Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------------AtSPL3                                                                               <---------------AtSPL8                                                                               --------------->AtSPL3                               <---------YAB1                        <-------GAMYB                              <---------ARR11(3)                    <---------ANAC46     --------->YAB1                              <<<<<<<<<<GT-1                     <----------DOF2 <---------SPL7  ----    <----------DOF2    <---------YAB1          ----------->GT1<---------ARR11(3) --------->TOE1(2) >YAB1            <---------TOE2(3)       ---------->DOF2  <---------DAG2<---------TOE2(3)  <-------- -AtLEC2         ---------->DOF2 --------->TOE2(3)         <----------DOF2<---------REM1(1)--------->ICU4   cttaatcttttttttttgttaaagtatgactatatcattaacaaaaaagaagaaaaaatgactttatctttcgttgatgtagacgtacgagtaataatgt  26816600                     --------->DAG2                 --------->AHL20(2)                 --------->YAB1     --------->AHL20(2)                                                   --------->YAB1     <---------AHL20(2)                                               <---------YAB1     <---------AHL20(1)                                               --------->ICU4     --------->AHL20(1)                --------->ZAT14              <---------ICU4 <---------TOE1(3)    <---------ATHB12---------->DOF2    <---------ZAT14              <--------HAHB4 <---------TOE2(3)-    --------->AHL20(2)                <---------ZAT6                --------->YAB1---------->DOF2 <-- --->TEIL  <-----------GT1          <---------ANAC46               <------ZmHOX2a(2)----------->GT1<- -ICU4   --------->AHL20(2)  <----------DOF2                <-------TEIL <---------YAB1        <-----   atgtcaataaatttaacaattataaagcagtctttatttagtgtagaatacgaacagagcgatacatggatcattatcaaagtttaaagttaaactggtg  26816700           --------->DOF5.7(2)           <---------MYB52(1)                        <---------AHL20(2)       <---------At5g28300                           --------->AHL20(2)       -------->P                                --------->AHL20(2)                      ----------->GT1   ------>MYB83                                  --------->YAB1                  --------->TOE2(3) --   ------>MYB46(1)                              <---------YAB1                 <---------AHL20(2)  <- <---------MYB59      --------->TOE2(3)       --------->YAB1               <---------AHL20(2)     <-- -------->DEAR3(2)  --------->ARR11(3)       --------------->AGL15         --------->AHL20(2)   ----- ---------GT1       <---------ARR11(3) <---------AHL20(2)                 <---------AHL20(2)   <----- --------At5g28300 <---------CCA1(2)  <---------AHL20(1)                  --------->ICU4----------->GT1 ----ZAT6 <-------GAMYB               --------->AHL20(1)           ----------->GT1    ---------->DOF2   ttaccgacttaccgttaccatatatctcaatacatggatatatatttcttataatataaatagataagtgtgtgaaattattttcttaaaaagataaata  26816800                                                       <---------TOE1(2)                                          <---------ANAC58                                          <---------ANAC55(2)      <---------ZAT14                     --------->ANAC55(2)      --------->ZAT14                     <---------ANAC46  <---------ICU4                          <---------ANAC55(1)                         <---------ANAC46 ------->YAB1                             <---------ANAC58                          <---------ANAC46 --------ICU4                           <-----------GT1<---------TOE2(2) --------->AHL20(2) -------YAB1   <---------YAB1        <---------ANAC55(2)                 <---------AHL20(2) ---->YAB1  <---------YAB1           --------->ANAC55(2)        --------->YAB1     <---------MYB52(1) ----AHL20(2)--------->YAB1   <---------TOE2(3)     --------->ATHB12  <----------DOF2 ----------->GT1   atcataactacagtattataaatacacaaattaagaaatatgtaacgtgtttaatccttggtttgatcagaacttttaattatccgatgtgtataaattt  26816900                                                                                             --------                                                                                           ------>NtERF2                                                                                          <---------DEAR3(1)                                                                                          --------->DEAR3(1)                                                                                         --------->ATERF1(1)                                                                                         --------->RAP2.3(1)                                                                                         <------NtERF2                                                                                        <---------RRTF1(1)                                                                                        <---------ERF1                                                                                        <---------DEAR4(2)                                                                                        <---------ORA47(2)                                                                                        ------>NtERF2                                                                                        <---------ATERF1(1)                                                                                        <---------RAP2.3(1)                                                                                        <---------RAP2.6(1)                                                                                       <---------RAP2.3(2)                                                                                       --------->ATERF1(2)                                                                                       <---------DEAR3(1)                                                                                       --------->DEAR3(1)                                                                                       <---------ATERF1(2)                                                                                       <---------RAP2.3(3)                                                                                      --------->ATERF1(1)                                                                                      <---------ABI4(1)                                                                                      <---------LBD16                                                                                     <---------RAP2.3(1)                                                                                    <---------DEAR3(1)                                                                                   <-------TEIL                                                                                  --------->CCA1(2)                                                                                  --------->GLK1(2)                                                                                  --------->ARR14(1)                                                                                 <---------GLK1(2)                                                                                 --------->ARR11(1)                                                    <---------ANAC46             <---------ARR14(2)                                                    <---------ANAC58             --------->ARR14(2)                                                   <---------------AtSPL8       <---------GLK1(1)                                                   --------------->AtSPL3       --------->HSFB2a(1)                                               --------->YAB1                   <---------HSFB2a(1)                                    <---------ATHB12<---------ANAC58           ----------->ARR10-----                               ----------------->AGL1                        --------->LBD16 --------                               <-----------------AGL1<---------SPL7         <---------ANAC46*TSS<----                             <----------ID1    <---------ICU4              <---------LBD16-----------                         --------->ATHB12     <---------ATHB51            --------->MYB52(1)<------NtERF2                      <---------ANAC58        <---------ATHB12<---------MYB46(3)--------->GLK1(1) ---                      <---------ANAC58    ------------>CBF   <--------P   ------->TEIL<---------At4g35610   tgaagaagggcctatagttttgtttcttgatgggccaaatcaggcccaataatgtcgtacatggttgttcttcatgtaccggagattcggcggcgacgaa  26817000                       -------->P                       --------->MYB52(1)                      ------->GAMYB                     <---------MYB55(2)                     <---------MYB111(2)                 <------NtERF2                 ------>NtERF2                 --------->LBD16                --------->RAP2.3(3)                --------->RAP2.3(2)                --------->RRTF1(2)                --------->DEAR3(1)                --------->RRTF1(3)                --------->ANAC58                --------->ANAC58                --------->RAP2.6(2)               --------->ERF1               --------->RAP2.3(1)               --------->RRTF1(1)               <------NtERF2               --------->ATERF1(1)              ------>NtERF2             --------->ATERF1(2)             <---------ATERF1(2)             --------->RAP2.3(2)             --------->RRTF1(3)             --------->RAP2.3(3)             --------->RRTF1(2)             <---------ALFIN1             --------->DEAR3(1)             <---------DEAR3(1)            --------->RAP2.6(1)            --------->ORA47(2)            --------->RAP2.3(1)            --------->ERF1<---------ETT(1)            --------->RRTF1(1)            --------->DEAR3(2)            --------->DEAR4(2)            <------NtERF2 --------->ANAC46            --------->ATERF1(1)           <---------RRTF1(1)           <---------RAP2.3(1)     --------->ATHB12<---------MYB46(2)                <---------ANAC46     <---------ICU4  --------->MYB46(3)                <---------ANAC58    ------>ZmHOX2a(1)<---------MYB52(2)     <---------ANAC58    <---------YAB1   <---------MYB111(1)    <---------ANAC46 <---------At4g35610 ->ANAC58  <---------ATERF1(1)           <----------DOF2    <---------ARR14(2) ---->ARR14(2)<---------ATERF1(1)       <---------ANAC58    ------->TEIL ->ANAC58  ------>NtERF2 --------->MYB46(3) <---------ANAC58--------->ARR14(2)              ------->GAMYB -----ARR14(2)--------->ABI4(1)--------->ANAC58        <---------ANAC58                  --------->MYB52(1) >HVH21   <---------RAP2.3(2)  --------->ANAC58  <-----------GT1        <---------ICU4   ----------->RAV1(1) ------>DEAR3(2)--------->ANAC46        <---------ANAC58   <---------CCA1(2) <---------ANAC46  ------   accgtcctcattgcgccgccgcaactacccgacaaacaactagctttcgtattacttccttgtatctgatttgataatggcgaaaactaaacaacagaaa  26817100                     <-----------RAV1(2)                ------->GAMYB                            <---------YAB1                --------->RAP2.6(2)          --------->TOE2(3)                                   <---              -------->P            <---------GLK1(2) <---------YAB1----------------->AG         <---             --------->MYB52(1)   --------->ICU4   <---------ARR11(3)          <---------YAB1    <--- --->GLK1(1)--------->MYB46(3)    <---------YAB1   --------->AHL20(1)    <---------ATHB12 <---------YAB1   tctaagcctaagaaacaaccgcatcaggttttcttcatgattctcaacttcaatatatgatttttgtattcccaaatcagtctgattcgattagtattgg  26817200                                         --------->ATHB12                                       <--------P---------->DOF2                                   --                                       <---------WOX13(1)                                        ----                                  <---------ANAC58                                    <---------ANAC58                                  <-----------RAV1(1)            <------ZmHOX2a(1)    <---------ANAC58                     ----------->GT1  <-------GAMYB              ================HOX2a_HOX2a  -------            ----------->GT1       <---------ANAC46           ---------->DOF2          <---------ANAC46         <---------ANAC46         <---------ANAC58        --------->ANAC58           <--------------- ------ANAC46    --------->AHL20(1)  <---------MYB46(3)   --------->ANAC58------>ZmHOX2a(2)   ------- ------ANAC58    --------->ARR11(3)  ----------->GT1  --------->ANAC58  <---------ARR11(3)    <------ ------ANAC58    <---------AHL20(1) <---------AtMYB61 --------->ANAC58  --------->ARR11(3)    <------   cctgttttgctctgtggaaaatattgtaatttgtttgtgtggttgatttgaaaaagaagcaaggaaaggattgtgatctctctcaatttcgtgctcagct  26817300                                  --------->MYB52(1)                                 ----------->HVH21   <----------DOF2             --------->ZAT2 -------->ID1             ----------->HVH21                                    --------->ARR14(2) ------->HVH21          --------->ANAC46                           <----------DOF2 -->ZAT2        <---------GLK1(2)----------->TGA1                 <---------ANAC58 --------TaNAC69(2)     --------->O2  --------->At5g28300         <---------ANAC58 -->At4g35610 <---------TOE1(3)<---------At4g35610           <----------DOF2   <---------ARR14(2) ---At4g35610 <---------YAB1   <---------ZAT2         <---------MYB52(1)<---------YAB1 ---ZAT2      <---------TOE2(3)--------->At4g35610 <-----------RAV1(2)--------->YAB1   tgacgctttagggcttaagattatccaagtgactgctgacggtaattgtttcttcaggtatgtcttttgctttgatcatcgaattcgatttgttttttga  26817400                                                                                                    -                                                                                                   <-                                                                        <---------TOE2(3)          --                                                                       --------->YAB1        --------            <---------ZAT6                                            <---------ATHB12      <--------          --------->YAB1            <-----------HVH21                 --------->ICU4        ---------         <---------ATHB12          <----------DOF2               --------->ANAC58      --------->ANAC58    --------->ANAC58         <---------GLK1(2)                   --------->ANAC58      --------->ANAC58    --------->ANAC58     ----------->GT1                    --------->YAB1<------ZmHOX2a(1) ---------  ---------->DOF2        --------->YAB1                  --------->WOX13(1)           <--------------   agaacaaagcaatcgtgttagattgaatagtgattctctttcacagagcaattgctgatcaattagaaggcaatgaggatgaacacaacaagtaccgtaa  26817500  Previous    Next  AGI:  At5g67170.1    Description:  SEC-C motif-containing protein / OTU-like cysteine protease family protein. similar to OTU-like cysteine protease family protein [Arabidopsis thaliana] (TAIR:AT2G27350.4); similar to OTU-like cysteine protease family protein [Arabidopsis thaliana] (TAIR:AT2G27350.3); similar to OTU-like cysteine protease family protein [Arabidopsis thaliana] (TAIR:AT2G27350.5); similar to hypothetical protein [Vitis vinifera] (GB:CAN65606.1); contains InterPro domain SEC-C motif (InterPro:IPR004027); contains InterPro domain Ovarian tumour, otubain (InterPro:IPR003323) Range:  from: 26816992    to: 26819293    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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