Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------WOX13(1)        --------->HSFB2a(2)                                                       --------->ATHB12            <---------HSFC1(1)                                            --------->ANAC58                    --------->GLK1(2)     ---------->ID1            <---------ARR11(3)     <---------YAB1        --------->AHL20(2)     -- ------>ICU4           --------->AtLEC2     --------->ANAC58        ----------->GT1<---------HSFB2a(2) ->ANAC58           <-------TEIL       --------->bZIP60(1)   <---------------AGL15<---------LBD16 <-- ->ANAC58        --------->GLK1(1)<----------DOF2   <----------DOF2 <---------TOE2(3)           <----   atgtttagtcgtttaggggaaattcatgcacaatttctttgatgccacgataagctttgattgcaaatttaagttaaaaaaaattctggaagctagtttt  26881400                                                                              <---------At4g35610                                                                             <---------DOF5.7(2)                                                                           <---------MYB52(1)                                                                   <---------TOE2(2)                                                                  >>>>>>>>>NAP--------->At4g35610                                                                <---------ANAC55(2)                                                                --------->ANAC58                                                                --------->ANAC46                                                                --------->ANAC55(2)        --------->AHL20(2)          --------->YAB1                                        --------->ANAC58------->GAMYB  ------         ----------->GT1                                        --------->ANAC55(1)       --------->AHL20(2)         <---------YAB1                                    --------->ANAC46--------->DOF5.7(2) <-----       <---------ICU4                                     <-------TEIL    --------->TOE1(3)--------->AHL20(1) ------->ATHB12     --------->LBD16                  --------->AHL20(2)   --------->TOE2(3)<---------AHL20(2) -------YAB1        ------>ZmHOX2a(1)                <---------AHL20(2)  <---------ANAC46 <---------AHL20(2) -------GT1        <---------LBD16                 ----------------------->TaNAC69(2)<---------ALFIN1   atcatttgataatgaaaatttcctggcaaacgagagtcgagtcgagtcgaggtatttaaatacatcacgtaagtttcgttaactgccccaaattaaatta  26881500                                                                                        ------>MYB83                                                                                      <---------MYB59                                                                                      <---------MYB46(2)                                                                                      <---------MYB111(2)                                                                            <---------ANAC55(2)            <---------GLK1(2)                                               --------->ANAC55(2)           <---------HSFC1(2)                                              <-------TEIL--------->MYB55(1)           <---------At4g35610                                        <---------AHL20(2)--------->MYB52(1)           --------->HSFC1(2)                                         --------->AHL20(2)------>MYB46(1)           --------->At4g35610                                   <---------AHL20(1)   <---------MYB111(1)        --------->At4g35610                                   --------->AHL20(2)    ------>MYB83        <---------At4g35610                        ----------->GT1--------->AHL20(2)=================      <------ZmHOX2a(1)                          ---------->DOF2 <---------AHL20(2) -------->P      -   <-----------RAV1(2)                      --------->TOE2(3) <---------AHL20(2)  <---------MYB46(2)- --->AHL20(2)                              --------->YAB1    --------->AHL20(2)   <---------MYB59---- ----AHL20(2)      ------>ZmHOX2a(1)<----------ID1--------->DAG2 --------->AHL20(1) ------>MYB46(1) -   aaaacacaggagcagcttctcctaatccaaaatccaaaaaaacaaacatcaaaaagtcaaaaattaaaatatttaaatacataacctacctaacaaggtt  26881600              ===================================bZIP_DOF              --------->TGA1a              <---------TGA1a                                    <---------AHL20(2)              <---------O2                                       --------->ATHB12             ------>NtERF2                                      --------->AHL20(2)          <-----------HVH21                                     <---------AHL20(2)          ------>NtERF2                                        <---------YAB1         --------->ANAC58                                   <---------MYB52(1)         --------->ANAC58                                   <---------YAB1         --------->ANAC46                                 ----------->GT1        <---------LBD16                                 --------->ARR11(3) =======================MYC_MYB       ---------->DOF2   <---------ARR11(3) -------->ANAC46            --------->AHL20(2)         --------->RVE1(1) -------->ANAC58       --------->ANAC58                --------->CCA1(1) ------->HVH21--------->O2  --------->ICU4     ----------->RAV1(1) <---------WOX13(1)     <----------DOF2 -------->ANAC58       --------->ANAC58        ------->TEIL--------->TOE2(3)     ----------->GT1   tgacgcaaaacccgccacgagtctaacgcatttattaagagaaagtatgcaccaaaaatatcgttattaattgactaagtagaccgataaaactttattt  