Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <------------AtMYB77                                                                               <------------MYB.PH3(1)                                                                          --------->YAB1                                                                         <---------YAB1                                                                         <---------TOE1(3)      -----                                                                         <---------TOE2(3)    <------                                  ---------->ID1                   <----------DOF2--------->DOF5.7(2)                              <---------DAG2                       <---------DAG2 <---------MYB52(1)      <---------ANAC58        <----------DOF2                      <---------------AGL15    <--------      <---------ANAC58     <-----------GT1                         --------------->AGL15    ---------   <----------DOF2     <----------DOF2            <-----------GT1 <-----------------AGL3   --------->ICU4 --------------------ANAC81---------->ID1    <---------ZAT6       <-----------------AGL2--------->LBD16   tttgtctttcgttcaatttctgactctttttcctttttcgttttctagttttaaactatttccatttagctttttatggtaaccgttatccgaataatga  26739600                         --------->YAB1       <-----------GT1                      <---------ICU4     <---------ANAC55(2)                      --------->YAB1     ----------->GT1                     --------->ICU4      >>>>>>>>CAMTA3 ----->DOF2     --------->ANAC58         <---------ANAC46 ---YAB1        --------->ANAC58        <-----------------------TaNAC69(2)            <---------DAG2 -ICU4     <---------ANAC46       --------->AtMYB61               <---------At5g28300 <----------DOF2 >YAB1<----------DOF2<---------ATHB12---------->DOF2         <---------MYB52(1)    <---------ALFIN1   aagctaagctttggctggaagcaataatcatataaaccaaaacgcgtgaaaccattcaagtccgttctcaccgcattatccactaccactttttctcaca  26739700                                  <---------MYB55(2)                                --------->ANAC46                                ------>MYB46(1)                              <---------MYB59                            -------->P--------->AtMYB61                           --------->WOX13(1)                 <-----------GT1------>MYB83           <---------AHL20(1) ------->GAMYB           --------->AHL20(2) --------->AtMYB61            ------->GAMYB                            -           <---------AHL20(2)--------->MYB46(3)           <---------MYB52(2)              <---------YAB1     <---------DAG2--------->ZAT6 --------->MYB46(3)      --------->MYB46(3)            --------->YAB1     <----------DOF2     <---------ATHB12         <----------DOF2                     <---------WOX13(1)   ttaacaactttattttattttacactaatcaaccaaaccaccaaaacttatacttttacaacaaaccagaccagcattttcaaatgtgaatgataatgga  26739800                         --------->ANAC58                         --------->ANAC58                     <---------RAP2.6(3)                     ------>NtERF2                    <---------ATERF1(2)                    --------->At1g77200                    <---------ETT(2)                    --------->RAP2.6(2)                    --------->ATERF1(2)                       --------->GLK1(2)              <-----------ARR10                             <---------AHL20(2)              ---------              --------->ARR14(2)                           --------->AHL20(2)        ----------->GT1              <---------ARR14(2)                           <---------AHL20(1)      ----------->GT1          <------ZmHOX2a(2)                     ----------->HVH21          --------->ARR11(3)       <   ------->TEIL     <---------ETT(1)    --------->YAB1     --------->AHL20(1)  ---------->DOF2 ------ ---------->GT1   --------->At4g35610  <-------TEIL   --------->AHL20(2)   <---------ARR11(3)<-------   taatgtatatagatcaaatctgccgacaagtatgtataagattcatagttctgacataaaatataatctgtgtttaaaatctaaagggtgtaaatttaaa  26739900                                          >>>>>>>>>>WRKY43                                          >>>>>>>>>>WRKY38                                      <----                                          <-----------GT1                                      <-----                                     <---------YAB1                                        <---------                                    --------->AHL20(1)                                   <---------YAB1                                    <---------AHL20(2)                          <------ZmHOX2a(2)                                    <---------AHL20(1)                         --------->AGP1 -------                                   --------->AHL20(2)                          <---------ARR14(2)                                  <---------YAB1             <---------AHL20(1)<---------ARR11(3)                                --------->YAB1          ------------>CBF       --------->ARR14(2)                             <---------ICU4    ------>MYB83  --------->AHL20(2)--------->ARR14(3) >AHL20(2)                   --------->YAB1    ------>MYB46(1)     --------->DAG2       <-----------HVH21 ---------MYB46(3)          --------->ICU4>>>>>>>>>>WRKY26   <---------AHL20(2)--------->ARR11(3) ---->DOF2      <---------YAB1 <---------YAB1--------->AtMYB61    ---------->DOF2------>ZmHOX2a(2) --AHL20(2) <---------WOX13(1) --------->ICU4<---------MYB59 --------->AHL20(1)<---------ARR14(3)   agttgttgaagttgatttatgagagagttgattatgattatatttgaccaaacccaaaaacaataaaataaagtcactcgagatcttcactgtcattgat  26740000      <---------DAG2                                     <----------DOF2   <---------ALFIN1                                --------->ANAC46  --------->MYB46(3)                              --------->MYB46(3)           <---------YAB1 -----WOX13(1)                                   *TSS<---------ALFIN1       <---------DAG2 -------CBF       <----------DOF2            <-----------HVH21              <----------DOF2 ---CBF<----------DOF2   <-----------GT1    <---------bZIP60(1)         --------->ZAT18           --- -->ATHB12        <---------DAG2            --------->bZIP60(1)         <---------ZAT18 ---------->DOF2   tggaaccacctttgggactcctttttttttcttctctcacttacttatgtcacccacaactttcgctatctaattgcactttttatagaccaaagtccct  26740100                                                                                 --------->ANAC58                                                                             --------->ANAC55(2)                                                                             <---------HSFB2a(2)                                                                             --------->ANAC46                                                                             <---------ANAC55(2)                                                                             --------->HSFB2a(2)                                                                             --------->ANAC58                                          --------->ZAT2                     --------->ANAC58                                          <---------At4g35610               <---------LBD16         -                                    <---------ARR11(3)   --------------------->WRI1   --------->AtLEC2                                    --------->ARR11(3)   <----------DOF2 <----------DOF2   xxxxxxxxxx ------>REM1(1)    --------------->AGL15  --------->At4g35610      <---------YAB1--------->ANAC58   -   acattactctattttctcaaaccccatttagaagaagagttcttagctgtcttcaatctctttgtctgtatcattctttacggaagccatgaaaatggca  26740200                                                                 <------MYB83                                                                --------->MYB46(2)                        --------->YAB1                    <---------At4g35610                        <---------ICU4              <----------DOF2        ---------->DOF2                       <---------ATHB12           ===================================================           <---------ARR11(3)                     --------------->AGL15  <---------ZAT6 -------->ANAC58  <---------ANAC58            --------->WRKY38(1)<------MYB46(1) xxxxxxxxxxxxx>smallRNA(si3)    <<<<<<<<<TBF1 --------->WRKY45  --------->MYB111(2) -------->ANAC58  <---------ANAC58          <----------DOF2   <---------MYB52(1)  ---------->DOF2  <-   tcaagaaaaacaacatccttgcttaatcatcttcttcttcttggagctttgactcttttgagcagtttggtgatagtgaaaggagaaagcccttacaagt  26740300                                                                                              <------                                                                                              -------                                                                                             <-------                                                                                            ---------                                                                                           <---------ANAC55(2)                                                                                       <---------HSFB2a(1)                                                                                       --------->HSFC1(2)                                                                                       --------->HSFB2a(1)                                                                                       <---------HSFC1(2)                                                                                  <---------TOE2(3)                                                                            --------------->AGL15                                                                            <---------------AGL15                                                                           <-----------------AGL1                                                          --------->ANAC46 ----------------->AGL1                                                       <-------TEIL        ----------------->AGL3                                              ------>ZmHOX2a(1)            <-----------------AGL3                                             --------->TOE2(3)             ==========================                                             ===============================================MADS_MADS                                             <---------------AGL15         ----------------->AG          ----------->GT1                   ----------------->AGL1         <-----------------AGL2 --------->ZAT6           <---------ARR11(3)<-----------------AGL1         ----------------->AGL2 ============================================================MADS_MADS     <-----------------AG ----------GT1 <---------ANAC46   ------>ZmHOX2a(1) ----------->GT1        ==========================   tttacacttggactgtgacttatggcattatctctcctcttggtgttcctcaacaggtacaaacaacaacaacaatttccatttatggaaactccgtatc  26740400                                           <---------TOE2(3)                                       <----------DOF2                                     ===========================================MADS_MADS                                     --------------->AGL15                                     <---------------AGL15                       <---------YAB1 ---ARR14(2)                      <-----------GT1                         --------->KAN4(2)      ---- -->ARR14(2)                 <----------DOF2                         --------->MYB59       --------->At4g35610 --CCA1(2)                --------->ARR11(3)                         <---------TOE1(3)     <---------At4g35610 >LBD16                   <---------ARR11(3)  ------->TEIL           <---------TOE2(3)    --------->MYB52(2) ====================================================MADS_MADS  <XXXXXXXXXXXXXXXXXXXMIR773B*   ------ ====================================================MADS_MADS<-----------------AG    --------->YAB1   ccatttttgtttgatactcaagagtcaagaccttttatactctttatggatgttttgtttgtttgtctgtttaggttattctcatcaatggtcagtttcc  26740500  Previous    Next  AGI:  At5g66920.1    Description:  SKS17 (SKU5 Similar 17); copper ion binding / oxidoreductase. similar to SKS15 (SKU5 Similar 15), copper ion binding [Arabidopsis thaliana] (TAIR:AT4G37160.1); similar to SKS16 (SKU5 Similar 16), copper ion binding / pectinesterase [Arabidopsis thaliana] (TAIR:AT2G23630.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72538.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43333.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43332.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Multicopper Range:  from: 26740049    to: 26742852    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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