Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->ATHB12                                              <---------YAB1                                 --------                                           --------->TOE2(2)                                 --------                                           --------->TOE1(2)                                 --------                               ------->GAMYB <---------TOE2(2)                               ------->GAMYB                              <---------MYB46(2)                               --------->ZAT18     <-                              <---------MYB111(2)                      <---------WOX13(1)  <---------At5g28300          ---------->ID1      <---------MYB52(2)>>>>>>>>>ARR1        --------->ATHB12     <----------  ---------->ID1              <------------MYB.PH3(2)              <---------WOX13(1) --------->AHL20(2) <------MYB83                 --------->MYB46(3)>>>>>>>>>ARR2    --------->ATHB12     <---------AHL20(2) <------MYB46(1)              <---------MYB111(1)           <------ZmHOX2a(1)  <---------ZAT18-------   atttggtgttttgtttttttgtattcttcccaactaactccaaaacgtatgattgtagtttaggacttgattgatttatagttcacaatttataaccgta  26835800                                                              <-----------HVH21                                                            ------>ZmHOX2a(2)                                                          <---------ARR14(2)                                                          <---------ARR11(3)                                                          --------->AGP1      <---------WRKY12                                    <---------AGP1      <---------WRKY38(1)                               ----------->ARR10 --->GT1--------->At4g35610                        --------->ATHB12 ->TOE2(3)                                        <---------YAB1           <----------DOF2 ->TOE1(3)------->GAMYB      <---------DAG2--------->DAG2 --------->ARR11(3) ----------GT1    <-----------GT1         ---------->DOF2 --------->ARR14(2) -GT1--------->WRKY18(1)     <----------DOF2   <-------TEIL<------ZmHOX2a(2) -->At5g28300    <-----------GT1 <-----------GT1  --------->ICU4   <----------DOF2   <-----------GT1   aaaaccagtcaacagcattttaacccttacactttttactctcaaaaagtacatgattaagatctgtcactttcactcttttaaaatttaccagacgctt  26835900                                   --------->LBD16                                  <---------ANAC55(1)                                  --------->ANAC55(2)                                  <---------ANAC58                                  <---------ANAC58                               <---------ARR14(2)                         --------->ANAC55(2)                         <------MYB83<-----------HVH21                         <---------ANAC55(2)                         ----------->GT1                         <------MYB46(1)                                                           --                        <---------TOE2(3)                                                          --          --------->At5g28300---------->TaMYB80                                         <---------GLK1(1)       <---------At5g28300   ----------->ARR10                                          --------->GLK1(1)    <----------DOF2     --------->MYB46(2)                                      <------NtERF2      --    <---------WOX13(1)  --------->MYB59       <---------TOE2(3)                ------>NtERF2   ------ <---------YAB1 ----------->GT1--------->ARR14(2)                          <---------REM1(1)   <-----   attttgatttacggtgatttgttaattaggtaatatccgtgttagataaatgttattttctaagttgtattagagagatgtcgccttcagaaatctccca  26836000                                                              <---------AHL20(2)                                                              <---------ICU4                                                             --------->AHL20(2)                              --------->GLK1(2)            --------->YAB1                      --------->AHL20(2)                  <---------YAB1                     <---------YAB1                       <---------AHL20(2)   --------->At4g35610<---------AHL20(2)                 --------->AHL20(1)                 <--------  ------->TEIL       --------->ICU4                <---------HSFC1(1)            --------->YAB1 ------->ANAC46    <---------ICU4--------->HSFB2a(2)     --------->AHL20(2)     <---------YAB1 ------->ANAC58   --------->ICU4 <---------HSFB2a(2)     <---------AHL20(1)    --------->AHL20(2) ------->ANAC58   <---------ATHB51--------->LBD16  <---------HSFB2a(2)         --------->AHL20(1)   - ----->RAV1(1)    --------->AHL20(2)               --------->HSFC1(1)          <---------AHL20(2)   - ----ALFIN1       <---------AHL20(2)               --------->HSFB2a(2)        --------->YAB1---------   cacgaagctaaattttggaaataattaataagattccagagcaaattagtcttctagaatataataaatactactatacattataatacctctaccacat  26836100          <-----------HVH21          <-----------TGA1         --------->ETT(2)      <---------DEAR3(1)   <---------O2   --------->TGA1a   <---------TGA1a   <---------bZIP60(1)   --------->O2   --------->bZIP60(1)   <---------TGA2(1)   <---------bZIP60(2)   <---------ANAC46   --------->TGA2(1)  ----------->STF1      <------MYB83                <-----------GT1 <---------TGA2(2)      <------MYB46(1)         --------->AHL20(2) -ALFIN1<------NtERF2<---------MYB52(1)  <-----------GT1 ---------->HVH21  <---------YAB1    <---------AHL20(1)                    *TSS ---------->TGA1   ----------->HVH21<---------CCA1(2)                    <----------DOF2 -->RAV1(1)<---------MYB52(1)    <-------TEIL<----------DOF2     --------->AtMYB61                ---   ttgtgacgtcgtcgtcagtctctgataggtttgagttcatatatttcctttttaatacttctcaaaaccaaaacacttttgtttttaaaacagagtcatc  26836200                                              --------->DAG2                                       --------->ICU4                                  --------->ANAC58                                  --------->ANAC58                                  ----------->GT1                   --------->ZAT14                --         <----------DOF2         --------->DAG2     <---------ANAC46<---------ZAT14                --    ---------->ID1           <----------ID1  ---------->DOF2    --------->ZAT6                   ---- --->ZmHOX2a(1)----------->HVH21---------->DOF2  --------->ALFIN1 --------->ANAC46             ------   ctcttcgtcttctttctctgaccaaaacagagcgaaaagcaaaaatgaaaagtggagggaacacaaacactaaactcatacttgttcatccatacattca  26836300                                                                                      ------>MYB83                                                                                      ------>MYB46(1)                                                                                    ------->GAMYB                                                                                    --------->DREB2C(2)                                                                                    --------->DEAR4(1)                                                                                 <---------ALFIN1                                                                                 --------->DEAR3(1)       --------->ANAC58               <---------MYB52(1)                         --------->AtMYB61       --------->ANAC58             <---------ANAC58                            --------->MYB46(3)     ---------->DOF2                <---------ANAC58                          --------->ANAC46 ------->ANAC58                  <----------DOF2                    --------->ZAT6  --------->DEAR3(1) ------->ANAC58              ---------->ID1                      ------>ZmHOX2a(1)  --------->MYB46(3) ------>DOF2             <---------ANAC58                <----------DOF2      --------->REM1(1)<----- --->YAB1                <---------ANAC58 <----------DOF2<---------DAG2      --------->ZAT14 <-------   aaagcaaacaagcacaaatcgtctatggcttctcgctttcgtttctttcttcacaatcgcttttctcctaactcttctctacaccaccgactccatcatc  26836400                                 <---------RAP2.6(3)                                 ------>NtERF2                                --------->RAP2.3(3)                                <---------ATERF1(2)                                --------->RAP2.6(2)                                --------->RAP2.3(2)                                --------->DEAR3(1)                                --------->RRTF1(3)                                --------->RRTF1(2)                               --------->ERF1<---------RAP2.6(3)                           ------>ZmHOX2a(1) ------>NtERF2                           <---------ATERF1(1)<------NtERF2                    --------->DEAR3(1)      --------->bZIP60(1)                   <------NtERF2--------->ATERF1(2)                  ------>NtERF2--------->RAP2.3(1)                 <---------ALFIN1<-----------HVH21                 --------->DEAR3(1)         <---------ATERF1(2)                --------->MYB46(3)<---------MYB52(1)               --------->LBD16 --------->RRTF1(1) <---------ALFIN1               <---------ATERF1(1)<------NtERF2   --------->AtMYB61               ------>NtERF2 --------->ANAC46<-----------HVH21                  ------->GAMYB              --------->ANAC46<---------ATERF1(1) --------->DEAR3(1)           --------->MYB46(3)              --------->ANAC58------>NtERF2 <---------bZIP60(1)              ----------->RAV1(1)  <---------HSFB2a(2)  --------->ARR14(2)   --------->ATERF1(2)             --------->MYB46(3)  --------->HSFB2a(2)<-----------HVH21      --------->RAP2.6(2)            ------>MYB46(1) ----CCA1(2)  --------->ANAC58--------->LBD16<-----------TGA1              ------>MYB83 --ICU4      <---------LBD16 --------->DEAR3(1)  --------->MYB46(3)       --------->ANAC46   tcttctaaaaacaactccgccaccgtctcctccgccgtcaattctgccgtcaccaccgctaccatctctcagttaccaacaacagccatcaatgcaatgc  26836500                                                                              --------->At4g35610                                                                              --------->ZAT2                                                                              --------->ZAT14                                                                           --------->At4g35610                                                                           ------>NtERF2                                                                          --------->RAP2.3(2)                                                                          <---------DEAR3(1)                                                                          --------->DEAR3(1)                                                                        ------>NtERF2                             <---------ALFIN1                           --------->LBD16                           ===============================================MYC_MYB    ------>NtERF2                           -------->P                                   <---------ATERF1(1)                        --------->At4g35610                            --------->ANAC46                        --------->ZAT2                                 --------->DEAR3(1)                        <---------At4g35610                            <---------ALFIN1   --------->REM1(2)                        <---------ZAT2                          <---------TGA1a      --------->LBD16                   --------->ANAC58                           ------>NtERF2<---------At4g35610                   --------->ANAC58                          ----------->HVH21<---------At4g35610                   --------->ANAC46    <---------LBD16       --------->DEAR3(1)     --------->DEAR3(1)              <------ZmHOX2a(2)   <-----------HVH21    --------->WOX13(1)--------->RAP2.3(1)             --------->ARR11(3) <-------MYC3  --------->CCA1(2) --------->TGA1a     --------->ANAC46             <---------ARR11(3) ------->MYC3  --------->At4g35610    ------>ZmHOX2a(1) <---------ANAC46   --------->ZAT14 ----------->HVH21 <---------SPL7  <---------ATHB12<---------ATERF1(1)--------->LBD16   ttcactacgcttcaagatcaaacgacagctaccacatgtcatacggagagatgaaatcaatctccgacgtcctccgccgctgctctccgccgtgtaatct  26836600                                                                                           <---------At4g35610                                                          --------->SPL7                   --------->At4g35610                               --------->HSFB2a(2)        <---------ZAT14               <---------At4g35610                               <---------HSFB2a(2)      <---------SPL7                 --------->ANAC46                              <---------LBD16          <---------ANAC58               --------->ZAT14                  --------->ANAC58                     <---------ANAC58               <---------ZAT14                  --------->ANAC58                     <---------ANAC46          <---------MYB52(1)                  --------->ANAC55(1)            --------->MYB52(1)            ----------->GT1                  --------->ANAC46            --------->AtMYB61              --------->GLK1(2)                --------->ANAC46   <---------GLK1(1)------->GAMYB           <---------GLK1(2)   cttagtcttcggtcttacacacgaaacccttctctggaaatcgctaaaccacaacgggcgtacagttttcatcgaagagaatcgttactacgctgcttac  26836700  Previous    Next  AGI:  At5g67210.1    Description:  nucleic acid binding / pancreatic ribonuclease. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71903.1); contains InterPro domain Protein of unknown function DUF579, plant (InterPro:IPR006514) Range:  from: 26836175    to: 26837383    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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