Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                    <---------------AtSPL8                                        ---                                --------->AHL20(2)                                           --------                       --------->ANAC58                                                    <---------ANAC58                  --------->At4g35610                                                      <---------ANAC46                  <---------At4g35610----------->GT1          <---------YAB1               <---------ANAC58       --------->TOE1(3)        <---------AHL20(2)   --------->YAB1                        --------->At4g35610      --------->ZAT6   --------->ANAC58           --------->YAB1                  <---------YAB1 <--- ---ALFIN1 --------->STY1(2) --------->YAB1     <---------TOE2(3)       <---------ZAT6   <-----------GT1   attgcataaccctagctattagctgaagcaagaataaaatggtaagaactaagaataataagttgtcattgtaagtgttaagttgtgatagttacctgca  26845000            <---------AHL20(2)    --------->AtMYB61        <----------DOF2           ------->GAMYB                                           <---------ANAC46    <----------DOF2              --------->MYB46(3)                                      ---------->ID1 -------ARR14(2)                --------->ANAC58                                   --------->AHL20(2) ------>ARR14(2)                --------->ANAC58              <------ZmHOX2a(2)    <---------AHL20(2) ---------ARR10             --------->ANAC58                  ========================HOX2a_HOX2a -------ARR11(1)            --------->ANAC58                 <---------ARR11(3)------>ZmHOX2a(1) -------ARR11(3)           --------->DAG2                   <------ZmHOX2a(1) <---------MYB59 ------>ARR11(3)          ---------->DOF2 <---------ICU4    =======================HOX2a_HOX2a ->AtLEC2   --------->AHL20(2)  -------->P--------->ATHB12<---------TOE2(2) <------ZmHOX2a(2) ------CCA1(2)       ---------->DOF2     <---------YAB1   <---------TOE1(2)--------->ARR14(2)   aatcttctttctttttaaatgtcaaaagaaaagcaaccaaaacatcattggaacgtctcgcaggatcactcaaactcgatcctaattttttgtcgtaaac  26845100                                                         <---------WRKY18(1)                                                      <---------ANAC58                                                      <---------ANAC58                                                     <---------STY1(2)                                                     --------->STY1(2)            --------->YAB1                                               --------->ZAT14             <---------MYB52(2)                                               <---------ZAT14        --------->ANAC58                      <---------MYB52(1)     --------------->AtSPL3   --------->ANAC58              -                  ------>ZmHOX2a(1)          --------------->AtSPL8   --------->ANAC46      ---------   atttagaaattccttccatcctccgttctcgccttccaaacctcgtttctgtactagcttgactaggtctactagcaactaaaatcaaaatcccatgaca  26845200                                                                      --------->DOF5.7(2)                                                               <---------------AtSPL3                                                               <---------------AtSPL8                                                               --------------->AtSPL3             <--                                                               --------->ALFIN1                   ---                                                       --------->ARR11(3)                         ---                                                       <---------ARR11(3)   ---------->DOF2       <--                    --------->GLK1(2)                 --------->RVE1(1) --------->MYB52(1)        <--       <-----------GT1                                --------->CCA1(1) <---------DOF5.7(2)       --- -------->YAB1     <---------GLK1(2)         --------->At4g35610   --------->SPL7       <---------DAG2 -->HVH21  ---------->DOF2                   <---------At4g35610 <---------SPL7         <----------DOF2   aattagaattcaccaaagtcagaatttgaagagaatgagagttttttagctgagaaatatctagtgtggtacgataacgaaagagacttacttttttctc  26845300                                                                       <---------ANAC46                                                                      --------->ATERF1(1)                                                                     <---------ORA47(2)                                                                     ------>NtERF2                                                                     <---------ATERF1(1)                                                                     <---------ERF1                                                                     <---------DEAR4(2)                                                                     <---------RAP2.3(1)                                                    <---------ANAC46--------->ATERF1(2)                                                 --------->ARR14(2) <---------RAP2.3(2)                                                 <---------ARR14(2) <---------RAP2.6(2)     <---------ANAC58                          --------->ABI4(2)    <---------ANAC46     <---------ANAC58                          --------->MYB55(2)   <---------RAP2.3(3)   <---------MYB46(3)                          <---------MYB46(3)   <---------DEAR3(1) -------At4g35610                             --------->ALFIN1     --------->ATERF1(1) ------>ZAT14                              <---------DEAR3(1)      <---------ABI4(1)         <------- ------>ZAT2                              <---------ORA47(1) ---------->DOF2                <-------- -------ZAT2                              --------->SPL7 <---------At4g35610               --------->ALFIN1 -------ZAT14                           <---------SPL7   <-------GAMYB<------NtERF2       --------->ALFIN1 ------>At4g35610                       ----------->HVH21--------->At4g35610     ---------->DOF2*TSS   agcagtggctagtttatgctccattaccaagagtttttttgacggacggtggttctgtgagttgaaagaggcggcgagttggagaaaggagagttgggga  26845400                                                <---------AHL20(1)                                                <--------ATHB1                                                --------->YAB1                                                <---------ICU4                                                --------->AHL20(2)        --------->AHL20(2)                                                <---------AHL20(2)        <---------AHL20(2)                                               --------->ICU4   <---------HSFC1(2)                 <-                                             --------->YAB1     <---------At4g35610              ----                 <---------TOE1(3)    <---------ANAC58     --------->HSFB2a(2) <---------At5g28300<--   ------------>CBF             <---------AHL20(2)         <---------HSFB2a(2)<-----------GT1 ------>ZmHOX2a(1) --HSFB2a(2)     <---------TOE2(3)    <---------ANAC58    <---------LBD16 <---------YAB1   ------>ZmHOX2a(1) -LBD16 --------->YAB1      <----------DOF2 <---------AHL20(2)  --------->HSFC1(2)      ---------->ID1   agacggacaatcgaaatttagggttttattcttttttatttcttgtttaataattttagttcgggaagcttatgttttaattactgttttgtcctcctat  26845500                                --------->AHL20(2)                                <---------AHL20(2)       <----------DOF2      <---------RVE1(1)  --------->YAB1           <---------GLK1(2)              <---------TOE1(3)         --------->ATHB12 ----------GT1             --------->ARR11(3)       <<<<<<<<<<MYB80                ------>ZmHOX2a(1) ----->AHL20(2)   <---------AHL20(2)       <---------TOE2(3)   --------->ATHB12    <---------YAB1<--- -------AHL20(2) --------->AHL20(2)   <-----------GT1     <---------TOE2(3) --------->ANAC46<--------   ttaatcttactttgtttgataaaatttcagatttttaattttactaatgtttttggtttgaaggtttattgctaatataagcctcctcattggtccgttt  26845600                                                             --------->ARR11(3)                                                             <---------ARR11(3)                                                       <<<<<<<ZML2                 <-----------GT1                            ------>ZmHOX2a(1)       --------->HSFB2a(2)          <-----------GT1                      <---------ALFIN1              <---------HSFB2a(2) <-----------GT1         ----- --------GT1          --------->AtMYB61             --------->HSFC1(1)<----------DOF2           ----- -ANAC46      <----------DOF2                  <-------TEIL  --------->GLK1(2) <---------AHL20(2)   <   aacacattgaagaagtctttgagaccactcctagtgtatttatctctgattcatctagaacaaaatctatgtctttactattttttctcaattctgaaat  26845700                                                                               ======================HOX2a_HOX2a                                                                              <------ZmHOX2a(2)                 --------->YAB1                                               =======================HOX2a_HOX2a         <------MYB46(1)                                                     <---------ARR11(3)         <------MYB83----------->GT1                 <---------ZAT14         --------->ARR11(3)         <---------MYB46(3)               <---------CCA1(1)            <---------At4g35610     <-----------RAV1(1)                  <---------RVE1(1)       <----------DOF2 ---->ICU4    --------------->AGL15      --------->ARR11(3)       <---------DAG2       <---------TOE1(2) ------>GT1   <---------------AGL15      <---------ARR11(3)      <---------DAG2------>ZmHOX2a(2) ---------AHL20(2)   <---------ANAC55(2)--------->YAB1      <-----------GT1 --------->GLK1(1) ------>ZmHOX2a(1)   gtttattttgttggttcaatattaagtaaaatttgtaatgtatgatattttagagtgtattgaaaccccttttggctgagatctcatcatatgttcctaa  26845800                                                                <---------ANAC46                                                                <---------ANAC58                                                                <---------ANAC58      --------->ARR14(2)                                                            <---------ANAC58          <---------ARR14(2)                                          <---------AHL20(2)<---------ANAC58          ------->TEIL                                          --------->AHL20(2)<---------ANAC46         <---------CCA1(2)                              ----------->HVH21          <---------MYB52(1)   <-----------GT1            <---------TOE2(3) --------->WRKY12          <-------GAMYB      <---------REM1(1) <---------AHL20(2)   <-------TEIL    ------>ZmHOX2a(1)<-----------RAV1(1) ----------->GT1     <-----   aaatttatgtgttcaaggtatcgatgcattcgatgacctcctcattaattgttgtttctgttgcttacttgtacaagttgtaactatgtatctgtttctt  26845900  Previous    Next  AGI:  At5g67240.1    Description:  exonuclease. similar to exonuclease [Arabidopsis thaliana] (TAIR:AT3G50100.1); similar to OSJNBb0059K02.13 [Oryza sativa (japonica cultivar-group)] (GB:CAE04503.1); similar to H0212B02.12 [Oryza sativa (indica cultivar-group)] (GB:CAH68267.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Exonuclease, RNase T and DNA polymerase III (InterPro:IPR013520) Range:  from: 26841462    to: 26845396    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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