Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ATHB51                                                       -------->HAHB4                                                       <--------HAHB4                                         --------->ANAC46    --------->HSFB2a(2)                                         --------->ANAC58    <---------HSFB2a(2)                             --------->AHL20(1)        --------->YAB1                             <---------AHL20(1)        <---------ICU4                             --------->AHL20(2)        <--------ATHB1                      --------->GLK1(2)                             --------->ARR11(3)       <---------YAB1          <---------GLK1(2)                             <---------AHL20(2)       --------->ICU4        <---------ARR11(3) ---------DOF2               <---------ARR11(3)       <---------ATHB51      --------->AHL20(1) -----ARR11(3)    --------->At4g35610    --------->ANAC58--------->ICU4     --------->ARR11(3) ---->ARR11(3)<---------GLK1(2)       ------->GAMYB --------->YAB1         <---------AHL20(2) ->DOF2    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----------->GT1        ------->TEIL      <---------GLK1(2)   tcttttgtcaaaacaagattagctaaaccaatatattcaacacacacaaactagtaataattactagaagtatgtatatatattctcaccaagaatctct  26749700                                                                                         <-------GAMYB                                                                                        --------->MYB52(2)                                                                                        --------->MYB111(2)                                                                                        --------->MYB46(2)                                                                                        <---------MYB46(3)                                                                                        --------->MYB111(1)                                                                                    --------->MYB59                                                                                 <----------DOF2                                                                             <----------DOF2                                                                            ------>ZmHOX2a(2)                                                                          <---------ARR11(3)                                                                          --------->ARR14(2)                                                                          --------->ARR14(3)                                                                          <---------ARR14(3)                                                                          <-----------ARR10                                                       ----------->GT1    --------->GLK1(2)                                                     ----------->GT1      <---------ARR14(2)                        --------->ANAC58            --------->DAG2        --------->ARR11(3)               ----------->GT1                     ---------->DOF2       <------ZmHOX2a(1)        ---------->DOF2 --------->ANAC58     --------->AHL20(2)  --------->CCA1(2)  <---------TOE2(3)   <---------ANAC46     ----------->GT1    --------->TOE2(3)---------->DOF2<------ZmHOX2a(2)   gttttaggtgtaaagaagagaaaaacaagaaaattagcatcacaaacttaaataaaagtgaaaaaagaaatgggaggatctttctttaggtagttgtaat  26749800                     --------->ARR11(3)                     <---------ARR11(3)                                                   --------->PCF2                 ---------->DOF2                                                 <----------DOF2          <---------At4g35610                                 ---------->DOF2  --------->HSFC1(2)  --          --------->ZAT2                          --------->At5g28300          <---------HSFC1(2) ---          <---------ZAT2<----------DOF2          ----------->GT1     ---------->DOF2     --------->TCP15(1)          --------->At4g35610            ---------->DOF2---------->DOF2  ---------->DOF2 <---------PCF2   ttgtatagagccagctaaaaaaagagctttcaaaaacaatggagaaagaaacagtaaataaagaaaaagagcaaagaaagaagctttcatgggtcccaaa  26749900                                                                                                -----                                                                                                <----                                                                                     <---------AHL20(2)                                                                                <---------AHL20(2)                                                                                --------->AHL20(2)                                                                        >>>>>>>>>GATA-3      <-------                        --------->YAB1                                  >>>>>>>>>GATA-4     ---------                     --------->GLK1(1)                                  >>>>>>>>>GATA-2    <---------YAB1                     --------->CCA1(2)                                  >>>>>>>>>GATA-1 <---------YAB1                    --------->ARR11(3)                              --------->LBD16  --------->AHL20(1)           --------->YAB1                                          <---------ANAC46  --------->AHL20(2)          --------->MYB46(3)                                  <---------YAB1   <---------AHL20(2)        --------->WOX13(1)                           --------->YAB1<---------ANAC58 <---------AHL20(2) ------->AHL20(2)   <---------ARR11(3)            --------->YAB1   <---------ANAC58 --------->AHL20(2) ------>AHL20(2)---------->DOF2      --------->AHL20(2) <---------TOE2(2)      --------->AHL20(2)   ataaaaaaaacaatcaccaaaagatatcaaaatactgaattaaaaattcaaataatcatatgttatgatgcgtggattgaatttaattttattattaaaa  26750000  <---------AHL20(1)             --------->ICU4                                            <---------  --------->AHL20(1)           ---------->DOF2                                             ----------  --------->ARR11(3)        ------->GAMYB                                                  <--------- ---->YAB1               --------->MYB52(1)     <---------WOX13(1)   ----------->GT1       <---------DAG2 -----ICU4             <---------MYB52(2)      <------------CBF     --------->DAG2        <---------- --AHL20(2)           --------->ANAC58        --------->ATHB12     ---------->DOF2      <-----------GT1 >AHL20(2)            --------->ANAC58--------->MYB59        <----------DOF2        <----------------   atgatatattggaattggaacagcaagtaacagcaaagattaggcacttgattgatatataagcttttaaaaagtcaaatggcattttagtcactttttt  26750100                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                            <---------ANAC46                                                                 <-----------RAV1(1)                                                                 <---------MYB46(3)                                                              <-----------RAV1(1)              <----- -DOF2 ----------->HVH21                         --------->GLK1(2)       <---------MYB52(1)    ------ ----->AGL15                                     --------->ARR14(2)     <-------GAMYB          <----- ------AGL15     <---------YAB1                  <---------ARR14(2)    <-----------RAV1(1)     ------ -------AGL3 <---------GLK1(2)      <---------GLK1(2)      <---------MYB52(1)<----------DOF2   <----- --------ANAC81*TSS        <-----------HVH21    <---------GLK1(2)<---------REM1(1)     ---------->DOF2   tggttttgagggacagattatcaaaccagagtcagagagattatcgctcagaatttgctctgttttgttgttgctgttgctttgatgtgaaaaggagtat  26750200                                                                    <---------DAG2                                                                    <----------DOF2              <---                                                            <----------DOF2                      <--- ------ARR10   <------MYB83                           <---------GLK1(2)                       <------ --->GLK1(2)   <---------ANAC46                       --------->ARR14(2)                      <------ ----ARR11(3)  <------MYB46(1)     --------->HSFC1(2) <---------ARR14(2)                      <------ --->ARR14(2) --------->MYB111(2)  <---------HSFC1(2) --------->ARR11(3)                      <------ ----ARR14(2) --------->MYB46(2)  ------->TEIL        <---------ARR11(3)                  <----------DOF2   ctattttctcttaagtttggtgagacgaagaacatgaagcttctctgtgtttctcagattttcttttgagcttttttttgggatttgagtctctttgctt  26750300                                                                                    ------>ZmHOX2a(2)                                                                                  <---------AGP1                                                                               <---------------AGL15                                                                               ======================                                                                               ======================                                                                              --------->ANAC55(2)                                                                              <---------ANAC58 ---MYB46(1)                             <---------ARR11(3)                   <-----------------AGL1 ---MYB83                                --------->ARR11(3)                   <---------ANAC58 ---AtLEC2                      <----------DOF2   <---------MYB59           <-----------GT1 ---ANAC58                   <-----------GT1     ----------------->AG  <---------AHL20(2)    <------- ---ANAC46            <---------TOE2(3) <---------GLK1(1)       <----------DOF2--------------->AGL15 ---ANAC58      <----------ID1  <---------DAG2   ==============================================MADS_MADS   ggtttgtctgttcaagatgggacaaaggttttgacttttttgatatctcttaccgaattgttcaagctttgattttttttacttgatctgggatttgatt  26750400                                                                               --------------->AGL15                                                                               <---------------AGL15                                                                              <-----------------AG                                                                              ----------------->AGL2                                                                              <-----------------AGL1                                                                              ----------------->AG                                                                              <-----------------AGL2                                                                              ----------------->AGL3                                                                              ----------------->AGL1                                                                        <---------TOE1(2)                                                                        <---------TOE2(2)                                      <----------DOF2                  --------->LBD16                                 ----------->GT1                      <---------TOE2(1)                  ------>ZmHOX2a(1)   <---------YAB1          <----------DOF2 <-----------------AGL3               ------>ZmHOX2a(1)--------->ALFIN1          <---------GLK1(2)--------->GLK1(1)       --     <-----------GT1         --------->ATHB12           <---------YAB1<---------TOE1(1)     <-------- ==============================================================================================MADS_MADS ===============================================================================================MADS_MADS -----------------ANAC81    <---------ATHB12    <---------LBD16      ------>ZmHOX2a(2)      <--------   tgatttgtttctatttcctccttctccctaatcagtggtgatttttggtttctgggttctgattcttttgatccgaggtttccaaattagggaccttttt  26750500                                                                                              <------                                                                                              <------                                                                          --------->ANAC58    -------                                                             <---------ARR11(3)              <-------                                                             --------->ARR14(2)            --------->At4g35610                                                             <---------ARR14(2)            <---------At4g35610                          --------->ANAC58                   <-----------ARR10            --------->ALFIN1           <---------TOE1(3)                                 --------->ARR11(3)          <---------ZAT14     <---------YAB1       --------->ANAC58                  <---------GLK1(1)            --------->ZAT14 ------->LBD16            <----------ID1        <---------TOE1(3)         --------->ANAC58<---------- --DOF2    <---------TOE2(3)                    <---------TOE2(3)   <----------DOF2<---------At5g28300 -DAG2--------->ATHB12  ---------->DOF2   --------->ICU4    <---------CCA1(2)     <-----------GT1   ccccaatttgattagggtttcagataaaaagccaaactttgggaaaaattagggtttgatgcatatctcactttggaagccaatttaccactgtgctgct  26750600  Previous    Next  AGI:  At5g66950.1    Description:  catalytic/ pyridoxal phosphate binding. similar to catalytic/ pyridoxal phosphate binding [Arabidopsis thaliana] (TAIR:AT2G23520.1); similar to catalytic/ pyridoxal phosphate binding [Arabidopsis thaliana] (TAIR:AT4G37100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46580.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75833.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45321.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015421) Range:  from: 26750115    to: 26753372    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version