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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<
--------->
ATHB51
<
--------->
ATHB12
<
----------->
HVH21
<---------
YAB1
<-----
<----------
DOF2
--------->
ZAT14
<---------
ICU4
<-----
<---------
YAB1
<-----------
GT1
--------->
At4g35610
--------->
ICU4
<---------
TOE2(3)
-----------
GT1
<----------
DOF2
<---------
ICU4
<---------
YAB1
<---------
YAB1
<
aattacgattcaaaactctttttttctttattctttcgaatcagtgctgcatttgacatgttcaaaacatgattctacttattattgactattgaggtcg
75200
----------->
GT1
<---------
ZAT6
---------
ANAC58
<-------
TEIL
--------->
AHL20(2)
---------
ANAC58
<-------
GAMYB
--------->
ICU4
<---------
AHL20(2)
---------
bZIP60(2)
<---------
ANAC58
---------->
DOF2
<-------
TEIL
----
ANAC58
<---------
YAB1
--------->
At5g28300
--------->
GLK1(2)
----
ANAC58
--------->
TOE2(2)
----------->
GT1
<---------
GLK1(2)
<---------
YAB1
----------->
GT1
---------
ANAC46
<---------
ANAC58
--------->
ANAC46
<---------
TOE1(2)
----------->
GT1
tgtcgtgttataacatatgatttcgttggaaaactgtaaatacactaaagattagagattcgtagtttcatttattaataggtctaggggagttaaataa
75300
>>>>>>>>>
ARR2
<------------
CBF
--------->
LBD16
---------->
DOF2
--------->
ATHB12
--------->
ANAC46
<---------
TOE2(3)
<---------
YAB1
--------->
ANAC58
<<<<<<<<<
WRKY18
<---------
ATHB12
--------->
ANAC58
--------->
WRKY18(1)
--------->
ARR11(3)
------
gtttttgttttatatggtttttctaaactcataaaacccgaaatacagaatgaattaagtcaaggattaaagcaaatgattttgattgtaaatgactaca
75400
--------->
O2
--------->
DAG2
<---------
ANAC46
============================================
bZIP_DOF
--------->
ANAC55(2)
<---------
O2
<---------
ANAC55(2)
<---------
bZIP60(1)
--------->
ANAC58
--------->
TGA1a
--------->
ANAC46
<---------
TGA1a
--------->
ANAC58
--------->
ANAC46
<---------
HSFB2a(2)
===========================
HOX2a_HOX2a
--------->
HSFB2a(2)
<---------
AHL20(2)
---
--------->
HSFC1(1)
--------->
AHL20(2)
----
<----------
DOF2
--------->
AHL20(1)
<----
<---------
ANAC58
--------->
AHL20(2)
<------
ZmHOX2a(2)
-----
<---------
ANAC58
----------->
GT1
<---------
AHL20(1)
--------->
ANAC46
------->
TEIL
--------->
ANAC55(1)
--------->
AHL20(2)
------>
ZmHOX2a(1)
<-----------
GT1
<---------
REM1(1)
---------->
DOF2
<---------
AHL20(2)
------------>
CBF
<---------
AHL20(2)
--->
REM1(1)
<---------
HSFC1(1)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
TOE2(3)
<-----------
GT1
tcacatgtagctttctagacacgtaaagtcaaataaatacaaataaattagatcacgacgtgagcaatttccttatccgactgtatttaaacgtctcaac
75500
>>>>>>>>>
E2Fc
>>>>>>>>>
E2Fd
------>
NtERF2
--------->
LBD16
<---------
AHL20(1)
--------->
ANAC58
--------->
AHL20(1)
--------->
ANAC58
<---------
AHL20(2)
--------->
ANAC46
--------->
AHL20(2)
------>
ZmHOX2a(1)
--------->
MYB46(3)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
TOE1(3)
<---------
LBD16
--------->
AHL20(2)
----------->
TBP
--------->
TOE2(3)
----------->
HVH21
<---------
YAB1
--------->
AHL20(2)
------>
ZmHOX2a(1)
<-
------>
MYB52(1)
--------->
YAB1
<---------
AHL20(2)
<-----------
GT1
--
--->
GAMYB
--------->
YAB1
--------------->
AGL15
------------>
CBF
<-
-----
MYB52(2)
<---------
YAB1
--------->
TOE2(3)
--------->
