Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <------MYB83                                                                              <------MYB46(1)                                                                             --------->MYB59            ----------->GT1                                                >>>>>>>>>SARD1    <---------AHL20(2)                      <---------YAB1                 >>>>>>>>>CBP60g   --------->AHL20(2)                     <---------AHL20(2)            <---------ARR11(3)   <---------AHL20(2)                     --------->AHL20(2)          --------->ANAC58 --------->TOE2(3)                       <---------AHL20(2)           --------->ANAC46 --------YAB1                          <---------ICU4                 --------->ANAC58 --->ARR11(3)                         --------->ICU4          --------->GLK1(2) ----ARR11(3)        ---------->DOF2--------->AHL20(2)        --------->ARR11(3)          <---------ICU4 ---GT1 --------->YAB1              --------->YAB1            <---------ARR11(3)          --------->ATHB51   cttcattaaatgatcagtaatttcaaagcattaaacaataaaaattatttttcacttaaaacaaaatcttacaagaaatttggtctatagaataatttca  26784800                                                       <------MYB46(1)                                                      <---------AtMYB61                                                    --------->ARR14(2)                                   <---------ANAC46--------->ATHB12                                <----------DOF2    <------ZmHOX2a(1)                               <---------ANAC58  <---------TOE1(2)                   <---------At4g35610          <-----------RAV1(2)                   ----------->RAV1(2)  <-----------GT1<------MYB83                      <----------DOF2          <---------AHL20(2)   <---------ANAC58 <---------LBD16  <---------YAB1 --------->ICU4         --------->AHL20(2)<----------DOF2 ------->GAMYB   <----------DOF2 --------->ANAC46  <-------   ttaagatgctattaaatattcaactgggcctttgcttttgtgtaacagtctcaggattggtctttttctcattgtttacacaattagtagtcttttatgt  26784900                                           <-----------ARR10                                           --------->GLK1(2)                                           --------->ARR14(2)                                           <---------ARR14(2)                                           <---------ARR11(1)                                           ------->TEIL                                          <---------ARR14(1)                                          <---------GLK1(2)           --------->YAB1        <---------AHL20(2)                <---------CCA1(2)      --------->STY1(2)        <---------YAB1             --------->MYB46(3)           ------>MYB83  --------->At4g35610       ----------->RAV1(2)                 ------>MYB46(1)        <---------REM1(1) --TOE2(3)      <------ZmHOX2a(1)--------->PCF2         --------->ANAC46 ---------->DOF2         ----   tatcagctatattattcaggacccaaaaacaactggacccatccgaatctttttaaaaacacaacctagctatcacaaaggctgttttgatgaagcccaa  26785000                                                                                           --------->YAB1                                  ----------->RAV1(2)                                      <---------ICU4                              ---------->DOF2                                              <--------HAHB4                             ------->GAMYB                                                 --------->ATHB12                            --------->ANAC58                                              <---------ATHB12     -------->P             --------->ANAC58                                             ------>MYB46(1)     ------>MYB83          ------>MYB46(1)                                               ------>MYB83     ------>MYB46(1)       ------>MYB83                                                 --------->WOX13(1)   <---------MYB59        --------->MYB52(1)                        --------->MYB46(3)--------->MYB46(3) --------->ARR11(3)      --------->TOE1(2)                    --------->ANAC58       --------->ANAC58 <---------ARR11(3)      --------->TOE2(2)                    --------->ANAC58       --------->ANAC58 ------>DOF2            --------->MYB46(3)                 <---------ATHB12        --------->MYB46(3)   aaagacctactcgtataccaaaaaaaaccaacgaaagcctggcccattaatctctcatcaaatcaggccaacaatccaagggctcacaaccaatcatttc  26785100                                           --------->ZAT6                       <---------ALFIN1<-----------HVH21                                       ------                    --------->PCF2 --------->YAB1                                              <-----                   <-----------HVH21   <-----------TGA1                                        <-----             <---------ALFIN1 --------->ZAT14                                          <---------HSFB2a(2)             --------->REM1(1)<------ZmHOX2a(2)      --------->ANAC58           ---------->DOF2<-----           ==========================HOX2a_HOX2a     --------->ANAC46       <----------ID1 <---------           ------>ZmHOX2a(1) <---------ARR11(3)      --------->ANAC58    ---------->DOF2  <------ZmHOX2a(1)   cacttctcttatcctacaccgtgtcccaccagatcactcatcgtcacactaacacactcaccaaaaaaaaaactcaaaagcacaaagctcgaggaggtcc  26785200           <---------AHL20(2)           --------->AHL20(2)             --------->At5g28300     <---------ANAC46       <---------ARR11(3)                                            <---------- ----------->AGL3           --------->ARR11(3)                                         <------------- ------------AGL2          <---------GLK1(2)          --------->MYB46(3)         <-----------GT1 ------------AGL3      --------->LBD16   ----------->GT1     <----------DOF2  <---------ICU4 --TEIL   --------->AHL20(2)--------->GLK1(2)         <---------ATHB12       ------>ZmHOX2a(1)      < ------AtSPL8  --------->YAB1--------->RVE1(1)*TSS  --------->WOX13(1)      --------->TOE2(3)      <-   ataaatggcgcatttaattagaacccccaaaatctcttcacaactgtaaaaccccaatcacctctttacatgtgacttccttattactctcttcttctta  26785300                                                <---------At4g35610                                                <------NtERF2                                                --------->HSFC1(2)                                                --------->HSFB2a(1)                                                --------->ZAT2            <<<<<<<<<TBF1                       <---------HSFB2a(1)      ------>ZmHOX2a(1)                         --------->At4g35610   ------>ZmHOX2a(1)                  ------->GAMYB --------------ANAC81             --------->MYB46(3)  <---------CCA1(2) -----------ANAC81              ----------->RAV1(1)<-------TEIL -----------GT1               --------->LBD16   <---------ZAT2        ------>ZmHOX2a(1) ----------GT1               --------->ANAC46   <---------HSFC1(2) ------>ZmHOX2a(1)     <----------DOF2   ttttcctcctcttcttcttcgctctagtttcccccaacaatcgccatggcagcttcgtctctcaatctcctcctcattctctctcttctcactttcattt  26785400             ------->TEIL            <---------GLK1(2)         ------>ZmHOX2a(2)        --------->CCA1(2)        <------ZmHOX2a(2)        --------->At4g35610                            --------->ARR14(2)       <---------ARR14(2)                              <---------ARR14(2)       <---------ARR11(3)                              <---------GLK1(2)       <---------AGP1                             --------->MYB52(1)       --------->AGP1                            ----------->HVH21       --------->ARR11(3)                       --------->MYB46(3)              --------->At4g35610       --------->ARR14(2)       <---------CCA1(2)--------->ANAC46     ------>ZmHOX2a(2)      --------->GLK1(1)    --------->GLK1(2)    <---------MYB55(2)   <------ZmHOX2a(2)              <      <---------GLK1(1) <---------MYB52(1)     --------->ANAC46     --------->ARR14(2)       <-------   --------->LBD16<----------DOF2             -------->P            <---------ARR14(2)      <--------   ctctccagagatctgaatctctttccgataatccatctctcactcttctacccgacggattcgactggccgatctctcactccgatgaattcgatatcat  26785500                                                <------ZmHOX2a(2)                                                ===============================HOX2a_HOX2a                                               --------->AGP1                                               --------->ARR14(2)                            ===========================HOX2a_HOX2a      <------ZmHOX2a(1)                            <------ZmHOX2a(1)  <---------ARR14(2)    <------NtERF2                       <---------ANAC55(2)--------->MYB52(1)         --------->ATERF1(1)         <---                      <---------LBD16------>NtERF2                  --------->LBD16              <---                    --------->ARR14(2)   ----------->HVH21         <---------ANAC58         ---------           <---------HSFC1(2)       <---------DEAR3(1)             <---------ANAC58       <---------SPL7           <---------HSFB2a(1)     --------->ATERF1(1)             <---------ANAC46      <---------ANAC58  --------->At5g28300--------->MYB52(1)<---------ANAC58           <---------LBD16        <---------ANAC58 ---------DEAR3(1)  <---------ARR14(2)<------NtERF2         <---------ZAT14         <---------ANAC55(2) --YAB1 ---------->DOF2<---------ANAC46<---------ANAC58     --------->ZAT14         --------->ANAC55(2) -ARR11(3) --------->HSFC1(2)     <---------ATERF1(1) --------->At5g28300         <-----------GT1----   cgacggtgaagaaagcttcgaagttacggaggaagacgacggcgtaacagatcgacggtcattgtactggcggaggacgaagtattacatatcgtacggt  26785600                                          <---------------AtSPL3                                          --------------->AtSPL8                                          --------------->AtSPL3                                          <------ZmHOX2a(2)                                         <---------ARR14(2)                                         <---------ARR11(3)                                         --------->ARR11(3)                                   --------->HSFB2a(2)                                   <---------HSFB2a(2)                                  ------>ZmHOX2a(2)                                 --------->CCA1(2)                                 <------ZmHOX2a(2)                                <---------ARR14(2)                                --------->AGP1                                <---------AGP1--------->SPL7                                --------->ARR14(2)                                <---------ARR14(3)                                --------->ARR14(3)                             <---------------AGL15                             <---------HSFB2a(2) <---------ZAT14                             --------->HSFB2a(2) --------->ZAT14                             --------------->AGL15                            <-----------------AGL2     <---------RAP2.3(1)    ----------------->AGL1    <---------RAP2.3(3)     <-----------------AGL1    --------->ETT(1)        ----------------->AGL2    <---------DEAR3(1)    ========================HOX2a_HOX2a    <---------DEAR4(1)    ------>ZmHOX2a(1)------>ZmHOX2a(2)    <---------DREB2C(2)   ==============HOX2a_HOX2a    <---------At1g77200   =======================HOX2a_HOX2a  <-----------HVH21       ===============HOX2a_HOX2a     <---------ICU4                    ---------- ------ZAT14     --------->ZAT18--------->ARR11(3)       --------->ARR14(2)              --------->LBD16 ----TEIL     <---------ANAC58  <---------ARR11(3)    --------->YAB1         --------->PCF5--------->ARR14(2) >SPL7<------NtERF2  --------->bZIP60(2) --------->ARR14(2)    <-----------HVH21   <-------TEIL ----- ----->ZAT14  <---------ANAC58 <---------CCA1(2) <---------ZAT18    --------->AGP1<---------MYB52(1)   gcattgtcggcgaatagagtgccatgtcctcccagatctggaagatcgtactacactcataactgcttcagagctagaggtcccgttcatccgtatagcc  26785700  Previous    Next  AGI:  At5g67070.1    Description:  RALFL34 (RALF-LIKE 34). similar to RALFL33 (RALF-LIKE 33) [Arabidopsis thaliana] (TAIR:AT4G15800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71860.1); contains InterPro domain Rapid ALkalinization Factor (InterPro:IPR008801) Range:  from: 26785246    to: 26786072    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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