Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ANAC58                                                       --------->ANAC58                                                       --------->ANAC46                                =========================HOX2a_HOX2a                                <------ZmHOX2a(1) <------ZmHOX2a(2)                             ============================HOX2a_HOX2a                             <------ZmHOX2a(1)   <---------ARR11(3)                         ================================HOX2a_HOX2a                          <------                         <------ZmHOX2a(1)       --------->AGP1             <---------HSFB2a(2)                  ---------->DOF2               --------->At4g35610         --------->HSFB2a(2) -----              <---------At4g35610          --------->ANAC58   --------->MYB52(1)           <---------YAB1 ----->GT1    --------->At4g35610          --------->ANAC58   ---------->DOF2              --------->ICU4   aaaattcagagaaggaagcagaaaggaggaaggaggagaagaagcatgccagatcaaacgaaaccaaaggagagttttcgagagagagacttgatgatga  26974800                                                                                                -----                                                         >>>>>>>>>TBF1                          <----       <---------ANAC46                           --------->MYB52(1)                            <----       <---------ANAC58                   <---------------------WRI1                           ------       <---------ANAC58            <---------YAB1--------->TOE1(2)                        >>>>>>>>>TBF1 ---YAB1                    <------ZmHOX2a(2)   <---------MYB52(2)                    <------ZmHOX2a(1) ----->DOF2         <-----------HVH21    --------->At4g35610>>>>>>>>>TBF1       --------->YAB1<------   aagctaattccttgtatagatgtgtcatagatcaaatgtgattcgctgaaacgaacgaagaagaagaagaccagagaggctagcataaggaagaagaata  26974900                                                        <-----------GT1                                                     <---------REM1(1)                                                    <-----------ARR10 ---->ARR14(2)                                  <------ZmHOX2a(1) -----ARR14(2)                                <---------TOE2(3)        <---------ALFIN1 -----ARR11(3)                           --------->ANAC58            *TSS --->GLK1(1)                  <----------DOF2 <---------TOE1(3)     <-----------GT1 ---KAN4(2)              <----------DOF2 --------->ANAC58 --------->ZAT6          --------->ARR14(2)   tccatagaaacgagaaacaaacttgagcttttcttttgtattcaagctaaggaagatgtaaccctatatttctccacattcacaaatttgcctcaagttt  26975000                       ------>MYB83                     <---------MYB111(1)                   ------>MYB83                   -------->P                  --------->MYB55(1)                 --------->TOE1(2)                 --------->TOE2(2)               <---------AHL20(2)                              <---                 <---------MYB111(1)             --------->AHL20(2)                       <---------AHL20(2)                 <---------MYB59          <---------At4g35610                      ------->TEIL  <---            --------->AHL20(2)            --------->At4g35610               --------->AHL20(1)<------       ------------>CBF------>MYB46(1)<------ZmHOX2a(2)   --------------->AtSPL8  <---------CCA1(2)    <-----------GT1------>MYB46(1)  <------ZmHOX2a(1) --------->AHL20(1)   --------->YAB1--------->AHL20(2)   atcaaattacacaataaaacctaccaactaaatgaataggatcaagctgaataaaatatactagtactattttttaaaaataatgtatctataaaattta  26975100                                               <---------AHL20(2)                                               <---------YAB1                                            <---------------AGL15                                            --------------->AGL15                                     --------->ARR11(3)                                     <---------ARR11(3)                    --------->AHL20(2)                                     <---------GLK1(2)       ---------->DOF2<---------AHL20(2)------- ------YAB1                       <---------TOE2(3)--------->YAB1      --------->AHL20(2)    <------- ------TOE2(3)                   ---------->DOF2--------->YAB1         <---------AHL20(2)   <-------- ---AHL20(2)                   <---------YAB1 --------->AHL20(2) ----------->GT1  <---------YAB1   tcgttgttaaatctcacagatagtttaggggctattaaagatttttcatataatagtaagaccgaaagcgtaatttataaaattttgatggctagattga  26975200                                                                                --------->GLK1(1)                                                                                <---------GLK1(1)                           *TSS                             --------->DAG2     <---------GLK1(2)                        <---------ARR11(3)                 ---------->DOF2   --------->LBD16<-------- ---->GT1               --------->ARR11(3)    ---------->DOF2               --------->HSFB2a(2) --WOX13(1)     <----------DOF2              --------->AtMYB61              <---------HSFB2a(2) <---- ----CBF     <-----------GT1       <---------------------WRI1            <-----------GT1 <---------WOX13(1)   aatatgtgttttttttttctttctaaaatctacagaagtagaagaaaccaaagcgaaatcaaaaagctcagcaattttccagatttctctaattgacgat  26975300                                                   <-----------RAV1(1)                                                 <---------ANAC58                                                 <---------ANAC58                                        <------NtERF2                                        --------->ATERF1(1)                                       <---------ATERF1(1)                                       ------>NtERF2                                      --------->DEAR3(1)                          <-------GAMYB                                      ----------->HVH21                          <---------MYB46(3)                                     --------->ATERF1(1)                         --------->MYB55(2)                                     <------NtERF2 --------->ALFIN1             --------->ALFIN1                                     --------->RAP2.3(1)                     <---------DEAR3(1)                               ---------->DOF2 ------>NtERF2                 --------->ALFIN1                             --------->LBD16   --------->LBD16 <----------DOF2  <---------AtMYB61                         <---------ARR14(2)   <---------DEAR3(1)           <---------bZIP60(2)                         ------------------>SPL14<---------ANAC46          <---------ANAC46  <----------DOF2        --------->ARR14(2)  <---------LBD16  <---------DAG2<---------LBD16 -TOE2(3)            <------ZmHOX2a(1)<---------DEAR3(1)<---------ANAC58----------->TGA1            < -----DEAR3(1)   ---------->DOF2    <---------RAP2.3(1) <---------ANAC58----------->HVH21           <   ggcgctttgtgctactactcaaaggactatccgtatagcggcgacgctccggcgtgttgctcgacctttcgctactgacgcggtggttgagtcggattac  26975400                          --------->ARR14(2)                          <---------ARR14(2)                          <---------GLK1(2)                       <---------HSFB2a(2)                       --------->HSFB2a(2)                       --------->ANAC46                      <---------LBD16                   <---------GLK1(1)                --------->ANAC58              <---------MYB52(1)                    --------->ANAC58           ------>ZmHOX2a(2)                    --------->ANAC58           ================================HOX2a_HOX2a          =================================HOX2a_HOX2a--------->At5g28300          <------ZmHOX2a(2)--------->GLK1(1)    --------->ANAC58       ----------->ARR10--------->LBD16    <----------DOF2  --------->ALFIN1<---------ARR11(3)    --------->GLK1(2) ---------ANAC58  --------->ARR11(3)<------ZmHOX2a(1)----------->GT1     <---------ANAC58 ---------ANAC58--------->MYB59 --------->LBD16 --------->ANAC46         <---------ANAC58         <--   aagcgtggtgagatcggtaaggtctccggaatcccagaggagcatctttctcgcaaggtaaataagcattcgatttcttacgaattcagtttagaaaatt  26975500                             --------->At4g35610               --------->GLK1(2)               <---------ARR14(2)   <---------ANAC46          <---------At4g35610   <---------ANAC58   <---------YAB1                        --------->WOX13(1)                      -   <---------ANAC58   --------->ICU4                       <---------WRKY38(1)                  <----  <-------TEIL<---------GLK1(2) <-------TEIL --------->ATHB12         <---------ZAT6            ----- -------TOE2(3)--------->ARR14(2)--------->REM1(1)        --------->WRKY18(1)      <---------AHL20(2)   agggttcgtgatcagagaatcgtcttaattgagctacatcgtgttcttgatttgattttggtcaatcgaatagtgctaagagtattgaatttggaaatta  26975600                                             --------->HSFB2a(2)                                             <---------HSFB2a(2)                                            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                          <---------ARR14(3)                                          <---------ARR11(3)                                          --------->ARR11(3)                                <-----------------AGL1                            <---------At4g35610                            --------->ZAT2<---------AGP1                            --------->At4g35610                     <---------HSFB2a(2)  --------->GLK1(2)                     --------->HSFB2a(2)  --------->ARR14(2)                                       <-      --------->AHL20(2)<<<<<<<ZML2       <---------ARR14(2)                        --------->TOE1(3) ---------->GT1 <---------ZAT2 -------->P --------->ARR14(3)                        --------->TOE2(3) -------GT1     --------->At4g35610      <------ZmHOX2a(1)                       <---------ALFIN1  <- ---->MYB52(1)  <---------At4g35610 <-----------HVH21<---------LBD16  <-----------GT1  ---------->DOF2   acaggtgataatatactcacctgctagaacagctacccagtcaggatctggaaaactcggaaaatggaagattaacttcgtctccaccttaaagtatgct  26975700  Previous    Next  AGI:  At5g67580.1    Description:  ATTRB2/TRB2 (TELOMERE REPEAT BINDING FACTOR 2); DNA binding / transcription factor. similar to ATTRB3/TRB3 (TELOMERE REPEAT BINDING FACTOR 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G49850.1); similar to MYBR6 [Malus x domestica] (GB:AAZ20445.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Telomere repeat binding factor (InterPro:IPR013127); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro Range:  from: 26972361    to: 26974969    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g67590.1    Description:  FRO1 (FROSTBITE1). similar to NADH-ubiquinone oxidoreductase related-like protein [Brassica rapa] (GB:ABK78688.1); contains InterPro domain ETC complex I subunit conserved region; (InterPro:IPR006885) Range:  from: 26975227    to: 26976783    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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