TOE2(3)
--------->
YAB1
<---
---->
MYB46(3)
--------->
YAB1
<---------------
AGL15
--------->
YAB1
<---------
YAB1
------>
ZmHOX2a(1)
aaactgacccgccaaaataatcataaataaatttccataattcgaattatataaacttaataacaaaaacaattatccttccttaatcctattttgtttt
75600
--
----
------>
NtERF2
----
--------->
DEAR3(1)
<----
--------->
ANAC58
<----
==================
HOX2a_HOX2a
<----
------>
ZmHOX2a(2)
--------->
ANAC58
-----
<---------
ARR14(2)
--------->
ATERF1(1)
<------
<------
ZmHOX2a(1)
<---------
ATERF1(1)
<-------
=============
HOX2a_HOX2a
--------->
ANAC46
<-------
<---------
WRKY18(1)
------>
ZmHOX2a(1)
<---------------
AGL15
<-------
<---------
GLK1(2)
<---------
ICU4
--------->
ARR14(2)
----------->
HVH21
---------
--------
ANAC58
--------->
ARR11(3)
<-----------
ARR10
--------->
ANAC58
<------
NtERF2
------->
ANAC55(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ANAC58
<--------
--------
ANAC58
<---------
GLK1(1)
<---------
ARR11(3)
--------->
ANAC46
<---------
DEAR3(1)
--------
GT1
--------->
GLK1(1)
<------
ZmHOX2a(1)
---------->
DOF2
>>>>>>>>>
MYB2
-----
tacttgattcttcattctcagaaatcttgacc
atgaaggaggatcgtcgtcttcctcacaaacgcgacgccttccaattcttgaaaaccaaggctgcgta
75700
<---------
ATERF1(1)
------>
NtERF2
<---------
ZAT2
<---------
At4g35610
--------->
At4g35610
--------->
ZAT2
<-----------
RAV1(2)
<---------
YAB1
--------->
At4g35610
<-----------
TGA1
<---------
At4g35610
--------->
YAB1
--------->
YAB1
================
RAV
<---------
DOF5.7(2)
--------->
MYB46(3)
--------->
ZAT2
------->
DOF5.7(2)
-------->
P
<---------
At4g35610
----->
ANAC58
<---------
MYB46(3)
--------->
ZAT6
--------->
At4g35610
----->
ANAC58
<---------
MYB52(1)
------>
MYB83
<---------
ZAT2
--------->
DEAR3(1)
---
TEIL
<----------
DOF2
------>
MYB46(1)
=================
RAV
-----
TOE2(2)
--------------------->
WRI1
<---------
YAB1
===================
RAV
-----
TOE1(2)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
----------->
RAV1(1)
<--
-->
TEIL
------>
NtERF2
<---------
MYB111(2)
--------->
At4g35610
-------
---
SPL7
--------->
ANAC46
--------->
DEAR3(1)
--------->
ZAT14
------>
NtERF2
<-------
--
ANAC58
--------->
ANAC58
<---------
MYB46(2)
--------->
At4g35610
<------
NtERF2
<--------
--
ANAC58
--------->
ANAC58
<---------
MYB111(1)
<---------
At4g35610
--------->
ANAC46
--
ANAC46
------>
MYB83
------>
NtERF2
------->
GAMYB
----------->
RAV1(2)
--------->
At4g35610
------>
AtSPL8
------>
MYB46(1)
--------->
LBD16
--------->
MYB46(3)
<---------
ALFIN1
<-------
-------
AtSPL3
--------->
TOE2(2)
--------->
DEAR3(1)
-------->
P
----------->
RAV1(1)
<---------
At4g35610
---->
SPL7
--------->
TOE1(2)
<---------
LBD16
--------->
MYB46(3)
--------->
RAP2.6(2)
<-------
cgttatcgtcatagttctaacctacgcctttggttacttctccgcctaccactatcatcaaccgctgcagcagcagctgccaccgtctacgacagccgtg
75800
--------->
ATHB12
--------->
ANAC58
<------
NtERF2
--------->
ANAC58
--------->
LBD16
<----------
ID1
--------->
RAP2.6(2)
<----
-------
ARR14(2)
--------->
RAP2.3(2)
<----
-->
LBD16
--------->
LBD16
<---------
YAB1
--
ANAC58
<------
NtERF2
--------->
LBD16
<---------
MYB52(1)
---------------
TaNAC69(2)
<-----------------
AGL1
------>
NtERF2
--------->
ANAC58
--
ANAC58
