Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------DOF5.7(2)         <-----------GT1         --------->MYB52(1)       <---------MYB52(2)  --------->ANAC58                                  <------NtERF2  --------->ANAC58              --------->At4g35610 ----------->GT1  --------->ANAC46              <---------ZAT2     --------->LBD16 ----ANAC58                     --------->ZAT2    <---------LBD16 ----ANAC55(2)            <-----------HVH21       --------->LBD16 ----ANAC58           --------->GLK1(2)          <---------LBD16 ----ANAC46          <---------GLK1(2)  --------->ZAT6                   <---------LBD16          <-- -->MYB52(2)      --------->LBD16    ------>ZmHOX2a(1)    --------->MYB52(1)        <---------YAB1--- -MYB52(1) --------->MYB46(3)   <---------At4g35610------>NtERF2     <---------ARR11(3)       <------   tgaaacgcaattaacgactccgagattccttcacagctcctaacaccattcgccgggaaaaaacgattcaagaactcagggacattactatcaacaggtt  26814100                                                  =================================bZIP_DOF                                 <---------ANAC58 <---------TGA1a                --------->MYB52(1) --------->ALFIN1             --------->ANAC46    <---------ANAC58 --------->At4g35610               <---------ARR14(2)             ------->GAMYB       <---------ANAC46 <---------At4g35610              <---------SPL7             ===============================================MYC_MYB              <------NtERF2           -------->P     --------->At4g35610     --------->TGA1a               ------>NtERF2          --------->MYB52(1)----------->HVH21     ----------->RAV1(2)          <---------DEAR3(1)        <---------MYB52(2)<---------At4g35610     <---------O2                 --------->DEAR3(1) -------HSFB2a(2)    --------->ARR14(2)           --------->O2          ---------->DOF2    <---------ARR11(3) ------>HSFB2a(2)    <---------ARR14(2)   ------->TEIL      --------->YAB1     --------->ANAC46 ---GLK1(2)=================================================MYC_MYB  --------->ANAC46     <---------GLK1(2)   ctaaaacatcactaaccgaaacggatttagctgaagcgtggatgaatttgacacctgagccatcacaatcgacgtaaaacgacgccgttccagcatcttc  26814200                                                ----------->RAV1(1)                            <-----                                               <----------ID1                                --------                                               ----------->HVH21                             <-------                                           ---------->DOF2                                   <-------                                       ------>ZmHOX2a(2)                                   --------->LBD16                                      <------ZmHOX2a(2)                                   <---------ANAC58                                     --------->ARR14(3)                                   <---------ANAC58                                     <---------ARR14(3)                                  <---------LBD16                                     <---------ARR11(3)                               --------->GLK1(1)                                     <---------ARR14(2)             <---------At4g35610<---------ARR14(2)                                     --------->ARR11(3)             --------->At4g35610--------->ARR14(2) --------->HSFB2a(2)                 --------->ARR14(2)      --------->ATHB12         <---------GLK1(1) <---------HSFB2a(2)               ----------->ARR10      <---------At4g35610 --------->AHL20(2)   <-   gttctcgaccttgacaagacgaccagcgaatgggtagaagatcttcaaagcgacagagagagatgatttcaactgagagattatatgggtttccgggtcg  26814300                                                                                  ===============HOX2a_HOX2a                                                                                  ------>ZmHOX2a(2)                                                                          <-----------GT1                                                                       ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)   ==========================HOX2a_HOX2a                                                  --------->ARR11(3) <---------AGP1   <---------ARR14(2)                                                  <---------ARR11(3) --------->ARR14(2)     ---------->DOF2                ------>ZmHOX2a(2)                <---------ARR14(2)    <------ZmHOX2a(1)         <---------------------WRI1        --------->At4g35610   --------->ARR14(2)  <---------TOE2(3)         --------->ARR14(2)   --------->GLK1(1)   <---------ARR11(3)       <------ ----ANAC46                 <---------ARR14(2)   <---------GLK1(1)   ------->TEIL================HOX2a_HOX2a ->ARR14(2)            <---------ANAC46  ---------->DOF2   <---------ANAC46      <------ZmHOX2a(2) --ARR14(2)        <----------DOF2 <------ZmHOX2a(2)       <---------ANAC58     --------->ARR14(2)--- ----HVH21    <---------ARR11(3)  --------->ARR14(2)       <---------ANAC58     <---------ARR14(2)<-- -------P     --------->ARR11(3)  <---------ARR14(2)------>ZmHOX2a(2)--------->ARR11(3)   ------>ZmHOX2a(1)   ggttgaggaaagagaagacctctttgtgggtattcggatcgaagaaagaagagatcccatggagtgagatggatcttaacccgatccgattcctcgttgt  26814400                                         --------->At4g35610                               <---------ZAT14                                         <---------At4g35610                               <---------ZAT18                                         ----------->RAV1(2)                        <-----------GT1                            --------->ZAT6                                     <---------AHL20(2) ---REM1(1)                <------ZmHOX2a(2)                              <---------YAB1   --------->ZAT14 ------>At4g35610         --------->ARR11(3)              --------->HSFB2a(2) --------->AHL20(2) -------At4g35610         <---------ARR11(3)         <----------DOF2      ----------->GT1  --------->ZAT18   