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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
MYB46(3)
<------
MYB46(1)
<------
MYB83
--------->
ANAC46
--------->
GLK1(2)
<-----------
RAV1(1)
<---------
AHL20(2)
<---------
ARR11(3)
--------->
TOE2(3)
------->
TEIL
--------->
ARR11(3)
--------->
TOE1(3)
<------
<---------
YAB1
<---------
ATHB12
====================
RAV
<-
--------->
ICU4
--------->
ANAC58
--------->
ARR11(3)
<-----------
GT1
<-------
--------->
YAB1
--------->
ANAC58
----------->
GT1
<----------
DOF2
----------->
RAV1(2)
---------
ttccaaaaattatgaatttatagacgaaacaatgaagaaattgaaaaatctttgaaacgtcttttttagtaattaac
ctgaaattgttggtgagtaacgt
18369800
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ARR11(3)
<---------
AGP1
<---------
ARR14(3)
--------->
ANAC58
--------->
ANAC55(1)
--------->
ANAC46
<---------
ARR14(2)
--------->
AHL20(2)
--------->
AGP1
--------->
ARR14(2)
<---------
AHL20(2)
<-----------
ARR10
<---------
GLK1(1)
--------->
AHL20(1)
--------->
ARR14(3)
--------->
ARR11(3)
----------->
GT1
--------->
ANAC58
---
ANAC46
--------->
ANAC58
--------->
ANAC55(2)
--------
TOE2(3)
------->
TEIL
--------->
AHL20(2)
<---------
ANAC55(2)
--
TOE2(3)
--------->
GLK1(1)
--------->
ANAC58
<---------
AHL20(2)
<---------
CCA1(2)
>
MYB52(1)
<---------
ANAC46
--------->
MYB52(1)
--------->
AHL20(2)
--------->
YAB1
--------->
ICU4
tgagatttcggtttcggagatttcatgagc
ctgaaaacggaaacaaaattaattaatccaaaaaaacgtaatcagatcttgctcagagagcatttattgt
18369900
------
------>
ZmHOX2a(2)
<-----
--------->
CCA1(2)
<------
<------
ZmHOX2a(2)
--------
--------->
AGP1
<-------
<---------
AGP1
<-------
<---------
ARR14(2)
--------
--------->
ARR14(2)
<---------
At4g35610
--------->
ARR11(3)
--------->
MYB52(2)
<---------
ARR11(3)
<---------
MYB52(1)
<---------
CCA1(2)
--------->
TOE2(3)
--------->
HSFB2a(2)
<---------
ANAC58
<-----------
GT1
<---------
ANAC58
-
gaaacagagaaatttcaaaatttgtaatctcgagtttcgaaatttcac
ctccagatctgaaaatggaagacgagtagcgatttcgttagtttcgctgctg
18370000
--------->
At4g35610
<---------
ARR14(2)
--------->
ARR14(2)
--------->
GLK1(2)
<---------
ZAT2
<---------
ARR14(2)
-------->
P
--------->
ARR14(2)
--->
HSFB2a(2)
<---------
At4g35610
----
HSFB2a(2)
--------->
At4g35610
--------->
At4g35610
---
ANAC46
<---------
ANAC58
--------->
At4g35610
<---------
HSFB2a(2)
->
ZAT2
--------->
At4g35610
<---------
At4g35610
--------->
HSFB2a(2)
--
At4g35610
<---------
ANAC58
------>
ZmHOX2a(2)
<---------
DEAR3(1)
<---------
GLK1(2)
--
ZAT2
<---------
At4g35610
<---------
ARR11(3)
--------->
MYB52(1)
--------->
LBD16
->
At4g35610
<---------
YAB1
--------->
ARR11(3)
---------->
DOF2
--------->
ANAC46
--------->
ANAC58
-------->
MYB46(3)
<---------
At4g35610
<<<<<<<<<
TBF1
----------->
HVH21
<---------
LBD16
