Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <---------At4g35610                                                                                      --------->At4g35610                                                                                      <---------ZAT2                                                                                     <-----------RAV1(1)                                                                                   <---------ZAT2                                                                                   --------->At4g35610                                                                                  <-----------RAV1(1)                                                                                <---------At4g35610                                                                             <---------At4g35610                                                                             <---------ZAT2<---------         <---------HSFB2a(1)                                                <-----------RAV1(1)<-----         --------->HSFB2a(1)                                    <---------ZAT18 --------->At4g35610 <  ---------->DOF2                                               --------->ZAT18 <---------ZAT2 <----- ------ANAC46                                                  --------->ALFIN1<-----------RAV1(1)--- ----MYB46(3)                                                --------->ALFIN1--------->At4g35610  <-- --->MYB55(2)        <------ZmHOX2a(2)                    --------->DAG2    <XXXXXXXXXXXXXXXXXXXXMIR834 -->ALFIN1         <------ZmHOX2a(1)               ----------->GT1  <----------DOF2<---------At4g35610 ---AtMYB61   <----------DOF2            ---------->DOF2 ---------->DOF2   <---------RAP2.6(2) <-----   tgggaaaagaaaccttctttaggatcaattcgatgaaatgaaacaaagacaagaggcaaaaaagtgtgggctatattgctgctgctgctgctgctttgtg  26933100   --------->ETT(2) -DOF2                                                                                              - ----ANAC58                                                                                     ----- ---------ANAC46                                             --------->MYB52(1)             --------- ----ANAC46                                      ----------->RAV1(1)                        --------- ------>ZAT14                                   <---------ETT(1)        ----------->RAV1(1)---------- -------ZAT14         --------->ZAT14           <----------ID1     --------->WOX13(1)     <---------TOE1(3) ----ANAC58    <------ZmHOX2a(1)         --------->YAB1   --------->ANAC46                <---------TOE2(3)   tgtagtagacagagagaggaacagagaactctatctaatccaagagtaatccgacaaaacacaaaacagcaatccaacaaaaaaaactctataacgttaa  26933200                                                                               --------->GLK1(2)   --                                                                               --------->ARR14(2) <--    ---------->DOF2                                                            <---------ARR14(2) --- ------------------------>ANAC81                                              <---------CCA1(2)   --- --------->DOF2     ----------->GT1       --------->At4g35610                 <---------GLK1(1)   <-- ----->DOF2      --------->MYB52(1)       <---------At4g35610         <---------MYB52(1)          <-- >TOE1(3)    ------------------------>ANAC81             ---------->ID1    <---------ZAT18        --- >TOE2(3) ----------->GT1      ---------->DOF2<---------MYB52(1)     <----------DOF2             <--- ->GT1  ---------->DOF2      --------->YAB1 <---------MYB46(3) ------>ZmHOX2a(1)                <----   aagaaagaaagaaagaaaaaaacagagaaaatcaaaagaagatgagctgttgtttcttcgtcgtccttctcctttagtgcaaatctgaaaacccttcaga  26933300                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                    --------->ANAC46                                                                  --------->AtMYB61                                                                  <---------ALFIN1                                                                 --------->MYB46(3)                                                               --------->ANAC46                                                             <---------ATERF1(1)                                                             ------>NtERF2                                                            --------->DEAR3(1)                                                          ------>NtERF2                                                          <---------ATERF1(1)            <---------CCA1(2)                             --------->ABI4(1)          <---------DAG2                                 --------->DEAR3(1)          <----------DOF2                                --------->DREB2C(2)     ---------->ID1                                      ------->GAMYB  --------------->AtSPL8                                 <---------ALFIN1 ------->KAN4(2)                                        --------->DEAR4(2) -------KAN4(1)                                        --------->ABI4(1) ------>KAN4(1)                                       --------->AtMYB61 ------>HSFC1(2)                    <---------ALFIN1  --------->DEAR3(1)                      <------ -------HSFB2a(1)                  <---------ZAT18    <---------ALFIN1                  <---------YAB1 -------HSFC1(2)                 --------->ANAC58    --------->MYB46(3)                <----------DOF2 ------>HSFB2a(1)                --------->ANAC46    <---------ABI4(2)                <---------ICU4 ------KAN4(2)                   --------->ANAC58 --------->At4g35610                 --------->YAB1 -----GLK1(2)            ------>ZmHOX2a(1)      --------->YAB1 <---------ALFIN1     --------->GLK1(2)   atgttctgtcccctttatctctctctccttacaataccccactctctgaatcagcaccaccgcctccaccactcaacttataaaacaatctttattaaac  26933400                                                                                     --------->MYB52(2)                                                                                     <---------MYB46(3)                                                                                     <-----------RAV1(1)                                                      ---------->ID1           <---------ANAC46  <---                                                 <---------ARR14(2)          <---------bZIP60(2) <---                                              <---------TOE1(2)              <---------ANAC46    <---                                              --------->LBD16             ----------->HVH21<---------                                              <---------TOE2(2)       <---------ANAC46     <---------DAG2                      --------->DAG2         <---------LBD16          --------->ANAC55(2) <---------ANAC46                     ---------->DOF2        --------->TOE1(2)         <---------ANAC55(2) <---------ANAC58                ---------->DOF2        <---------MYB52(2)             <---------ANAC55(1) <---------ANAC58           <---------TOE2(3)      ----------->GT1--------->ARR14(2)   <---------ANAC58 ---------->ID1 -----GT1 ---------->DOF2        --------->MYB59<------ZmHOX2a(1)     <---------ANAC58<-------GAMYB   tatataagagattaaagaaaaagaaaagttgtattttggtaaataacccaggatttgtctcaatcgaagaatacgtgtgatgtgtgtttgttgctttttt  26933500         <---------MYB46(3)         ----------->GT1        <---------ATHB12                                                          ----------->GT1   --------->ANAC58                               --------->ARR14(2)         ----------->HVH21   --------->ANAC58                            <---------ANAC46           --------->ARR11(3) ------ANAC58       *TSS                       <---------ANAC58    --------->ANAC46 ------ANAC58 <---------TOE2(3)                <---------ANAC58    --------->ANAC58 ------ANAC46---------->DOF2           <------------CBF            --------->ANAC58 -DOF2  --------->ICU4             ---------->DOF2<---------ARR14(2)      <---------ARR11(3) <-------   cttggaagcaatggttaaagtagtagtagcaagtagcaaaagattgtatgcgtatacataaattcagtcacgctaatatctgacaagttaaactgtggtt  26933600                                               <---------AHL20(2)                 --------->YAB1      ----------->HVH21                       --------->YAB1 --------->AHL20(2) --------->AHL20(1)  <---------DAG2                           --------->YAB1    <---------AHL20(1) --------->AHL20(2)  <----------DOF2                 <----------DOF2            --------->AHL20(1)--------->YAB1       < --MYB46(3)                  <----------DOF2 --------->AHL20(2)       --------->ZAT6--------------->AtSPL8   tccactttctgacctctctctctctctctctcttttcttttgcaaaaataaaaatgaatacaatataatatagcactagaaaaataatagtactagtttt  26933700                                                                                      <---------GLK1(1)                                         <---------ANAC58                         --------->ANAC58                                         <---------ANAC46         <---------MYB52(1) <---------ARR14(2)                                         <---------ANAC58   <----------DOF2 --------->AtLEC2                                --------->AtLEC2    --------->ANAC58 --------->HSFB2a(1)                           --------->TOE2(3)        ===================bZIP_DOF   --------->ANAC58                          <---------At4g35610       --------->ANAC58 <---------HSFB2a(1)           <- ---------ANAC46          --------->At4g35610       --------->TGA1a <---------KAN4(2)--------->ARR14(2)   ttgagtgaatgagtcaaaattttgagtcatcttaatgcaaattgtgtgagagtcaagtcagtcttttcggtatgttccatccacaaggatttgtgccatt  26933800                                                                                   <---------YAB1                                                                                <---------ARR14(2)                                                                            --------->LBD16                                                              <------MYB83 --------->ANAC46            --------->AtLEC2                          --------->CCA1(2)    --------->ANAC58       <---------WRKY18(1)                        <---------ANAC46         --------->ANAC55(1)      ----------->HVH21            <---------ANAC46   --------->GLK1(1)    <---------ANAC55(2)      --------->WRKY38(1)          <---------ANAC58   <---------GLK1(1)    --------->ANAC55(2)   <<<<<<<<<<MYB80                 <---------ANAC58  --------->ARR14(2)    --------->ANAC58  <------MYB46(1)                  <---------AtLEC2  <---------ARR14(2)   <---------LBD16  <------MYB83              <---------ANAC58      <---------TOE2(3) --------->AHL20(2)         <----- <---------AtMYB61          <---------ANAC58     <---------LBD16    <---------AHL20(2)      <-------- --------MYB52(1)    <----------DOF2          <----------DOF2 <------MYB46(1)   --------->ARR14(2)  <   cgtttggtttgaccatggaaactcttttttgcttcttgcttggaagcgttttacggatatgagttggtatttatatcacggaaatatgctagtttatctt  26933900                                                                              ------>MYB46(1)                                                                              -------->P---------->DOF2                                                                              ------>MYB83                                                                             --------->MYB55(1)                                                                            <---------MYB46(2)                                                                            <---------MYB111(2)                                                                            <---------MYB59 ---------->ID1      <---------YAB1                 <-----------GT1         <---------MYB111(1) -----DOF2--------->YAB1              <---------ANAC58                      --------->MYB46(3) ---GT1<----------DOF2         --------->ICU4     <---------AHL20(2)  <---------------AtSPL8 -----------GT1    ----------->GT1    <---------ANAC58           --------->YAB1     ---------->DOF2   tttttccttctttgataagtcttgttattagcaatgttttccttgctacaaatttatcgccatggaataatacaggtacctaccaaaaaagaaagaaact  26934000  Previous    Next  AGI:  At5g67440.1    Description:  phototropic-responsive NPH3 family protein. similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT4G37590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71996.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210) Range:  from: 26929933    to: 26933520    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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