--------->
TOE1(3)
<-----------
GT1
<---------
LBD16
--------->
ANAC58
<--
--
ANAC46
--------->
TOE2(3)
--------->
LBD16
--------->
LBD16
<---------
LBD16
<-------
GAMYB
gaaacgacaaaacctcaagtttgttcaatcgacaacttccgagttacgactccatgcggcaatcttgttccgccggaattgattcgccagactgttattg
75900
<---------
HSFC1(2)
--------->
HSFC1(2)
--------->
HSFB2a(1)
--------->
ARR14(2)
<-----------
ARR10
--------->
ANAC46
--------->
HSFC1(2)
<---------
LBD16
--------->
ANAC46
<---------
DOF5.7(2)
--------->
ANAC58
--------->
MYB52(1)
--------->
ANAC58
--------->
DOF5.7(2)
--------->
SPL7
<----------
DOF2
<---------
ALFIN1
------>
ZmHOX2a(2)
<---------
ZAT18
<------
ZmHOX2a(2)
--------->
ABI4(1)
--------->
ARR11(3)
<---------
SPL7
<---------
ARR14(2)
--------->
ZAT14
<---------
ARR11(1)
--------->
DEAR3(1)
<---------
AGP1
--------->
ANAC46
---------->
DOF2
<---------
SPL7
--------->
ARR14(2)
--------->
AtMYB61
------>
NtERF2
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
DEAR3(1)
--------->
LBD16
<------
MYB46(1)
<---------
CCA1(2)
<---------
ALFIN1
<---------
HSFC1(2)
<------
MYB83
<---------
ARR14(1)
--------->
SPL7
<---------
MYB55(2)
------>
NtERF2
--------->
ALFIN1
<-
-----
WRKY18(1)
--------->
LBD16
--------->
MYB46(3)
<---------
LBD16
<--------
P
<-------
-------
GT1
------->
GAMYB
<-------
TEIL
--------->
ANAC46
<---------
HSFB2a(1)
--------->
ALFIN1
---
-------
LBD16
<---------
ARR14(2)
<---------
GLK1(1)
--------->
HSFB2a(1)
<---------
TOE2(3)
<---
accggatctttaacggaacttctccgtacatcgatttcccaccaccgcacgccaagaagtttctccggccaaaaagaatcaaaggttggggatcatacgg
76000
-
-
-
-
-
--
<-
--
--
--
--
<--
<---------
ARR14(2)
---
--------->
ARR14(2)
----
<------
NtERF2
<-----
------>
NtERF2
------
<---------
RAP2.3(1)
------
<---------
DEAR3(1)
--------->
GLK1(2)
--------->
DEAR3(1)
<---------
ARR14(2)
------>
NtERF2
<---------
At1g77200
<----------
--------->
DEAR3(1)
--------->
ATERF1(1)
------->
TEIL
--------->
LBD16
<------
NtERF2
<---------
ARR11(1)
--------->
HSFB2a(2)
<---------
ATERF1(1)
--------->
ARR14(2)
--------->
HSFC1(1)
<-----------
HVH21
------>
ZmHOX2a(2)
<-----------
HVH21
<-----------
ARR10
<---------
HSFB2a(2)
<------
ZmHOX2a(2)
<------
NtERF2
<---------
ARR14(1)
<---------
MYB52(1)
------>
NtERF2
<---------
ARR14(2)
<------
NtERF2
<---------
CCA1(2)
-----
NtERF2
--------->
At4g35610
--------->
ARR14(2)
<---------
DEAR3(1)
<---------
ANAC58
--
LBD16
<---------
GLK1(2)
--------->
TOE1(2)
<---------
LBD16
------->
MYC3
------
--->
NtERF2
--------->
GLK1(2)
--------->
TOE2(3)
<------
NtERF2
--------->
ABI4(2)
<---------
ANAC58
------
PCF5
<-----------
ARR10
--------->
TOE2(2)
<---------
LBD16
------>
NtERF2
<-------
MYC3
------
ggccgttttcgagaatctaatccgccgagtcaaacctaagacgatcgtcgaagtcgggagttttctcggcgcgtcggcgatacacatggcgaatctcacg
76100
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AGI:
At1g01180.1
Description:
similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT5G19270.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77331.1); contains domain SSF53335 (SSF53335)
Range:
from: 75633
to: 77446
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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