26881700                           ----------->RAV1(1)    --------->ATHB12                          <----------ID1     <---------YAB1     <---------ZAT18                    <---------AHL20(2)   <---------TOE2(3)      --------->ZAT18                   --------->AHL20(2)  ----------->HVH21     <---------At5g28300  *TSS                 --------->YAB1      <----------DOF2       <---------SPL7--------->ANAC46          --                <---------YAB1    --------->GLK1(2)    <------MYB46(1)  --------->LBD16       ------>ZmHOX2a(1)           <---------At4g35610    --------->ARR11(3)   <------MYB83 <----------DOF2       <---------SPL7           --------->At4g35610    <---------ARR11(3)  --------->MYB59   <---------LBD16 ---------->ID1   aagagattaatggagctcataataaatagcaacaaaaatctttgacgatgaatgatttggtcttaccgcgcttccacggttctaatcttcgtcgtcctct  26881800                                               ----------->GT1                                           --------->LBD16                                          <---------HSFB2a(2)                                          --------->HSFB2a(2)                                          --------->ANAC46                                         <---------LBD16<---------YAB1                                       --------->ARR14(2)  <---------YAB1                                <------------AtMYB77  --------->YAB1                            <----                         <---------ZAT2<---------ARR14(2)<---------ICU4       <----------DOF2   -----  ---------->DOF2        --------->At4g35610  --------->ANAC58        <---------ZAT6           <----- ------->YAB1            <---------At4g35610  --------->ANAC58    --------->ZAT14  <-----------GT1  <   ctgataaagagacagagagagagagagagctgaaactgccatttccgcaaggtaattcatcattcttctgtagtcttaagctttgttcccgttccatata  26881900                                      --------->ZAT14          ---------->DOF2             --------->REM1(2)       <---------HSFB2a(2)            <---------ZAT14       --------->HSFB2a(2)           <---------ANAC46 <---------------AGL15     --------->GLK1(2) --------------->AGL15    <---------GLK1(2)               ------>ZmHOX2a(1) -----ARR11(3)            <---------ARR14(2)     <----------DOF2       <----------DOF2 ---->ARR11(3)            --------->ARR14(2) --------->ZAT18        ------->TEIL   <----------DOF2 ----CCA1(2)             <---------At4g35610 <---------ZAT18     <---------ATHB12  ------------------ -----------------AGL3<---------At4g35610 <---------ZAT6 --------->TOE2(3) ---------->ID1   tctctgtttttagaaagttgtttctgcagattccaagttgtgtagagttcgcttaatttcctcagcaatgaatctttttcgttttctttgttcgattcag  26882000                                                                            <---------MYB46(3)                                                    --------->GLK1(2)  <---------ARR11(3)                                                   --------->ARR14(2)  --------->ARR11(3)                                                   <---------GLK1(2)  --------->YAB1                                      <---------WRKY18(1)        <----------DOF2      --------->AHL20(1)                                     --------->WRKY45            <---------DAG2       <---------AHL20(2)      --------->ATHB12               --------->WRKY12          <---------At4g35610    <---------AHL20(1)     <---------AHL20(2)            <-------GAMYB   <---------ARR14(2)<---------YAB1  --------->YAB1     <---------YAB1      --------->WRKY38(1) --------->YAB1    --------->At4g35610   --------->AHL20(2) --->WRI1             <---------YAB1 --------->WRKY38(1)    ------>ZmHOX2a(1)    <---------YAB1     <   agttttttttattggggttttattatgttgactcgagggttgactaagcatcagattctgtcctcagctttatgatattggttacaattatattcgttga  26882100           <----------DOF2                                     --------->LBD16               <-------    <---------At4g35610                                      <-----------RAV1(2)           --------->ATHB12    --------->ZAT2                                           <---------LBD16              <---------YAB1    <---------ZAT2    ------>ZmHOX2a(1)             --------->ARR11(3)                 <---------DAG2    --------->At4g35610             <---------ANAC58<---------ARR14(2)           --------->TOE2(3) -----------GT1<---------AtLEC2     <---------ANAC58--------->ARR14(2)<---------ANAC46 <----------DOF2   attttcagcttagctttgaatgtcctaaacttgttcttacttggtgttcttgcagttcttgtttcaggggttttgtatatttgcctcaacttttcattga  26882200          <-----------GT1       <---------AHL20(2)      <---------AHL20(1)      --------->AHL20(1)      --------->AHL20(2)      <---------AHL20(2)    ------->TEIL --------->ANAC46        <--------P --------->ANAC58<---------ANAC55(2)                                                             <--- --------->ANAC58--------->ANAC55(2)                                                  --------->AHL20(2) --WOX13(1)<---------AHL20(2)                                                         <---------AHL20(2)   ttcacgaatttatttcattacatgatggtaagtttctaaatgtctatgccctcaaataaacgaggtttgattttgtttttcttactaatttataaactca  26882300  Previous    Next  AGI:  At5g67340.1    Description:  armadillo/beta-catenin repeat family protein / U-box domain-containing protein. similar to binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G23140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71963.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 26881782    to: 26884828    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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