agctctctggtcgaacaatgctcttagagatcactactacttcatctgccattttcttttctcgagtagatagatgctgataaaattcactagtccacta  26814500          <---------AHL20(2)      <---------------AGL15                    --------->ZAT18      ----------->GT1             --------------->AGL15                    <---------ZAT18    <---------ANAC58             <-----------------AGL2                    <---------ZAT14    <---------ANAC58             <-----------------AGL1             ------>MYB46(1)    <---------ANAC46           <-----------GT1                      ------>MYB83  --------->ZAT14      <----------DOF2                            <---------MYB46(2) <-------MYC3   -  --------->ZAT18   <---------ARR11(3)*TSS                        <---------MYB59    ------->MYC3   <  <---------ZAT14<----------DOF2 <-----------------AGL3   ----------->HVH21--------->ZAT14         <-   ctagtggagtgtataatttctttatctttatattttctgtttttggaatcaaattcagacatgacataccaaactagtgaactacaacgtgtttcatgtt  26814600        <-----------TBP     ----------->GT1                                                                             ----     <------MYB83                         <---------STY1(1)                                <---------ZAT2     <------MYB46(1)                      --------->STY1(1)                                --------->ZAT2 -------->AHL20(2)         <------------CBF                 ------>MYB46(1)          <-----------GT1 ---------AHL20(2)       --------->AHL20(2)                 ------>MYB83         <---------AHL20(2) --------AHL20(2)        <---------AHL20(2)             ------->TEIL             --------->AHL20(2)   atttatttggttatatagttaagcccattaattgtccctagcccctaggcccattatcaacctatcgtcgaagtttgatggaattttttacagagctcga  26814700                                             --------->ANAC55(2)                                             --------->ANAC58                                             --------->ANAC58                                             ----------->GT1                                             <---------ANAC55(2)                                          <---------MYB52(1)                                        <---------TOE1(3)                  <------NtERF2         <---------------AtSPL8                <---------DEAR3(1)      <---------------AtSPL3               --------->At4g35610     <-----------RAV1(2)               <---------At4g35610   <---------MYB52(1)               --------->ZAT2        <-----------HVH21                                           <---               <---------ZAT2      <---------ANAC46                                            <-----             <-----------RAV1(2)   <---------ANAC58                                       --------->ARR14(2)           ------->GAMYB        <---------ARR14(2)                                        ------->TEIL         -------->P<---------ANAC46<---------ANAC58    --------->AHL20(2)                 <---------ARR14(2)  --------->HSFB2a(1)           ------------------>SPL14        --------->GLK1(2)         <---------ARR11(1)  =======================RAV    --------->GLK1(2)      <---------AHL20(2)                 --------->GLK1(2)  <-----------RAV1(1)           --------->ARR14(2) --------------->AGL15                 <---------ARR14(1)  <---------HSFB2a(1)     <---------ARR14(2)<-------TEIL       <---------GLK1(2)    <-----------GT1 ----->ANAC46---------->CDC5----------------->AGL1 <---------------AGL15  <-------TEIL   <---------GLK1(2)   cggaatgttgcaaccccagcggcgagtgtttccgattccgttcaggtacgttactatatatataagaatctctaaattcgttgaattatccgaatctgtt  26814800                           ---------->DOF2                         --------->ANAC58                         --------->ANAC58                         --------->ANAC46                     ------>MYB83                                                             <------                     ------>MYB46(1)                    <---------AHL20(2)                 ----------                   <---------MYB59                     <---------AHL20(2)               <---------ANAC58            <---------ANAC46                           --------->AHL20(2)               <---------ANAC58 ------MYB46(3)   --------->DEAR3(2)           --------->ATHB51                    --------->ALFIN1 ----MYB52(1)    ------->TEIL                 <---------YAB1                      <---------MYB46(3)<   tgttcatggtgatgttgtgaaccgaacacgaaagaattgcataggcttattattgtattaatttgaaaaacgagagagaattggtgtttggcttagttaa  26814900                                           --------->TOE2(3)                                          ----------->GT1              <-----------GT1        -------                                       --------->ARR14(2)             <-----------GT1         -------                                       <---------ARR14(2)           <---------ICU4       --------->ZAT14                                <---------ANAC58            --------->WRKY45          ----------->GT1 ---AHL20(2)     <---------ATHB12   --------->ANAC55(2)   <----------DOF2     ----------->RAV1(2) ->GT1         ------>MYB83     <---------ANAC58       <---------ARR11(3)    --------->MYB52(1) -----------GT1------>MYB46(1) <---------ICU4        <---------At4g35610 --------->ZAT6--------->At5g28300   attcacattgctaaaccaaatcatctcatacaatgcttacatattcgttaaattcagcatctttgactaatttttccactacctgaggcagtaaacaagc  26815000  Previous    Next  AGI:  At5g67150.1    Description:  transferase family protein. similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT3G50280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71884.1); contains InterPro domain Transferase (InterPro:IPR003480) Range:  from: 26812997    to: 26814538    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g67160.1    Description:  transferase family protein. similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G67150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71884.1); contains InterPro domain Transferase (InterPro:IPR003480) Range:  from: 26814839    to: 26816267    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version