Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->ATHB12                                                                   <--------HAHB4                                                                   <---------ICU4                                                                   --------->YAB1                                                                  --------->ICU4                                                                  <---------ATHB12                                                                  <---------YAB1       ----------->GT1                             <---------ARR14(2)             <---------ARR11(3)       ---------->DOF2 --------ATHB12              --------->ARR14(2)             <-----------ARR10       <------ZmHOX2a(1) ---GT1           <----------DOF2                           --------->ARR11(3) --------->GLK1(2)-----   catgaatacaacattccttcctttagagacgaatactcattcacctataaacccaaaccaaaaatctcatcattactctagaatcaggaaagaaaaacaa  26896400                                                              <---------WRKY18(1)                                                             --------->WRKY45                 <----------DOF2                             ----------->HVH21           <---------ANAC58                                  --------->WRKY38(1)           <---------ANAC58                                  --------->WRKY12           <---------ANAC46                                <----------DOF2           <---------ANAC55(1)                           <---------ZAT2           --------->ANAC55(2)                           --------->ZAT2          <---------LBD16                            ------>ZmHOX2a(2)         --------->MYB52(1)                         <------ZmHOX2a(2)       <---------ANAC58                            --------->ARR14(2)                             ---       <---------ANAC58                 <---------LBD16 <---------TOE1(2)                      <-----     <---------AHL20(2) ----------->HVH21          <---------ARR14(2)                 --------->AtMYB61 ----->DOF2<---------ANAC55(2)--------->ARR14(2)  <------ZmHOX2a(1)--------->LBD16 <---------ALFIN1<-   aagagatttacttacgggtctttggtctgaaggaacttcaatctcggaactaggatcccagctttgacccgagaaactcatgcttccacctccattgtta  26896500                                                       --------->MYB46(3)         <---------YAB1                                                      ------>MYB46(1)          <---------AHL20(2)        <---------ALFIN1                  ------>ZmHOX2a(1)            --------->LBD16 ------>TOE2(3)                    --------->DAG2     ------>MYB83     ------>NtERF2 ------GT1          --------->ANAC46    ----------->RAV1(2)        --------->ARR14(2)            ---- ---------DOF2<----------DOF2     ---------->DOF2    --------->ANAC46 --------->ANAC46------>ZmHOX2a(2)   cctttgtcttccactgctttcaccgaaacacttagaaaaagctcctgcttcttaccaacaacatcgctgattccgccatattttatgatcgacgaagaat  26896600                                               <---------ARR11(3)                                               --------->ARR11(3)                                               <---------ARR14(2)               --------->TOE1(3)                                              <---------CCA1(2)              <-----------GT1                                              --------->GLK1(1)        <---------TOE2(3)        =====                                              <---------RVE1(1)       <-----------GT1           -----            --------->ZAT2                    <---------GLK1(1)       <---------DOF5.7(2)       =====            <---------At4g35610          --------->ALFIN1             --------->MYB52(1)      -------            <---------ZAT2              <---------MYB52(1)          <---------MYB52(2)        <------         --------->LBD16<---------ZAT6 --------->LBD16          --------->At5g28300           <------ ----->YAB1 --------->At4g35610      <---------LBD16           ----------->GT1 ----------->RAV1(2)   catagtaactcccgagcttactactactgttactacaaacccggtgggatatcttgggaatcagagggtaattaacgattaacctgagcattgctcgatc  26896700                                                                       --------->YAB1                                                                --------->ANAC55(1)                       --------->ATHB12                         --------->ANAC58                       <---------MYB46(3)                       --------->ANAC46          --------->LBD16<---------WOX13(1)            --------->At4g35610          ------>ZmHOX2a(1)                    <---------At4g35610   --------->ANAC58          <-----    ------>ZmHOX2a(1)<---------MYB52(1)        --------->At4g35610   --------->ANAC58          ------ ================HOX2a_HOX2a            --------->MYB111(2)     --------->ANAC58              ------- ->ZmHOX2a(2)       <-------GAMYB       --------->MYB111(1)    <---------LBD16              --------- ==========HOX2a_HOX2a--------->WRKY38(1)  --------->ALFIN1 --------->CCA1(2)               <-------- -->ARR14(2)       <---------ANAC46    <--------P      ----------->RAV1(2)                 --------->ICU4 ---AGP1 --------->TOE1(2)          <---------TOE2(3)  <---------At4g35610                 <---------YAB1 ---ARR14(2)   <---------ZAT14    ---------->DOF2   <---------ZAT18 *TSS                 --------->YAB1   tgattcctgttcctgagagtaccgttgattgaagattaaaggtaagtggagcagagcacctgatacacggcaagcaaaacagagccagaaataataataa  26896800                                                       ------->MYC3                                                       ------->MYC2                                                       <-------MYC3                                                       <-------MYC2                                                       ------->PIF5                                                       <-------PIF4                                                       ------->PIF4                                                       ----------------------->TaNAC69(2)                                                ------->MYC2                                                ------->MYC4                                                <-------MYC3                                                <-------MYC2                                                ------->MYC3                                               <<<<<<<<<<HY5                                               >>>>>>>>>>HY5                                               <---------O2                                               <---------PIF3(3)                                               <---------bZIP60(2)                                               --------->bZIP60(2)                                               --------->TGA1a                                 <------NtERF2------>NtERF2                                <-----------HVH21--------->ALFIN1                                <-----------TGA1<-------MYC4                               <---------ANAC58<---------TGA1a                               <---------ANAC46--------->O2                               <---------bZIP60(1)     <-------MYC4                               <---------TGA2(1)<-------PIF5                               <---------ANAC58--------->PIF3(3)                               --------->bZIP60(1)     <-------PIF5                        --------->TGA1a      <---------ALFIN1  --------->ZAT14       <---------O2        ---------------->PIF3(2)                      --------->ANAC58 ----ICU4               --------->O2       <-----------------PIF3(1)                      --------->ANAC46 --->YAB1               <---------TGA1a   --------->ANAC58                    <---------ANAC46 -->ICU4         --------->At4g35610      --------->ANAC46          --------->ANAC58      --------->ANAC58 >YAB1           <---------At4g35610      --------->ANAC58          --------->ANAC46  <---------HSFB2a(2) -ICU4   <---------AtMYB61     --------->TGA2(1)------->PIF5        --------->ANAC58  --------->HSFB2a(2)   tcagtttagttttggtttcttctgccacttgtggcgtcactctctcgccacgtggcacatgctcccttgcacgcattctctcgtgtttccacaagcctct  26896900                                                             <---------AHL20(2)                                                            --------->AHL20(2)                                                      <----------DOF2                                               --------->ATHB12                                              <---------AHL20(2)                                --------->ANAC58     <---------ANAC58                  --------->ATHB12          --------->ANAC55(2)                                     <                 <---------AHL20(2) <------NtERF2    <---------ANAC58                    --------->YAB1      --------->AHL20(2) <---------ZAT18  <-----------GT1   <---------AHL20(2)          <---------ATHB12   --------->YAB1<---------YAB1 --------->ANAC58 <---------WOX13(1)                   --------->WOX13(1)   ctcagtaataaactaaaatttcattgggccactcaggccccgttttacttaattggcttttattaaatggcccatttcagtcatatatcaatcacaaaac  26897000                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   <-                                                            ----------->GT1                        <-                                                         <---------ICU4                            <-                                                     <---------------AGL15                        ---                                                     --------------->AGL15                       <---                                                    ----------------->AGL3                --------->CCA1(2)                                                    ----------------->AG                 <---------ARR14(2)                                                    ----------------->AGL2           ------>MYB46(1)<                                                    <-----------------AGL2           ------>MYB83<---                --------->YAB1                      <-----------------AGL3  ----------->GT1      <---        ---------->DOF2            <----------DOF2  <-----------------AG --------->DAG2  <---------GLK1(2) ------ZmHOX2a(1)  --------->MYB52(1)            --------->GLK1(1)     ---------->DOF2   --------->ARR14(2)   gaggagcccataatgcaaaaataacgaggcagacgcgcttaattttctcaaatatccaaaaatggctaatttcaaaaggggttaacctacagatttgagg  26897100  ----------->GT1 --------->ALFIN1 -------MYC3 ------>MYC3 ------>MYC2                                                         <---------TOE2(3) ------>PIF5                                                    --------->ZAT6 -------MYC2                                                --------->AHL20(2) --------ANAC46                                          --------->AHL20(2) --------ANAC58                                          <---------ICU4 -----NtERF2                                             <---------AHL20(2) --------ANAC58                                          --------->ATHB51 --->NtERF2                                             --------->ICU4 ------ANAC58                                        <---------AHL20(2)               --------->ATHB12 -------PIF5                <---------MYB46(3)       --------->AHL20(2)      ----------->GT1 ------ANAC58               ----------->GT1  <---------ATHB12<---------AHL20(2)      <---------YAB1 ------ANAC46  <----------DOF2  --------->MYB52(2)----------->GT1--------->YAB1      <---------AHL20(2)   cgcgtggtgataactcgcttatagtgcaagtggttatttgttttccaatgaatagttaattatttaatactaatgtatgaagaaaatttcattgggccac  26897200                             <---------AHL20(2)                            --------->AHL20(2)                      <----------DOF2                     <---------ANAC58               --------->ATHB12              <---------AHL20(2)                                    <------ZmHOX2a(1)            --------->ANAC55(2)                                   --------->ALFIN1          <-----------GT1   <---------AHL20(2)           --------->YAB1             --------->YAB1    <------NtERF2    <---------ANAC58                   ===================HOX2a_HOX2a --------->YAB1  --------->PCF5 <---------WOX13(1)                     <------ZmHOX2a(2)   ---------->DOF2   tatggccccgttttacttaattggcttttattaaatggcccatttcagtcatatatcgatcacaagacgaggagcccataatgcaaaaataatcaggcag  26897300  Previous    Next  AGI:  At5g67370.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11840.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75014.1); contains InterPro domain Protein of unknown function DUF1230 (InterPro:IPR009631) Range:  from: 26894779    to: 26896768    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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