Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                               ------                                                                      <----------DOF2        <------ZmHOX2a(2)                                                                    <-------TEIL           <---------At4g35610                  --------->ANAC46                                 <---------ARR11(3)  <-----------HVH21                  <---------O2                                    <---------GLK1(2)   --------->ALFIN1                  --------->O2      --------->HSFB2a(2)     --------->ZAT14        <---------AtMYB61           <---------KAN4(2)        <---------HSFB2a(2)   --------->At5g28300   --------->ALFIN1<----       <------NtERF2            <---------ARR14(2)       ----------->GT1 <---------HSFB2a(2) ========      --------->LBD16       ------>NtERF2             --------->MYB52(1) --------->HSFB2a(2)<--------    <---------LBD16      ------>NtERF2     <-----------HVH21<---------ZAT14  --------->DAG2--------->At4g35610   agcctagccggagaataaacacgtcgatgccgaggtttcgagagaggtcacgaagggaacggtgaacaggttctttgagaaggtggaggtgtccgatcac  26874000                                                                 <---------ATHB12            --------->ARR14(2)                               <---------ZAT14       ------>MYB46(1)                                   <---------ALFIN1       -------->P   <------NtERF2                     --------->ANAC58       ------>MYB83 --------->At5g28300               --------->ANAC58  --------->LBD16       --------->MYB52(1)                             --------->ANAC55(1)------>NtERF2 ------>LBD16      ----------->GT1                    --------->ANAC46<---------LBD16 --->MYB52(1)     <---------ANAC46                 --------->TOE1(2)--------->ARR14(2) -----LBD16 <---------ARR14(2)       <----------DOF2 --------->SPL7 <---------ARR14(2)             -- =================HOX2a_HOX2a   <---------At4g35610--------->TOE2(2)------->TEIL                 <--- ---HVH21  <------ZmHOX2a(1) <<<<<<<<<TBF1 ------>ZmHOX2a(2) --------->ZAT14            ----------->GT1   cggaaaacctacaggatttggcggtaaattcttcttctgctttgatcggaaaacatacgccactgcaatgaatccggccatgagagcgagtagaaacaaa  26874100                                                                                                -----                                                                                            ---------      ----------->HVH21                                                                     ---------    <---------At4g35610        <---------HSFB2a(2)  --------->HSFB2a(2)                    <---------YAB1    --------->At4g35610        --------->HSFB2a(2)  <---------HSFB2a(2)                   <---------AHL20(1)  --------->YAB1              <---------LBD16      <---------LBD16                        --------->AHL20(1)  <---------ICU4       --------->ANAC55(2)      <---------GLK1(2)                         <---------AHL20(2) <---------ATHB12      <---------ANAC55(2)    <---------YAB1----------->GT1              --------->YAB1 ------->WOX13(1)      --------->ANAC46      <---------TOE2(2)     --------->AHL20(2)   <---------YAB1 ------ATHB12          --------->ANAC55(1)   <---------TOE1(2)     *TSS --------->MYB52(1)--------->AHL20(2)   tcaatcatctcacccattcgtgaacacataattctggagactagtcgcatgattctggagagtagtcaaaaaaataccagaggtctcactattataatat  26874200                                                                          <------NtERF2                                                                     <------MYB46(1)                                                                     <------MYB83                                                                    --------->ALFIN1                          --------->ZAT18                          <<<<<<<<<MYB98                          <---------ZAT18                          --------->ALFIN1                --     --------->At4g35610<---------------AtSPL8 ----------->GT1     <--------P                   <----    ------------------------>ANAC81  --------->HSFB2a(2)          <---------ANAC58          <-------- ---->CCA1(2)    ---------->DOF2     <---------HSFB2a(2)          <---------ANAC58       <----------- >YAB1----------->GT1---------->DOF2<---------LBD16             <---------MYB46(3)     --------->ARR11(3) >AHL20(2)  ---------->DOF2       <---------AGP1      --------->AHL20(2) ----------->GT1--------->ATHB12   acgagggagcgaaaaaaagaaaagaaagtgtacatagttctggagagactagtcaaaaatatacgatgggttgggccgaaaaatatgaagttattggtta  26874300                                                                       --------->ARR11(3)                                                         <---------ANAC46                                                      <-----------RAV1(1)                        --------->ATHB12          <----------DOF2      <---------ARR11(3) ------->ATHB12  --------->GLK1(2)        <---------TOE2(3)   <------------CBF --------CBF --------->TOE2(3)          ---------->DOF2  --------->ETT(1)       *TSS             <--- -MYB46(3)   --------->YAB1  <------MYB83 <---------TOE1(3)<------NtERF2   <---------ANAC55(2)   ---- -CBF       <---------YAB1   <------MYB46(1)      <---------DAG2      --------->YAB1----------->GT1   ttgataggcccattacgataatctagtgatttggttacccagtaaaggtttactttttgtcggagattgcaaatatcatgtgagaagagtttataatctc  26874400               <------NtERF2              ------>NtERF2        <----------DOF2             <---------DEAR3(1) <---------ARR11(3)             ----------->HVH21  --------->ARR11(3)                          --------->ARR14(2)     <----------DOF2           <---------At4g35610                          <---------ARR14(2)  <---------ARR11(3)           <---------GLK1(1)                           <------ZmHOX2a(1)  --------->ARR11(3)           --------->GLK1(1)                    <---------TOE1(3) <---------GLK1(1)        <---------LBD16                           <---------TOE2(3) --------->GLK1(1)   <---------ANAC58                              ---------->DOF2 ------HSFB2a(2)     <---------ANAC58              ----------------->AGL3--------->MYB59 <---------At4g35610 ----->HSFB2a(2)  <---------MYB52(1)            ---------->ID1    <---------AHL20(2) --------->ALFIN1   gagaaatctttttgggcgacgttgtttgctcggagctctttctccgatttgtctccattttcggtgatttaaagttaggatttggctgtggagatgtctt  26874500                                                 <---------------AtSPL3                                                 --------->MYB59                                                 <---------------AtSPL8                                                <-----------RAV1(2)                                            <------ZmHOX2a(1)                                 -------                                         <---------LBD16                                   ----------                                    --------->ARR14(2)                                  <---------AHL20(2)                                    --------->ARR11(3)                                <---------RVE1(1)                                   <---------GLK1(1)                                 --------->ARR14(2)                                   <---------CCA1(2)                                 <---------GLK1(2)        --------->LBD16            --------->GLK1(1) <-------TEIL                    <---------ARR14(2)    --------->TOE2(2)             <---------MYB52(1) --------->SPL7 <----------DOF2--------->LBD16  -------->P         <-----------GT1<---------ARR11(3) ----------->GT1           <---------LBD16 <---   cacttacctccgtcgaattgaattttctggttttccgatatcttcaggaatcaggtacgataaatatagactttctatgttctcgcggatttttttgtac  26874600                            <---------At4g35610                          <--------P                         <---------MYB52(1)                                  <---------ANAC58                        --------->LBD16<---------TOE2(3)                     <---------ANAC58 --->ID1               <---------HSFB2a(2)                             <-----------RAV1(1) ----->AtSPL8          --------->HSFB2a(2)<---------ARR14(2)        <-----------RAV1(1) -------DOF2          <---------LBD16  <---------TOE1(3)        <---------YAB1           ------->TEIL   ttttgtttttgaatttgtatgtgttccggtagctactggctgaggttttggatttgatttcgaattgtgaatgttgttgccttgttctacgaatttagaa  26874700                                                                    ===============================HOX2a_HOX2a                                                                    ------>ZmHOX2a(2)                                                                   <---------GLK1(1)                                                                   <------ZmHOX2a(2)                                                                  <-----------ARR10                                                                  <---------ARR11(3)                                                                  --------->ARR11(3)                                                                  <---------ARR14(3)                                                                  --------->ARR14(2)                -                                                                  --------->ARR14(3)          <------ZmHOX2a(2)                                                                  <---------ARR14(2)         --------                  --------->ARR14(2)                             ====================================HOX2a_HOX2a                  --------->ARR11(1)                             <------ZmHOX2a(1)           <-------                  <---------ARR14(2)                           <---------TOE2(3)            =========              <---------LBD16                                  <---------TOE1(3)            =========             <---------ANAC58                             <---------ZAT6                    <------ZmHOX2a(1)             <---------ANAC46                 --------------->AGL15<---------HSFB2a(1)   <-----------RAV1(2)             <---------ANAC58                 <---------------AGL15================================HOX2a_HOX2a   ttgttttagttgttttcgtggattcggcttagggtttcagcgatgttaccgaaaattgtagttttaaggatcttcgtaatgtctccatagctcaggatca  26874800              <---------SPL7             <---------ANAC58             <---------ANAC58            <---------------AtSPL3    ------>ZmHOX2a(2)   <------ZmHOX2a(2)  --------->ARR11(3)  <---------ARR14(2)  <---------ARR11(3)          <-----------ARR10  <---------AGP1              <---------ARR11(1)  --------->AGP1--------->SPL7------->TEIL  --------->ARR14(2)          --------->GLK1(2)                                      --------->ARR14(2) <---------CCA1(2)            <---------ARR14(2)                       <---------ANAC58 ---------->ARR10             --------->ARR14(2)                       <---------ANAC58 ->ARR11(3) --------------->AtSPL8                                    <---------ZAT2 ------->TEIL --ARR11(3) --------------->AtSPL3      <---------YAB1    <-----------HVH21          <---------ARR14(2) ==========HOX2a_HOX2a       <---------ARR14(1)  <---------AtLEC2     --------->At4g35610 =========HOX2a_HOX2a        <---------CCA1(2)<-----------GT1    <---------HSFB2a(2)<---------CCA1(2)   tttagatcttctagttcgtactgctactcgcgaatctaggttttgatttttccatgtcgaggtcagtctgggagcttgagttttctgtatctgaagactt  26874900  Previous    Next  AGI:  At5g67310.1    Description:  CYP81G1 (cytochrome P450, family 81, subfamily G, polypeptide 1); oxygen binding. similar to CYP81D1 (CYTOCHROME P450 91A1), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G36220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71949.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) Range:  from: 26872442    to: 26874167    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g67320.1    Description:  WD-40 repeat family protein. similar to TAF5 (TBP-ASSOCIATED FACTOR 5), nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G25150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71955.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain LisH dimerisation motif, subgroup (InterPro:IPR013720); contains InterPro domain WD40 repeat (InterPro:IPR001680); contains InterPro domain LisH dimerisation motif (InterPro:IPR006594) Range:  from: 26874380    to: 26878345    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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