Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------YAB1                                                               --------->At4g35610                                                            --------->CCA1(2)                                                            <------ZmHOX2a(2)                                                           <---------ARR11(3)                                                           --------->AGP1                                                           <---------AGP1                                                           <---------ARR14(2)             <---------ICU4                                           ------->TEIL    --------->ARR14(2)            <---------AHL20(1)                                --------->YAB1             --------->ARR11(3)            --------->AHL20(1)                               <---------YAB1             <---------CCA1(2)           --------->AHL20(2)                         --------->TOE1(2) --------->ARR14(2)------>ZmHOX2a(2)   <---------AHL20(2)  <---------AHL20(2) <----------ID1     ===========================HOX2a_HOX2a   --------->AHL20(2) <---------ICU4   ---------->DOF2       ------>ZmHOX2a(1)----------->ARR10      --------->AHL20(2) -GT1 --------->AtLEC2<------ZmHOX2a(1) ============================HOX2a_HOX2a<---------YAB1       <   taatttttatgcaaacatggaaaaggacatgcgatgataatcctgaatctactagtgcttagatctgatgaatactggattattaaaaaaaaatattact  2737200                                      <-----------RAV1(1)                                --------->AHL20(2)                                <---------AHL20(2)                              <----------DOF2                           <---------AGP1                                             <---------At4g35610                           --------->AGP1 <---------At4g35610                         --------->At4g35610                           <---------ARR11(3)                                         <---------GLK1(1)                           --------->ARR11(3)                                <-------GAMYB            ------>ZmHOX2a(2)------>ZmHOX2a(2)                               <---------At4g35610          <---------ARR11(3)<------ZmHOX2a(2)                             --------->ZAT18          --------->ARR11(3)<---------RVE1(1)                             <-------TEIL--------->GLK1(1)         --------->YAB1    --------->ARR14(2)            <---------GLK1(1)<---------ZAT18        <---------ATHB12   <---------ARR14(2)     <-----------GT1         --------->ZAT14           < ---------ICU4            <---------CCA1(2)<---------ANAC46               <---------ZAT14   <--------   aaaaatttcaatgatctagggtttcttcagatctttaaatttgttgctgattttactcgatttctcttagtctgggtgcagttgatggagctccagctat  2737300                          ---------->DOF2                       --------->TOE1(3)      ------------>CBF --------->TOE2(3)                                                            -     ------>MYB46(1)--------->GLK1(1)                  <---------ICU4               --------->At4g35610     ------>MYB83  --------->ARR14(2)                 ------>ZmHOX2a(1)             <---------At4g35610 -----------GT1  --------->ANAC46           --------->ANAC58                 <---------YAB1 <------MYB46(1) -At4g35610  <-----------GT1  --------->YAB1--------->ANAC58          ------>ZmHOX2a(1)     <------MYB83   tttgaccatccaatttcaccagaaaccctaaatcacaagactatgtaagcattttccttatggctcttcttcctgatttttgattcagctaatttggtga  2737400                                                  ----------------->AG                                                 ------>MYB46(1)                                                 ------>MYB83                           <---------DAG2       --------->MYB55(1)                     --------------->AtSPL3    --------->MYB46(3)             --------->ARR11(3)          --------------->AtSPL8             <---------ARR11(3)   --------->LBD16-------->P                       <---------YAB1        ----------->TBP    <----------DOF2     <---------MYB111(2)        <---------YAB1      --------->AHL20(2) <---------TOE1(2)     <---------MYB46(2)      <---------YAB1      <-----------TBP--------------->AtSPL8    <---------MYB59<---------ANAC46 <---------AHL20(2)  <-    <---------MYB52(1)--------->YAB1     <---------------AtSPL8        <---------AHL20(2)         ---  ----------->GT1    <---------------AtSPL3  ------->TEIL <-----------HVH21 <---------AHL20(2)   <--- ------>TEIL<---------CCA1(2)   <---------LBD16<---------MYB111(1)    <---------AHL20(2)         <---   tgaaccgtttatatatatctgtaatcgtactttaccctgaaaatatgtacctaccatatgtgtcatgtgtatttttattattttataaatggttgtgata  2737500                                                                                   ---------->DOF2                                                                          <---------ARR14(2)      ---        <---------YAB1                                                    <-----------ARR10      ---- -----------CBF           <------------CBF                                --------->ARR14(2)     <--- ------>ATHB12         ------------>CBF                                   --------->GLK1(2)    ------ ------AHL20(2)    <---------YAB1    <---------ZAT6                      <---------GLK1(2)--------->ARR11(3) ------YAB1      --------->YAB1      <-----------RAV1(1)              --------->YAB1      <---------ARR11(3)   ttattgagacatgaatgaatgatgcttcaattgtatgtagtgttggcacagaagtaatggggacagagctaatgagaatctgtgtgaaagaagatagtga  2737600                                             --------->TOE2(3)                                             --------->TOE1(3)                                             <---------------AGL15       <---------At4g35610       --------->ANAC58  <-----------GT1            --------->YAB1  --------------->AGL15                           ------>ZmHOX2a(1) ------>ATHB12    --------->LBD16--------->ANAC58                                <----------ID1 ----->ICU4       ------>ZmHOX2a(1)       <-----------GT1                       --------->DAG2 ------YAB1     ----------->RAV1(2)    <----------DOF2                         ---------->DOF2 --->YAB1      ------>ZmHOX2a(1) --------->ANAC46 ---------->DOF2          <---------YAB1  ----------   tgatttgccatctgttcctcctggttttgaatcatatgcaacttttaccttaaaaagagtagtccctgctactacttctgataaagccaagactcctgca  2737700                                                                                --------->ARR11(3)                       --------->ANAC58                                         <---------ARR11(3)                       --------->ANAC58                                       <---------ETT(2)                   ------>MYB46(1)                                            --------->WRKY12                   ------>MYB83                             --------->ZAT2 <---------ANAC46       <--                 ------->GAMYB                           <---------At4g35610--------->LBD16  --------        <---------ARR14(2)                               <---------ZAT2    --------->DEAR3(1)<-------        --------->ARR14(2)                     <---------REM1(1)         ------>NtERF2      <-------- ---------->DOF2--------->MYB46(3)           --------->At4g35610        --------->ANAC46    <-------- ->RAV1(2) --------->HSFB2a(2)           ------->TEIL ---------->DOF2 <---------ALFIN1    --------->YAB1   attgaaagtgtttctgcaaccgaacaagctaagatggaagttgaatctgatgaagccaaagctgctcgggctctacgccgtagaccttggattaatcata  2737800                 <---------MYB46(3)          <---------YAB1                              --------->ARR11(3) --------->ARR14(2)                                   <---------ARR11(3)           <---------DAG2 <---------ARR14(2)                                   <---------ARR14(2)           <----------DOF2 -------ANAC46  <---------YAB1     --------->YAB1     --------->ARR14(2) <----------DOF2     ------>ZmHOX2a(1) ->YAB1   --------->ICU4     --------->ANAC58  <---------At4g35610      --------->MYB52(2)   -------- --ICU4<---------YAB1        --------->ANAC58  --------->At4g35610    <---------MYB52(1)    <-------- -YAB1 --------->ICU4  <---------At4g35610    ------->TEIL------>ZmHOX2a(1)       <---------ANAC58 -ATHB12--------->YAB1 --------->At4g35610   --------->REM1(1)     <-------TEIL   <---------ANAC58   gcggatgtgatgatgatggtgattgtgctgcaaacaatgacaatgctgcatctcaaaatcctgatcaagttcgttctttgttttgctttttattcctggc  2737900                                         <---------AtLEC2                                   <---------ANAC46                         <---------ARR11(3)                                   <---------ANAC58                        <---------At4g35610                               <---------ANAC58                            --------->At4g35610   <---                          <---------ANAC58                                 <---------ZAT2      <-----                          <---------ANAC58                            --------->ANAC58       <-------                      <----------DOF2  <---------YAB1            <---------ANAC46          --------->ALFIN1 ->LBD16          <---------CCA1(2)<---------ANAC58      <---------GLK1(2) --------->ZAT2  <---------AtMYB61 -LBD16     <----------DOF2    <---------ANAC58     <-----------GT1   --------->ANAC58   --------->ALFIN1   aacttgtgtttcaactttccatctctttgtttgccttgcttatgcatggtgttgttacagaattgtgatgtgaagccagctcttccaaagggtgtggtca  2738000                     <-----------HVH21                  <---------GLK1(2)                  --------->HSFB2a(2)                --------->ICU4                <---------ANAC58                  <---------ANAC58 ------At4g35610<---------YAB1                <---------ANAC58                  <---------ANAC58 ------RAV1(2)---------->DOF2      --------->TOE2(3) <---------HSFB2a(2)   <----------DOF2         <- ----HVH21 ----------->GT1  ----------->GT1 <---------YAB1           <-----------GT1               --   ggggatgtgaagaatgtaaagattgtcagaaggttaatctcagttaatgcttgtttcagaaataaacttataaacgtctttcgcttgagcattagatgtt  2738100  Previous    Next  AGI:  At1g08620.1    Description:  transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein. similar to transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein [Arabidopsis thaliana] (TAIR:AT4G20400.2); similar to transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein [Arabidopsis thaliana] (TAIR:AT4G20400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65074.1); similar to hypothetical protein OsI_018095 [Oryza sativa (indica cultivar-group)] (GB:EAY96862.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40616.1); contains InterPro domain FY- Range:  from: 2737557    to: 2743727    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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