcaagaatggtcaaagttatggattttgatccaatcttatatttctctctgaatccaaggatccaatttatactctctgtatc  18404200                                                                                       <----------DOF2                              <---------ANAC58                                  <---------DAG2                              <---------ANAC58                               ------>ZmHOX2a(1)                           <---------WOX13(1)                           --------->KAN4(2)                          <---------ANAC58                             --------->HSFB2a(1)                          <---------ANAC58                             <---------KAN4(1)   <---------                         --------->ATHB12                              <---------HSFB2a(1)<---------AtMYB61                     --------->ATHB12                          <---------AHL20(2)     <---------ANAC58           ------->TEIL<---------WOX13(1)        ---------->DOF2      ------->TEIL    <---------ANAC58 ---------ALFIN1    <---------YAB1          <----------DOF2    --------->AHL20(2)<----------DOF2  <--   acacacttctatgtatatgtttgtgattgattgcttctggctaaaactttataaagttttgacatttatatgaacgttcctgccttttgcttttggtctt  18404300  Previous    Next  AGI:  At1g49720.1    Description:  ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor. similar to ABF4 (ABRE BINDING FACTOR 4), DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT3G19290.1); similar to abscisic acid responsive elements-binding protein 2 [Populus trichocarpa] (GB:ABN58425.1); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) Range:  from: 18403760    to: 18406296    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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