Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->At4g35610                                               <---------At4g35610                                         --------->CCA1(2)                                         <------ZmHOX2a(2)                               --------->AHL20(1)                               <---------AHL20(1)                         <------ZmHOX2a(2)  --------->LBD16                        <---------ARR11(3)------>ZmHOX2a(2)                 -------->P   --------->AHL20(2)                                      --------->ANAC46                 --------->MYB52(1)     --------->AGP1                     --------->ZAT6              <---------At4g35610       --------->ARR14(2)            --------->TOE2(3)       -------              --------->At4g35610      --------->At4g35610            --------->TOE1(3)   --------->At4g35610   ----------->GT1     --------->GLK1(1)<---------ARR14(2)  <---------ATHB12--------->TOE1(3) <------   tagattagtaaaattaagctaccagagatcaaatatatatcagatccgaagctaacatccaaatgaataaaaccttaaccctaagaatacgaagcagaac  26963200                                                                       <---------ARR11(3)                                                                       --------->KAN4(2)                                                                       --------->ARR11(3)                                                                       <---------ARR14(2)                                                                      --------->KAN4(1)                                                                      --------->GLK1(1)                                                                      <---------GLK1(1)                                                          --------->ZAT2   --------->ANAC46                                                          <---------ZAT2   <---------ETT(1)                                                          --------->At4g35610 <---------bZIP60(1)                                                          <------NtERF2--------->ARR14(2)                                                          <---------At4g35610 --------->bZIP60(1)                                                         ----------->RAV1(1)------>NtERF2                                                 --------->TOE1(1)    <---------KAN4(1)                        --------->ARR14(2)      <---------LBD16       <---------HSFB2a(1)                        <---------ARR14(2)  --------->ARR14(2)        <----------TaMYB80                        --------->GLK1(2)   <---------ARR14(2)        --------->HSFB2a(1)                       <---------GLK1(2)   <---------GLK1(1) --------->At4g35610                    --------->LBD16    --------->AtLEC2 <-----------RAV1(2)--------->LBD16 -->ARR14(2)   --------->GLK1(1) <---------DAG2--------->TOE1(2)     ---------->TaMYB80    <---------AHL20(2) ---ARR14(2)   <---------GLK1(1) <----------DOF2------>ZmHOX2a(1)    <---------KAN4(2)  ------->TEIL   caaaacttagctctatgaaatccgagaatcggaaactttacctgcaaatcctcggaggccagcagaagacgaatatcccgacatcacatgtatataatct  26963300                                                                                            ---------                                                                                            <--------                                                     --------->ARR14(2)                 <------MYB83                                                     <---------ARR14(2)                 <------MYB46(1)                                                    ------>MYB83                    --------->HSFC1(2)                                       --------->LBD16   --------->LBD16            <---------ZAT2                                      --------->ANAC46  --------->ANAC46            <---------HSFC1(2)              <---------GLK1(2)      <---------LBD16------>MYB46(1)         --------->At4g35610            --------->AHL20(2)  <----------DOF2   --------->AtMYB61         <---------At4g35610    --------->AHL20(2)          <---------DAG2--------->MYB46(3)<----------DOF2     --------->ZAT2   cagaaattatacaaaaaattctcaactctcttcgctttctccggagcaaacaccaaatccgaaacactttgttctgtctgatgcgaagcttggtctggaa  26963400                                                                                         ---------->DOF2                                                                                         ============                                                                                        --------->YAB1                                                                                     --------->WOX13(1)                                      <---------LBD16      ---------->DOF2          ------>ZmHOX2a(2)     <---------HSFB2a(2)  <----------DOF2      <-------TEIL<---------ZAT14        <---------AGP1    ----------->GT1    --------->GLK1(2)      --------->GLK1(2)                   ------->TEIL >HSFB2a(2)           <---------GLK1(2)    ----------->ARR10                      --------->ARR11(3) -HSFB2a(2)     --------->AGP1<----------DOF2<---------ARR14(2)                   <---------ARR11(3)<   actgaatcgagaaattcagagctagattctttcttttttttgggggagattcagaagtgagtaaagagaagtctagttgaaatggatctatcaaagttct  26963500             --------->ALFIN1           <---------ANAC46           <---------ANAC58                                                 <----------DOF2           <---------O2                                                    <------------------------ANAC81           --------->TGA1a                                                ---------->ID1           <---------TGA1a                                                <------------------------ANAC81           --------->O2                                                  <-----------GT1   *TSS           <---------ANAC58                                          <------------------------ANAC81           <---------ANAC55(1)                                  <------------------------ANAC81 <---- <---------TOE2(3)                         --------->GLK1(2) ------>ZmHOX2a(1)            <----------DOF2 ====================bZIP_DOF     <---------ATHB12           <---------At4g35610    <-----------GT1 -----------GT1                  <---------TOE2(3)     <<<<<<<<<TBF1<---------AHL20(2)  <---------At4g35610   attgacgattcagacgtgtgaacgaagacgagactaatgaagacgattctagtcttcttcttcctctgatttttttttcttttttttttctgctttctct  26963600                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                            <---------YAB1                                                          <---------ICU4                                                         --------->ICU4                                                         <---------YAB1                                                       <---------ICU4                           --------->AHL20(2)         --------->ICU4                           <---------AHL20(2)         <---------YAB1                                -                      <---------AHL20(2)            --------->YAB1                                 <-                  <---------AHL20(2)               --------->ICU4           <-----------RAV1(1)   <--                  --------->AHL20(2)               <---------YAB1          <---------TOE2(3)      <--                <-----------TBP                  --------->YAB1          --------->ICU4           ---          <-------GAMYB--------->AHL20(2)       --------->ICU4<---------AHL20(2)                  --- -----LBD16<---------MYB52(1)  --------->YAB1  <---------WOX13(1) ----------->GT1             <------   cggagttttccccgttgtatttatattatttaaaaataagtagtgactgaatgatgatgattattaattagtgaaataatgttgtttacgagttttaaac  26963700                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                      <---------ICU4                                                                                      -------->HAHB4                                <----------DOF2                                       --------->YAB1        <---------CCA1(2)       <---------DAG2                                       --------->ICU4  --------->At4g35610          <---------ANAC58                                      <---------ATHB51 ----->ZmHOX2a(2)              <---------ANAC58                                    --------->YAB1 -----ZmHOX2a(2)      <<<<<<<<<<GT-3b                                             <---------AHL20(2) -------ARR11(3)   <---------ARR11(3)                               --------->ZAT6--------->AHL20(2) -------ARR14(2)   --------->AHL20(1)                --------->GLK1(2)      <-----------GT1 ------>ARR14(2)   --------->ARR11(3)               <---------GLK1(2)     <---------WOX13(1) <-------GAMYB ------>ARR11(3)   <---------AHL20(1) ------>ZmHOX2a(1)           <-----------GT1--------->AHL20(2) -----GT1  --------->YAB1 <----------DOF2<---------GLK1(2)   --------->ATHB12<---------TOE2(3)  -----   gatctgatgcatatcatcaaatatttttcttttgcttttcctatattctcaacagattccaattgatttaacagtgattaacatttaataatgggtgtta  26963800                              <-------MYC3           <---------WOX13(1)                              ------->MYC3           <--------P                         --------->AtLEC2          <---------MYB46(3)                      ------->TEIL                <---------AtMYB61       <----------DOF2                      <-------TEIL              <---------ANAC58         <---------DAG2                  --------------->AtSPL8        <---------ANAC46      <-----------GT1            ---------->DOF2 ------->TEIL        <---------ANAC58      <---------ALFIN1 ---->MYB52(2)    --------->MYB59              --------->ATHB12 <----------DOF2             <--------   gtttgttatctactcaaagttatgtacatgcacatgaaatatgacttcttgagtggttgatcaattctttttccacctttcttctctctcattaactgtt  26963900                                                                --------->ATHB12                                         --------->AHL20(2)     --------->ATHB51              --------->YAB1             --------->YAB1        <---------YAB1              --------->AHL20(2)     --------->AHL20(1)      <--------HAHB4           --------->WOX13(1)        --------->AHL20(2)      --------->YAB1                        <-      <-------TEIL                   <---------AHL20(2)      <---------ICU4                      <---  <---------TOE1(3)                  <---------AHL20(1)      -------->ATHB1             <---------At4g35610  <---------TOE2(3)            ----------->GT1               --------->ATHB51        <---------ZAT14  --------->MYB59        --------->TOE2(3) <---------YAB1   --------->ICU4           --------->ZAT14 ----MYB.PH3(1)    --------->TOE2(3)--------->AHL20(2)----------->GT1     <---------ETT(2)       ----   tttttaggttcatcaattaaaacttaacttcaatggaaataaattataaaactatatagtgaattattattgaatgtagacaaatactacagttgagtca  26964000                                                                  <---------AHL20(2)                                                               <---------ARR11(3)                                                               --------->ARR11(3)                                    --------->TOE2(3)          --------->AHL20(1)    <---------YAB1           <-----------GT1                   <---------AHL20(1)            -------- --------ICU4                <---------AHL20(2)      <----------DOF2     <---------YAB1      <------- ------ANAC55(2)          <---------ICU4  <-----------GT1   --------->YAB1                  --------- ----->ANAC55(2)         --------->ICU4  <---------ATHB12  <---------ATHB12    ----------->GT1   cttattacaaatgtttgatacaatgtcatatttacatttcttaatcactctccatctttcaatgatatattttttataaatgtgtaaataactattaaaa  26964100  Previous    Next  AGI:  At5g67540.1    Description:  glycosyl hydrolase family protein 43. similar to glycosyl hydrolase family protein 43 [Arabidopsis thaliana] (TAIR:AT3G49880.1); similar to hypothetical protein OsI_004549 [Oryza sativa (indica cultivar-group)] (GB:EAY76702.1); similar to Os01g0879400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044987.1); contains InterPro domain Glycoside hydrolase, family 43; (InterPro:IPR006710) Range:  from: 26961254    to: 26963591    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g67550.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G71110.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65326.1) Range:  from: 26963980    to: 26966387    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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