Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <------ZmHOX2a(2)                       --------->CCA1(2)                       =================================HOX2a_HOX2a                      --------->ARR11(3)                      <---------ARR11(3)                      --------->ARR14(2)                      <-----------ARR10                      <---------AGP1                      --------->AGP1               <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              --------->LBD16          <----------DOF2          <-----------HVH21        <------NtERF2 <---------ARR14(2)                                                     --------       <---------RAP2.6(3)                                                       --------->MYB52(1)       <---------ATERF1(1)                                                      ----------->HVH21       ------>NtERF2----------->ARR10   --------->HSFB2a(2)                   --------->ANAC58   ----      <---------ATERF1(2)     --------->ALFIN1                                --------->ANAC58 ------      --------->DEAR3(1)------>ZmHOX2a(2)                              --------->ALFIN1     ---------      --------->RAP2.6(2)   <---------ANAC46                         <---------ANAC46     <---------LBD16      --------->ATERF1(2)  <---------DEAR3(1)                        <---------ANAC58  --------->ZAT2      <---------RAP2.6(2) <---------LBD16                         <---------AtMYB61    <---------ZAT2     --------->ATERF1(1)================================HOX2a_HOX2a  <---------ANAC58  --------->ABI4(2) -------DOF2  --------->ANAC46<---------ANAC46           <------ZmHOX2a(1)  <---------ANAC46--------- ---DEAR3(1)<-----------RAV1(2) --------->ALFIN1 <------ZmHOX2a(1)--------->ALFIN1    --------->ALFIN1   tgtaagagccggcttcagggaacagatctgcggtgtgttcgtcgagaccgaggaagagaggagtacgagtggtgtgtagctcgtaacggtgctccggtaa  26891400                                                                                                    -                                                              <---------ARR14(2)       --------->REM1(2) <xxxxxxxxxxxxxxxxxsmallRNA(si3)  <------NtERF2               --------->GLK1(2)<---------HSFB2a(2)  < ->At5g28300                      <---------At4g35610         --------->ARR14(2)       <---------ZAT14 ----->MYB52(1)                  <---------DEAR3(2)    --------->REM1(2)       --------->HSFB2a(2)  - ---->DOF2                      <---------DEAR3(1)    --------->ALFIN1    <---------ANAC58        <-- >LBD16    <-----------RAV1(2)  <---------RAP2.6(2) <---------ANAC58      <---------ANAC58       ---- -->GT1 --------->ZAT6         --------->RAP2.6(3)  <---------ANAC58  ------->TEIL     --------->ZAT14   aacggagataacaccaggttgagtcatgagcgagtcggcttcttcttgagttagccgtgttgagaatccatgaatcgcgttctcgtaagtgtagagcaat  26891500                  ------>ZmHOX2a(2)                 --------->CCA1(2)                --------->AGP1                <---------AGP1--------------->AtSPL3                <---------ARR11(3)                --------->ARR14(2)                --------->ARR11(3)                                 --------->At4g35610              ----------->ARR10 <---------SPL7                     <---------At4g35610         <------NtERF2        --------------->AtSPL8            <------NtERF2 -------->At4g35610          ------->TEIL                      ------>NtERF2 ---------At4g35610     --------->At4g35610                   --------->ANAC46                      < ---------->RAV1(2)     --------->CCA1(2)       <---------AtMYB61  ----------->RAV1(2)              < -------RAP2.6(2)<------ZmHOX2a(2)           --------->ALFIN1--------->RAP2.6(3)    ----------->HVH21 ----->RAP2.6(3)<---------ARR14(2)  --------------->AGL15   <---------ATERF1(1)   --------->O2      <   tcggctgagtcggagatagatctgagagatgaatcgtaccagttagagtggaggtcgaaagacgacggcatctgagatttagccatgtgaacgatgtaag  26891600                                 <---------ARR14(2)                                 --------->ARR14(2)                          --------->ALFIN1                         ------->MYC3                         ------->PIF5                         <-------MYC3                         -------->ABF1                         ------->MYC2                         <-------MYC4                         ------->MYC4                         <-------PIF5                         <-------MYC2                        <---------bZIP60(2)                        >>>>>>>>>>HY5                        <---------TGA1a                        =============================bZIP_DOF                        =============================bZIP_DOF                        <---------ANAC55(2)                        <---------O2              <------ZmHOX2a(1)  --------->GLK1(2)           <------ZmHOX2a(1)    <---------GLK1(2)                                                  <-        <------NtERF2   >>>>>>>>>>ABI5                                                             <-      --------->ETT(1)  --------->ANAC55(2)                                                        <-      <---------DEAR3(1)--------->O2                <------ZmHOX2a(1)                           <----    <-----------HVH21   --------->TGA1a          <------ZmHOX2a(1)  <------ZmHOX2a(1)     <---------WOX13(1) ---------ANAC46        >>>>>>>>>>AtMYC2  ---------->DOF2         <---------ANAC46      --------->ATHB12 ---------ANAC58       ------------>OsbHLH66   --------->ALFIN1--------->ALFIN1        --------->ICU4 ---------ANAC58    <------ZmHOX2a(1)------>ZmHOX2a(1)  ---------->DOF2                <---------YAB1   ttccttggtcggaggaggaagaggacacgtggcagaatcctagacaaaggaggaggaagaaagcagtggaggagagaaacgaagaagacatgattgagat  26891700                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                        --------->SPL7                                                                                      <---------SPL7                                                                                     <---------ANAC58    <---------ANAC46                                                                 <---------ANAC58  <-------GAMYB                                                                      <---------ANAC46  <---------ZAT14     --------->TOE1(2)                                           <---------ARR14(2) --------->ALFIN1    ------>ZmHOX2a(2)                                            --------->ARR14(2)< --------ANAC46     <------ZmHOX2a(2)        <---------AHL20(2)                <---------------------WRI1 --------ANAC58    <---------ARR14(2)        --------->AHL20(2)                <---------TOE2(3) <--- --------ANAC58    --------->ARR14(2)     ----------->GT1             >>>>>>>>>TBF1 <-------TEIL ---- -----AtMYB61  <---------LBD16           ----------->GT1           >>>>>>>>>TBF1 <------ZmHOX2a(1)---   ggtgtgttgtgtctctctctggatccaaggagaagacgagagagtgtttaaatacagtagaagagagaagaagaagaagatgaggatgcgtacgaaggaa  26891800     *TSS--------->GLK1(2)                                                                <---------MYB52(1) ------->TOE2(3)        XXXXXXXXXXXXXXXXXXXX>MIR847                         <---------YAB1--------->DOF5.7(2) -------ICU4        <---------ZAT14                                         <---------AHL20(2) ----->ATHB1        --------->ZAT14                                         --------->AHL20(2) ------>ATHB12      --------->ZAT18          --------->ICU4      ---------->ID1  <---------AHL20(2) ------HAHB4        <---------ZAT18          <---------YAB1      <-----------GT1--------->AHL20(2) ---------YAB1   <---------ANAC46          --------->YAB1       <-----------GT1 <---------AHL20(2) ------ATHB12 <---------MYB52(1)     >>>>>>>>>WRKY18       ---------->ID1<----------DOF2----------->GT1 ----->ICU4  <-------GAMYB          ----------->HVH21 <----------DOF2  --------------->AGL15    <---- ------>YAB1<-----------RAV1(1) <----------DOF2     <------------------------ANAC81     <---------MYB46(3)   tcattagagagactctgttgtgtccactcttcttctttttgacagtgatgactattcttttgtttttttccttctctttttattaattagtcgttaattt  26891900                                           --------->ZAT14                                           <---------ARR14(2)<---------ARR14(2)                                           --------->ARR14(2)--------->ARR14(2)                                           <---------ZAT14  <---------CCA1(2)                                    <---------REM1(2)     <---------ANAC58        <---------At4g35610                                    --------->ZAT14       <---------ANAC58        --------->At4g35610                                    <---------ZAT14       <---------ANAC46       <---------YAB1                             <---------ZAT18          --------->HSFC1(2)      --------->GLK1(2)                             <---------ZAT14          <---------HSFB2a(1)     <---------ARR14(2)                             --------->ZAT14   ----------->GT1                --------->ARR14(2)                             --------->ZAT18  --------->ANAC46               --------->ARR14(2)                           <---------------AtSPL8     --------->HSFB2a(1)    <---------GLK1(2) -----------AtSPL8         --------------->AtSPL8     <---------HSFC1(2)     <---------ARR14(2)   agtacttagacttgtgttctgttcacatgagtgtactctacacagtatacggtagaattttcgtatattgttgtctcgagattctgcttactatatcgtc  26892000                                                <------MYB83                                                <------MYB46(1)                              --------                                              <---------WOX13(1)                        --------->ANAC58                                            --------->ATHB12                       <---------ICU4            <---------YAB1                 <---------YAB1             <---------ZAT14 <---------ICU4     <---------ANAC55(2)                 --------------->AGL15    <---------------AtSPL8--------->ANAC58     --------->ANAC55(2)           <---------ICU4    --------->YAB1   --------->ZAT14<---------YAB1  <---------ARR11(3)    <-----------GT1<---------At5g28300   ---------->DOF2       --------->YAB1   tcgagatacttattttcatcggtgtttttctatctaattgttactgtgattggtataagaatataaagatggtacagtgatagaatcatcatgccatgtg  26892100                                                      --------->AHL20(2)                                                     <---------WOX13(1)                                 --------->SPL7   <---------AHL20(2)                              <---------ANAC58    --------->AHL20(2)                       <------MYB46(1)           <---------WOX13(1)                       <---------MYB46(3)      --------->ATHB12                       <------MYB83         --------->YAB1                   --------->ALFIN1         <---------ICU4                  <---------ANAC46              <---------ICU4  <---------ANAC58<---------YAB1          <---------AHL20(2)  <---------At4g35610 <---------AtMYB61    --------->ICU4        <----------DOF2   <---------STY1(2)  --------->At4g35610<--------P<---------SPL7 --------->ICU4    <---------DAG2     --------->STY1(2) ->O2         --------->YAB1 --------------->AtSPL3--------->ATHB12   <---------YAB1   attcagaagaaaaccatcatggtgttggtttgccgttcgaaaaccattatgattaattgaatatagccttttttaattgtgtattagctagtagaagact  26892200                                                 --------->MYB52(2)                                                 <------MYB83                                                 <------MYB46(1)                                                 <---------MYB46(3)                --------->ICU4                                                <---------TOE2(2)             --------->ANAC58                                               <---------MYB52(1)             --------->ANAC55(2)                                             <---------ANAC58                 --------->ANAC58                                             <---------ANAC58            --------->ANAC55(2)                   ------>ZmHOX2a(1)         <---------ANAC46            --------->ANAC46    --------                ---------->ID1        --------->ANAC55(2)     <----------DOF2 <---------ANAC55(2)   agtagtatttgtttgtttgtcctctctctcgtccaagtttacatattacgttggtttccatacactttgttctatacgttacgaaataatcgaccttgta  26892300  Previous    Next  AGI:  At5g67360.1    Description:  ARA12; subtilase. Identical to Subtilisin-like protease precursor (ARA12) [Arabidopsis Thaliana] (GB:O65351;GB:P80854;GB:Q39007;GB:Q8RWQ7); similar to ATSBT1.3, subtilase [Arabidopsis thaliana] (TAIR:AT5G51750.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT2G05920.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT3G14067.1); similar to subtilisin-like protease [Nicotiana tabacum] (GB:ABQ58080.1); similar to subtilisin-like protease [Nicotiana tabacum] (GB:ABQ58079.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71973.1); contains InterPro domain Protease-associated PA (InterPro:IPR0 Range:  from: 26889117    to: 26891805    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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