Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------DAG2                                                                  <----------DOF2                                                              <---------ATHB12                                                             ------>MYB83                                                           --------->AtMYB61                       --         --------->TOE1(3)                                 --------->MYB46(3)                    <---         --------->TOE2(3)                              --------->ZAT6               ---------->DOF2       ------->TEIL                                  ------>ZmHOX2a(1)              <---------WRKY38(1)   --------->YAB1       ==================================HOX2a_HOX2a    ---------->DOF2<---------HSFC1(2) -------->WOX13(1)      ------>ZmHOX2a(1)          ------>ZmHOX2a(2)  --------->ANAC46  --------->HSFC1(2) -------ATHB12--------->MYB46(3)             <----------DOF2 ------>MYB46(1)        <---------WRKY45   atcaatctgaacctcaacaacttctccttcaataacctctgtctcttctttgatcctaacaccaatcgctttacgaaaagactgagtcaaagcttctgtc  26986200                                                <---------HSFC1(2)                                                --------->HSFB2a(1)                                   <---------ICU4                                   --------->YAB1      --------->ANAC46                             <                                  --------->ICU4<---------HSFB2a(1)                                 -      --------------->AGL15       <---------ATHB12     --------->ANAC58                         <----      <---------------AGL15     --------->WOX13(1)     --------->ANAC58 <---------SPL7         ------ --------->HVH21      <-----------GT1     ---------->DOF2       --------->ARR11(3)          <-------- -------DOF2--------->YAB1   ------>ZmHOX2a(1)  --------->HSFC1(2)  <-----------GT1         <--------   tttgacatctctaatgagaaaatttcacttcctgcaatcatcgcaaaaggagtttccaagccaagagatttcgccatacccattgcaatcgctgtcttac  26986300                <----------DOF2              --------->LBD16             --------->ANAC58             --------->ANAC58             --------->ANAC46                                                          <------NtERF2         <---------WRKY18(1)                                                         --------->ANAC46        ----------->HVH21                                                          --------->ANAC46        --------->WRKY38(1)                                                        <---------ANAC58    --------->LBD16                                                            <----------DOF2   <---------ANAC58                       <-----------GT1                      <---------DAG2       -   <---------ANAC55(1)                   <-----------GT1                   <---------RAP2.3(2)    ---   <---------ANAC58                --------->LBD16                         <---------DEAR3(1)     ---   <---------ANAC46               --------->ANAC58                        --------->ATERF1(1)   <----  <---------LBD16                 --------->ANAC58              <------ZmHOX2a(1)  <---------ANAC58-- ---------ARR14(2)                --------->ANAC46         ----------->HVH21 <------NtERF2     ------ -------->ARR14(2)             --------->ARR14(2)        <---------At4g35610<---------RAP2.3(1)------ -------------AGL1             <---------ARR14(2)        --------->At4g35610------>NtERF2<-----------HVH21 -->P  <--------P  --------->YAB1<---------LBD16       --------->YAB1    <---------ATERF1(1)   ------ -ANAC58--------->WRKY45      <---------ALFIN1        <---------ATHB12  --------->DEAR3(1)   -------- -ANAC58--------->WRKY12     ----------->HVH21      --------->YAB1     <---------LBD16------>NtERF2--   ccgttccgggttgacccgctattagaatagcccgacccgcgattttcccttctctaatcatctgaaggattacaccggcggctttacgcgccttcacttg  26986400          <---------LBD16   --------->AtMYB61 ------>MYB46(1) ------>MYB83                                                               --------->ARR14(2) -------->ORA47(1)                                                    --------->ZAT18 ----->ZAP1                                                           <---------ZAT14 ------>DEAR3(2)                                                     --------->ALFIN1 -----WRKY18(1)           <------NtERF2                            --------->ALFIN1 ------->DEAR3(1)      <---------LBD16                       --------->ALFIN1 --->WRKY12        <---------ZAT2                          <---------ANAC46 <---------ARR14(2) --->WRKY38(1)     --------->At4g35610                     <---------TGA1a  <---------GLK1(2) ----->HVH21       --------->ZAT2    <------NtERF2      ----------->HVH21 --------->DEAR3(1) ->ANAC55(2)--------->HSFB2a(2)   --------->ZAT18     <---------At4g35610 ----------->ARR10 ------->MYB46(3)  <---------At4g35610                ------>ZmHOX2a(1)  <------NtERF2   accgaccataccttcggaaacagctcgcggctcgagggcagagtcgagacctagtcctctgatgtgtgagtgtgcgccgattcgctcgactctggttaag  26986500                             --------->ARR14(2)                        ------>NtERF2                        --------->LBD16                       --------->ANAC58                     <------NtERF2                       --------->ANAC46                   --------->ALFIN1                       --------->ANAC58                   <---------DEAR3(1)      <---------TOE1(3)                    <---------ARR14(2)                    <---------ANAC46        <---------TOE2(3)                    --------->ARR14(2)                   <---------LBD16    --------->DAG2        <---------YAB1<---------LBD16        <---------ANAC58              ---------->DOF2        ----------->HVH21    <---------ARR14(2) <---------TOE1(2)     ----------->GT1     <---------TOE1(3) ------>NtERF2 <----------DOF2               <---------ANAC58   <---------------------WRI1<---------TOE2(3)   tcccgactctctgatagctttagttccgccatattcgattatcgtcttcgtgcgattgaggcggagggagaagagcaaaaagttaaggttttagggttta  26986600                                                                                                 ----                                                                                            <--------                    *TSS       ----------->GT1                                             --------->AHL20(2)                    --------->YAB1                                                         <---------AHL20(2)                   <---------ATHB12                                    <---------ARR11(3) <----------   --------->ANAC58--------->ICU4                                     <---------CCA1(2)   ===========   --------->ANAC58----------->TGA1                      ---------->DOF2  <---------YAB1  <---------YAB1 ---------->DOF2   ----------->HVH21     ------>ZmHOX2a(1)     <---------GLK1(1)        --------->YAB1   gagaaaagctacacaatggcaatgacgatgtaagagttaaatcctcttaacaagggcataaaaggaactcacaaatcttatagacgagaattataaattt  26986700                                                                            =========================                                                                   ----------------->AG                                                                   --------->TOE2(3)--------->LBD16                           ----------->GT1                         <-----------------AG                    <---------TOE2(3)                             ----------------->AGL2                 <---------YAB1                          --------->ICU4     <------ZmHOX2a(1)      <-               <--------HAHB4                            <---------YAB1     =========================               <---------ICU4                 --------->DAG2     ------->TEIL     <---------LBD16  ==    <-----------GT1---------->DOF2           ---------->DOF2 --------------->AtSPL8<---------LBD16 -- ------->GT1   -------->ATHB1     <-----------GT1<---------ARR11(3)--------------->AGL15          <-- -AHL20(2)     --------->ATHB51  --------->AHL20(2)    --------->YAB1     --------->MYB59         === -----AGL15   --------->ICU4 --------->AHL20(2)  --------->ARR11(3)<---------------AGL15         <--- ==================================================================================MADS_MADS     ----   agtaatatacccttgaattattaaagatgaagtaattaactcttagataaaggtctgtgataatttgaaccctaattaggaatttcagggattgcattgg  26986800          --------->KAN4(2)         <---------GLK1(1)        <---------ARR14(2)        <---------ARR11(3)        --------->ARR14(2)     ------>ZmHOX2a(1)     --------->LBD16                                                                               --    <---------LBD16                                                                                -- =====HOX2a_HOX2a                                                                                ---- ------TEIL  --------->TOE2(3)                                                                   <--- ====HOX2a_HOX2a                                                                                 <--- ===========HOX2a_HOX2a                                                          <-----------GT1 <--- ---->ZmHOX2a(2)                                                           <---------ICU4      ------ ----ZmHOX2a(2)                              <-----------ARR10             --------->YAB1      ------ ===========HOX2a_HOX2a                      --------->ARR14(2)            --------->ATHB12    ------ ------ARR14(2)                   <---------GLK1(2)          <----------DOF2   <-----------HVH21 <--- ----->ARR14(2)          <----------DOF2     <---------ARR14(2)           <---------YAB1      ------>ZmHOX2a(1)   atccatcctggatattcttagaactctctttggccagtttcttagcatttcttctcttcttgacttttctcgtcttatcattgtcaccgattagtcctac  26986900 ---->MYB83 ---->MYB46(1)                   --------->AHL20(2) ----->MYB46(3)                  <---------ICU4 ------MYB111(2)                 <---------AHL20(2) ------MYB59          <---------ANAC55(2) ------MYB46(2)       --------->ANAC55(2) >MYB83               --------->ANAC58                                     ------>MYB46(1) >MYB46(1)    <-----------HVH21 --------->ICU4    <---------HSFB2a(1)      ------>MYB83 -->P    ---------->DOF2   ----------->GT1---------->DOF2                 ----------->RAV1(1) ------MYB111(1)      --------->ANAC58  --------->ANAC46              <------ZmHOX2a(1)--------->MYB46(3)   caaacaaaaaataaagagtcagacgcgtaatgtaattaatacacaaaagagaacgtttgagtaatttgcacaggaccaacaatgagacaacaacttgatg  26987000                                              ------->MYC3                                          ------->TEIL                                          <-------TEIL                                       <---------ANAC55(2)                                       --------->ANAC55(2)                   ------->TEIL                                    --------->ARR14(2)                 --------->TOE1(2)               ---------->DOF2  ------>ZmHOX2a(2)                    <---------------AtSPL8        <-          <---------YAB1       <---------At4g35610                   --------->DAG2         ---------      <---------ARR11(3)       --------->At4g35610                   <---------------AtSPL3<---------ARR11(3)      <---------GLK1(2)       <---------ARR11(3)    <---------YAB1  ---------->DOF2        --------->ARR11(1)      --------->ARR11(3)      <---------AGP1  <-------MYC3      --------->MYB59        ---------->DOF2   agctagtagattttgattaaagtcaaacccttgatctgaatacgtacatgtgttatgaaatctagttagataaagtacgaatttttcccaaaagatttga  26987100  Previous    Next  AGI:  At5g67630.1    Description:  DNA helicase, putative. similar to DNA helicase-related [Arabidopsis thaliana] (TAIR:AT3G49830.1); similar to putative DNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD72453.1); similar to DNA helicase, TBP-interacting protein [Physcomitrella patens subsp. patens] (GB:EDQ55914.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80826.1); contains InterPro domain TIP49, C-terminal; (InterPro:IPR010339); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 26984607    to: 26986620    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g67640.1    Description:  unknown protein Range:  from: 26986772    to: 26987867    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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