--------->
ANAC58
gaacaaccagagctgatgcttgagcttagatgatcgtcttcttcttcagataacgcgacggagcagaaacctccggaatctgaaaccgagtaagccagag
18370100
<---------
YAB1
--------->
YAB1
<---------
ICU4
--------->
TGA2(2)
<-----------
TGA1
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
<-----------
STF1
<---------
DEAR3(2)
<---------
ICU4
----
<---------
MYB46(3)
--------->
YAB1
------>
ZmHOX2a(1)
---------->
DOF2
----------->
GT1
<---------
YAB1
------>
ZmHOX2a(2)
>>>>>>>>>
TBF1
----------------------->
TaNAC69(2)
<---------
YAB1
<----
>>>>>>>>>
TBF1
<---------
DEAR3(1)
--------->
ICU4
=====================
HOX2a_HOX2a
<------
ZmHOX2a(1)
<---------
At1g77200
<---------
YAB1
------>
ZmHOX2a(1)
--------
aagaagaggaagaagaagaaagagttctcgtcggtgagcgtaaaacgtcatcatcatcatcgagtctcatcctcttgatgtttgatccttcgtactcaga
18370200
<---------
TOE1(2)
--------->
ALFIN1
----->
GLK1(2)
--------->
DAG2
---------
-----
GLK1(2)
<---------
YAB1
<---------
YAB1
>>>>>>>>>
GT-1
->
YAB1
<---------
CCA1(2)
<---------
LBD16
---------->
DOF2
----------->
GT1
atctctcttgggttttgtttcgctcat
ttctctcaagctcattatagttttctctggagagagtttatgaaaaagttggggtttctctggttaataaaaa
18370300
<---------
ANAC46
----------
----------
--------->
ATHB51
------>
ZmHOX2a(2)
-------->
HAHB4
<------
ZmHOX2a(2)
-------->
ATHB1
<---------
ARR11(3)
<---------
AHL20(2)
<---------
ARR14(2)
<---------
ICU4
<---------
AGP1
<---------
AHL20(2)
--------->
ATHB12
--------->
ARR14(2)
<---------
YAB1
--------->
GLK1(2)
<---------
ATHB51
--------->
At4g35610
<---------
WOX13(1)
--------->
ICU4
<------
ZmHOX2a(1)
<---------
MYB46(3)
--------->
AHL20(2)
====================
HOX2a_HOX2a
--------->
At4g35610
<---------
ANAC58
<---------
ARR14(2)
--------->
ARR11(3)
--------->
MYB46(3)
<---------
ANAC58
--------->
ARR14(2)
<---------
REM1(1)
<---------
MYB52(1)
<---------
AHL20(2)
<------
ZmHOX2a(1)
<---------
LBD16
<------
ZmHOX2a(1)
--------->
AHL20(2)
--------->
AHL20(2)
<--
>
YAB1
<---------
ANAC46
===================
HOX2a_HOX2a
--------->
MYB52(1)
<------------
CBF
<---
cagaggaagggttttgggtatttgggggagaggaagatgaaggatctagagccgttgattaattcaacggctgagatttaattattgggccttgcctata
18370400
<--
<--
<---
<---------
LBD16
<---
--------->
MYB52(1)
-----
----------->
HVH21
------
<---------
MYB52(2)
------
--------->
ANAC58
<---------
ANAC55(2)
<---------
MYB46(3)
<---------
ANAC58
--------->
ANAC58
--------->
ANAC55(2)
<---------
MYB52(1)
<---------
PCF2
<-----------
RAV1(2)
<-----
<-------
GAMYB
<---------
ANAC58
<---------
LBD16
<---------
MYB52(1)
----
<---------
MYB46(3)
--------->
ALFIN1
--------->
LBD16
<------
NtERF2
------>
NtERF2
<---------
ARR14(2)
<---------
ANAC58
<---------
LBD16
------>
NtERF2
<---------
ATERF1(1)
--------->
ARR14(2)
<---------
ANAC46
<---------
DOF5.7(2)
<---------
DEAR3(1)
