Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                -----                                          --------->ZAT2                                        <----                                  --------->ARR14(2)                                            -----                                  <---------ARR14(2)                                            -----                                 <---------ARR14(1)                                            ------                               --------->DEAR3(1)                                              <-----                              --------->ANAC58                                            <---------ARR14(2)                              --------->ANAC58                                            --------->ARR14(2)                              --------->ANAC46                                          --------->LBD16                             ------->TEIL --------->At4g35610                          <---------ANAC55(1)                           <---------ABI4(2)----------->HVH21                          <---------ANAC55(2)                        <------ZmHOX2a(1) <---------ZAT2                               --------->ANAC55(2)                      <---------TOE1(2)   <---------At4g35610                         ------>ZmHOX2a(2)                      --------->LBD16 <-----------HVH21                               <-------TEIL  -                      <---------TOE2(2)   ----------->RAV1(2)                        <------ZmHOX2a(2)                     <---------LBD16 --------->WOX13(1)            --------->ANAC58 --------->AGP1 <-               --------->HSFB2a(1)<---------ARR11(1)               --------->ANAC58 <---------ARR14(2) -------DOF5.7(2)    <-----------RAV1(2)<-----------RAV1(2)----------->RAV1(2)      --------->ARR14(2) ->DOF2        <---------HSFB2a(1)--------->GLK1(2)       ------>NtERF2           ----------->ARR10--   taaccttgtgcatcggaacagtcccaggatgcaccgaatccatcagctgacaatgaacagcgcctgaacaagcctataaatccatagatccgtattcaga  26858900                               --------->LBD16                              <---------ANAC46                                      <---------ANAC58                              <---------ANAC55(2)                                   <---------ANAC58                              --------->ANAC55(2)                                   --------->ANAC55(2)         ----------->GT1      <---------ANAC58                                      <---------ANAC46 ---ZmHOX2a(2)                <---------ANAC55(1)                                   <---------ANAC55(2) ---->AGP1                    <---------ANAC58          --------->YAB1              <---------ANAC55(1) -----ARR14(2)               <-----------------------TaNAC69(2)               --------->MYB46(3) ---->ARR14(2)             --------->ARR14(2)          <---------ATHB12      ------>MYB46(1) ---->ARR11(3)  <---------AHL20(1)                 --------->MYB46(3)        ------>MYB83 --->At4g35610  --------->AHL20(2)             <------ZmHOX2a(2)           --------->AtMYB61 ----At4g35610  <---------AHL20(2)            <---------ARR11(3)          --------->MYB46(3) -------->LBD16 --------->AHL20(1)         --------->HSFB2a(2)          <-----------GT1 --------HSFB2a(2)         <---------ARR14(2) --------->AGP1         --------->ANAC58              <- ------->HSFB2a(2)  <-------TEIL           <---------HSFB2a(2)       --------->ANAC58--------->LBD16   tccagaagaaacagataataaattcatcaaatccgtgttcaatttccagatcaacaaatcaaaacacagataagaaaccacccattccgtattcaaatac  26859000                                        ====================================HOX2a_HOX2a                                        <------ZmHOX2a(2)                                        --------->CCA1(2)                                       <---------ARR11(3)                                       --------->AGP1  --------->LBD16                                       --------->ARR11(3)                                    <---------TOE1(2) --------->ANAC46        --------->ZAT14           --------->TOE1(2)--------->ARR14(2)      --------------->AtSPL8     --------->YAB1    <---------ARR14(2)     <---------At5g28300      --------->YAB1   ----------------->AGL1<------ZmHOX2a(1)    <-----------GT1--------->HSFB2a(2) <---------ARR14(2)         <-----------RAV1(2) --------GLK1(2)   <---------HSFB2a(2) --------->ARR14(2)        <-------TEIL       <-----------GT1   agaatttcaccgtacttgttactagaagacgataatcgtaagatccaattccaaatccgaaactaggttcaggaagagaagcgattttactcaatagatt  26859100                                                                   --------->ANAC58                                                           <------ZmHOX2a(2)                                                           --------->GLK1(1)                                                           <---------GLK1(1)                                                          --------->ARR14(2)                                                          <---------ARR14(2)                                                    <---------HSFB2a(1)                                                    <---------GLK1(1)                                                   --------->GLK1(2)                                                   <---------ARR14(2)                    >>>>>>>>>>>>                                            --------->ANAC46     ------>NtERF2        <---------ICU4                                            --------->ANAC58    --------->LBD16      <---------ATHB12                                            --------->ANAC58------>ZmHOX2a(2)   --------->GLK1(2)<---                                  <---------ZAT6   --------->ARR14(2)           <---------ARR14(2)                                  ----------->GT1 --------->ARR14(2)            --------->ARR14(2)        <----------DOF2       <---------ZAT14     <---------GLK1(2)--------->ANAC58--------->WOX13(1)   acctcttcgactttggagagattgagttggagagtagagttaatccaagccagaatctccgatctcccgacgaaatatgcagaatccatcatcccaatgt  26859200                                                             --------->RAP2.6(3)                                                 ----------------------->TaNAC69(2)                                                ------>ZmHOX2a(2)                                              --------->ARR14(2)                <--------------------                                              <---------AGP1--------->MYB52(1)  <------ZmHOX2a(1)                                              <---------ARR14(2)    <----------DOF2                    <---------TOE1(2)      --------->HSFB2a(2)    <----------DOF2                ---- >>>>>LFY           <---------TOE2(2)      <---------HSFB2a(2)<------------MYB.PH3(1)  <----------ID1 ----TEIL          <-----------RAV1(2) <----------DOF2     ----------->HVH21--------->ICU4      -----   tcgtagccatcttcgattttctcaggtttctctctctggttctttctcgatctgtctctctctaacggctcttttgaaattaggagaagagaacaaagat  26859300                                                    --------->ANAC46                                                   --------->MYB46(3)                                                <-----------GT1                                              <----------DOF2                                             <---------ICU4                                           <-----------ARR10                                           <---------ARR11(1)                                           --------->GLK1(2)                                           ------->TEIL                            <-----------GT1                                           --------->ARR14(2)                  <--------HAHB4                <---------At4g35610        <---------ARR14(2)                 <---------YAB1           ==============================================bZIP_DOF             --------->ICU4           <---------TGA1a                <---------CCA1(2)              --------->LBD16         --------->CCA1(2)           --------->ARR14(2)                 <---------ANAC46        <----------ID1               <---------ARR14(2)                ------>ZmHOX2a(2)    ---------->DOF2                 --------->CCA1(1)                  <---------LBD16    =================bZIP_DOF       --------->RVE1(1)                 <------ZmHOX2a(2) -WRI1 *TSS<---------O2  ------------>CBF <---------ARR14(1)         --------->ARR14(2) ------->GT1    <---------------------WRI1<---------GLK1(2)          <---------ARR14(2)     --------- ---->CCA1(2)   --------->At4g35610 <---------GLK1(1)            <---------LBD16 <---------YAB1   agaaaataaagagacgagagcggagttttcaattcaaaatatccgaatctttacccgctctcgatatttcggatccgggtattattaacagaattaggct  26859400                                        --------->MYB46(3)                                       --------->ANAC46                                       <-----------------AGL1                                       --------->ANAC58                                       --------->ANAC58                                      ------>MYB83                                      -------->P                                      ------>MYB46(1)                                     <---------ALFIN1                                       <--------                                 ------>MYB46(1)                                            <--------                                 ------>MYB83            <---------YAB1                     ---------                               <---------ALFIN1       <---------YAB1                       --------->AHL20(2)                               ------->GAMYB          <---------AHL20(2)                   <---------AHL20(2)                               --------->AtMYB61     --------->YAB1                  ----------->GT1                              <---------MYB55(2)     --------->AHL20(2)        --------->ANAC58     <    ---------->DOF2           --------->MYB46(3)     <---------AHL20(1)        --------->ANAC58  ---- >MYB59     ---------->DOF2 <-----------GT1        --------->ICU4          <-----------HVH21---------   aattactaaagcccaaaagcccatcttatttaaccacccctacccaataggccaatattattatgggaaacaaattgtgtcacacaatagaaaataaatt  26859500                                                            --------->ANAC46                                                            --------->ANAC58                                                            --------->ANAC58                                             --------->AHL20(1)    --------->ANAC58                         --------->AHL20(2)            <------ZmHOX2a(2)    --------->ANAC58                         <---------AHL20(2)           --------->ARR11(3) -AHL20(1)             --------->ZAT6        <---------AHL20(1)    ---------->DOF2        --------->WOX13(1) -AHL20(2)      <---------YAB1              <---------AHL20(2) --------->RAP2.6(2)      <---------ATHB12 >AHL20(1)    --------->CCA1(2)             --------->AHL20(2) ----------->RAV1(1)  <---------ANAC58 -----------GT1 <---------AHL20(2)        --------->YAB1    ------------------------>ANAC81 ------->GT1 --------->ARR11(3) --------->YAB1            --------->At4g35610       <---------ANAC58 >AHL20(2)   <---------ARR11(3) <---------ICU4          --------->YAB1    <---------ARR11(3)     ----   tgtaacaagcccagagatataattgtcactaaaatcataaccaaaaataaattcaaaatcagaagccacaaaagaagatcaaacttgcctatcaatctaa  26859600                                                        <---------ZAT6                                                    <---------YAB1                                                  <---------ICU4                                                  --------->YAB1                                                  <--------HAHB4                                               --------->YAB1                                              <---------YAB1                                            <--------HAHB4                                            --------->ATHB51                                            <---------ICU4                                            <---------AHL20(2)                                            -------->ATHB1                ----------->GT1             --------->YAB1        --------->ANAC46                   <---------YAB1                               --------->ARR11(3)     <---------ZAT14            <---------ANAC58 <---------YAB1                         <---------ARR11(3)     --------->ZAT14         <----------DOF2-------->HAHB4                           --------->HSFB2a(2)     --------->ZAT18    <-----------GT1    <---------ATHB51                          <---------HSFB2a(2)     <---------ZAT18   <-----------GT1     --------->ICU4  --------->WRKY38(1)--------->GLK1(2)     <-------TEIL <---------ARR11(3)    --------->ICU4  <-----------RAV1(1)  <---------GLK1(1) ----->ZAT6  --------->WRKY18(1)<---------ANAC58<-----------GT1              <---------GLK1(2) ------   ctctaagtacacacagtcaagttatttaactctttcttggtcttaattattatcattactgttgactagaatgaacagggaatctctcgagaacttgcaa  26859700                                           <---------STY1(2)                                           --------->STY1(2)                                           --------->ZAT2                 <---------GLK1(2)                                          --------->ANAC46               <---------At4g35610                                          --------->ANAC58               <---------ZAT2                                    --------->ANAC58               ----------->RAV1(1)      --------->YAB1                --------->ANAC58           --------->ANAC58   <----------DOF2                 <-----------------------TaNAC69(2)<---------ALFIN1          ------ ---->DOF2            <-----------RAV1(1) --------->ANAC58     --------->ANAC58  <----------DOF2   agcctctttgatattgggccttctctgtggtattggagacgcacaagctaggcccattttcaaacatgccaacacagcttcttctttgccttctaactca  26859800  Previous    Next  AGI:  At5g67270.1    Description:  ATEB1C (MICROTUBULE END BINDING PROTEIN 1); microtubule binding. similar to ATEB1B (Arabidopsis thaliana Microtubule End Binding Protein EB1A), microtubule binding [Arabidopsis thaliana] (TAIR:AT5G62500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71920.1); contains InterPro domain EB1, C-terminal; (InterPro:IPR004953); contains InterPro domain Calponin-like actin-binding (InterPro:IPR001715); contains InterPro domain Calponin-homology (InterPro:IPR016146) Range:  from: 26857296    to: 26859307    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g67280.1    Description:  RLK (RECEPTOR-LIKE KINASE); ATP binding / kinase/ protein serine/threonine kinase. similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G37250.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G23300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71921.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47862.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (I Range:  from: 26859496    to: 26862416    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version