<------
------->
AGL1
<---------
ANAC58
<---------
REM1(2)
<---------
ANAC46
<---------
ARR14(2)
------->
AG
<---------
YAB1
<-----------
HVH21
<---------
DOF5.7(2)
--------->
ARR14(2)
-------
ANAC46
<---------
ANAC46
<----------
DOF2
--------->
DOF5.7(2)
--------->
DEAR3(1)
--------
------
LBD16
<---------
LBD16
------>
ZmHOX2a(1)
----------->
HVH21
------->
GAMYB
<---------
ANAC46
gcggatgggccgttgttgtgccggttttgagtggggtcctttaaactgagtcccgttcacggggaagcaggtaacggcgtcgttacggagcgtagacgcc
18370500
--------->
GLK1(2)
------->
GAMYB
--------->
ARR14(2)
--------->
ANAC58
--------->
GLK1(1)
--------->
ANAC58
<---------
ARR14(2)
---------->
DOF2
<------
NtERF2
<----------
DOF2
-------
MYB52(1)
<---------------
AGL15
----
NtERF2
<-----------------
AGL3
------
SPL7
<---------
At4g35610
--------
HVH21
<-----------
GT1
-------->
P
---->
DEAR3(1)
<---------
MYB52(1)
--------->
ANAC58
--->
RAP2.3(1)
<---------
RAP2.6(3)
--------->
ANAC46
--->
ATERF1(1)
--------------->
AGL15
--------->
ANAC58
-
NtERF2
<-----------
GT1
----------------->
AGL3
-->
NtERF2
<----------
DOF2
--------->
At4g35610
--------->
At4g35610
---
ATERF1(1)
------>
NtERF2
=============================
MADS_MADS
---------->
DOF2
---
->
ANAC46
--------->
ANAC46
---------->
ID1
--------------->
AGL15
------>
ZmHOX2a(1)
<------
gtcgggattctaaacgacgcgtcttttttgccgtttttagcttccttttaaagcaacccaaaactaaaacgtcgtcctataagctgtagaaatgtgagtt
18370600
<-------
TEIL
----------->
GT1
--------->
ANAC58
--------->
ANAC55(1)
--------->
ANAC58
<-
<---------
ANAC55(2)
<-------
--------->
At5g28300
--------->
ANAC46
<-------
----------->
GT1
--------->
AHL20(2)
----------------------->
TaNAC69(2)
--------
-------->
HVH21
<---------
AHL20(2)
<---------
GLK1(1)
<----------
DOF2
--------->
YAB1
-
GAMYB
--------->
ICU4
<----------
DOF2
--------->
TOE2(3)
--------->
ANAC55(2)
--------->
AHL20(2)
gtgacagtaatttttgttaattaatctactttctactatagatttcttaaacttatattcttttacacgtaaatacatttgtcaaaacaaaaaaaataat
18370700
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AGI:
At1g49620.1
Description:
ICK5/ICN6/KRP7 (KIP-RELATED PROTEIN 7); cyclin binding / cyclin-dependent protein kinase inhibitor. Identical to Cyclin-dependent kinase inhibitor 7 (KRP7) [Arabidopsis Thaliana] (GB:Q94CL9;GB:Q9FX90); similar to ICK4/KRP6 (KIP-RELATED PROTEIN 6), cyclin binding / cyclin-dependent protein kinase inhibitor [Arabidopsis thaliana] (TAIR:AT3G19150.1); similar to unknown [Populus trichocarpa] (GB:ABK94864.1); contains InterPro domain Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); contains InterPro domain Cyclin-dependent kinase inhibitor; (InterPro:IPR003175)
Range:
from: 18369159
to: 18370227
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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