Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             =========================HOX2a_HOX2a           ------>ZmHOX2a(2)          <------ZmHOX2a(2)          ==========================HOX2a_HOX2a         --------->ARR11(3)         <---------ARR14(2)         --------->ARR14(2)         <---------ARR11(3)                 <-------TEIL                                         ----     ---------->DOF2                  ---------->DOF2                                            ----  ------>MYB46(1)                 --------->ANAC58                                            -------  ------>MYB83                    --------->ANAC46                                      <-----------HVH21 ---------MYB59                   --------->ANAC58                      --------->ARR14(2)    ------- ------->DEAR3(2)            <------ZmHOX2a(1)                          <---------ARR14(2)    ------- ------ARR14(2)           <-----------RAV1(2)                        <---------MYB59    --------->LBD16 ----->ARR14(2) ---------->DOF2 --------->ZAT6    <----------DOF2    ------->GAMYB<---------GLK1(1)-- ---------------WRI1      <------NtERF2 --------->DAG2           --------->MYB46(3)    --------->ANAC46   aaccgaacaaagatccctaaaaacaggcgcaggaacactcaaaaggtccattcttttacttaaaccatcaaccgaattcacaaggtttcccgtcaaaccc  26734600       --------->At4g35610       <---------At4g35610     <---------WRKY12                                                <---------GLK1(2)    --------->DOF5.7(2)                   ----------->HVH21    ------>ZmHOX2a(1)   <-----------HVH21                ==================================HOX2a_HOX2a   --------->TOE2(3)                <------ZmHOX2a(2)          <---------YAB1   --------->TOE1(3)               <---------ARR11(3)         --------->TOE2(3) -->MYB46(1)                <---------At4g35610            --------->ARR14(2) -->MYB83                   --------->At4g35610            <---------ARR14(2) -->ANAC58                 --------->GLK1(2)              <---------CCA1(2)                       <-- -->ANAC46      ------>ZmHOX2a(1)  --------->ARR11(3)     --------->GLK1(1)                    <----- -->ANAC58      ===========================HOX2a_HOX2a    <---------GLK1(1)              <---------AHL20(1) ------->MYB46(3)  --------->At4g35610--------->WOX13(1)--------->YAB1               --------->HSFB2a(2)   aacaacgtcaactgattcctatgctgaagaagctgaagatcaatctgacagaacttaagcatatccttattgattctctcaatttttctagtatatttag  26734700          --------->O2        <---------ALFIN1      --------->SPL7    <---------SPL7                                                                               ----   --------->TOE2(1)                   --------->REM1(1)  --------->ARR14(2)                     <---   --------->TOE1(1)                  <-------TEIL        <---------ARR14(2)                   ------  --------------->AtSPL3           --------->At4g35610   <---------CCA1(2)              ---------->DOF2  --------->HSFB2a(2)   <---------HSFB2a(1)            ------>ZmHOX2a(2)            --------->ANAC46<  <---------HSFB2a(2)   <---------HSFC1(2)      <----------DOF2                 <----------DOF2------ -------GLK1(1)         --------->HSFC1(2)  --------->At4g35610         <---------MYB52(1)  --------- ----TOE2(3)            --------->HSFB2a(1) <---------At4g35610        <----------DOF2--------->ANAC46   atttctcgtaccacttgactcttggaaacttccgaacagctacatcagctctttcgatcgtatccctaagttcctttagttcctttacaccaaagtcaag  26734800                                                              ------>ZmHOX2a(2)                                                             <------ZmHOX2a(2)                                                            --------->ARR14(2)                                                            --------->AGP1                                                            <---------ARR14(2)                                                            --------->ARR11(3)                                                        <---------TOE1(1)      <---------AtLEC2                     >>>>>>>>>>>>>>>>>LFY--------->TOE1(2) ----->ARR11(3)                         --------->ARR11(3)  <---------ARR11(3) ------ARR11(3)             <---------DOF5.7(2)         <---------ANAC55(2) --->ANAC58                 --------->MYB52(1)          --------->ANAC55(2)                <--------- ----------DOF2    <----------DOF2      --------->ARR14(2) --------->GLK1(1)               <---------DAG2 --->ANAC58    --------->WOX13(1)       <---------ARR11(3) <---------GLK1(1)        <----------DOF2 >WRKY18(1)  <---------ATHB12  ------->GAMYB          --------->CCA1(2)        ---------->DOF2   ctctttttgcatcgaatcaatcttttgagttaacggaaacaatatctccattgttgatacgagatccttggacaagggtttgaaagctttgaactttttt  26734900                                    <---------At4g35610                 <-----------RAV1(2)--------->ZAT2              <----------DOF2       --------->At4g35610        --------->YAB1--------->ZAT2<---------ZAT2     --------->WOX13(1)<---------ANAC58 --------->REM1(1)  <------ZmHOX2a(1)<---------GLK1(2)                            <----------DOF2 -DOF2 <---------ATHB12<---------ANAC58   --------->LBD16               <---------ATHB12   gcttcatcaatcacaactttcaggagcttggaaaacacagcttccccaatagaacctattcccaaactagcccaatcgttcattctttcacttctcagac  26735000                                                                                      <-------TEIL              *TSS                                                                 ----------->GT1       ------------------------>ANAC81                         <------ZmHOX2a(2)   <---------MYB46(3)       --------->GLK1(2)                                 --------->DAG2         --------->ALFIN1       --------->ARR14(2)             <---------GLK1(2) --------->DAG2    <---------YAB1   --------->AHL20(2)      <---------GLK1(2)        <---------ANAC46        ---------->DOF2    ------------>CBF <---------AHL20(2)   aaaacccagaatccaaaaaaaaaaaaaaaacttgtttgtagaatcgctgaaaatcgaaaaaggggatcactgaaatatcaatgtgtggttcataaaaatg  26735100                                         --------->WRKY12                <---------ATHB12                                       <----------DOF2                   ----------->HVH21                                     <------NtERF2                  --------->ANAC46                                    ------>NtERF2                   --------->ANAC58                                  --------->ATERF1(1)               --------->ANAC58                                 <-----------HVH21                 <---------LBD16                  <                                 <---------ATERF1(1)               ------>NtERF2                  <--                                <-----------RAV1(1)                --------->LBD16          <--------                              --------->At4g35610                 <---------ANAC46          <--------           <----------ID1     <---------At4g35610            <---------ANAC58               <--------          <------ZmHOX2a(1)   --------->ZAT2                 <---------ANAC58  --------->ANAC58   <-- --------->CCA1(2)         ---------->DOF2               <-----------HVH21     --------->ANAC58   <--   tagatagacgaaggagacgaattgcatagcaaagctgtcgcctttgacttctcagactcggtcccttgccgcgcaatgaccaaggaaaacgactgcgttt  26735200                                           ------->MYC2                                           <-------PIF5                                           <-------MYC2       <----------DOF2                     <-------MYC3   <------MYB83                            ------->MYC4  <---------ANAC58   <------MYB46(1)      ------->MYC3       ------->PIF5  <---------ANAC58  --------->MYB59       <-------MYC3       ------->MYC3 --------->SPL7  <---------AtMYB61    --------->ANAC46   <---------ANAC58 <---------MYB55(1)  <---------ALFIN1     <---------HSFB2a(1) ---------MYB52(1) ------->GAMYB          --------->HSFB2a(1) -------ANAC58    --------->MYB46(3)      <---------ANAC58--------->TOE1(2) -ANAC58     --------->TOE2(3)       --------->ANAC58 <---------SPL7 -ANAC46     --------->TOE1(3)       --------->ANAC46--------->TOE1(1) -ANAC58   <---------TOE2(3)         --------->ANAC55(1)<---------TOE1(2)                          <- -------ANAC58  <---------DOF5.7(2)  --------->ANAC58--------->TOE2(1)                         ------ -------ANAC46--------->DOF5.7(2)   <---------LBD16 ------>ZmHOX2a(1)    <----------DOF2 <----------DOF2   gcgtttggtcttttacgttaaccacacgttgttcgatagacggaacgtgctctcctcgtacgtgcgagagtatgcctttcttagattgggcctttttcaa  26735300                                                         ---------->DOF2                                                   <---------ARR14(2)                                                   --------->ARR14(2)                                                <---------ANAC58                                                <---------ANAC46      <---------AHL20(2)           <-                               --------->ANAC46 --------->ANAC55(2)  <---------AHL20(2)            <-                             <-----------GT1    <---------ANAC58     --------->AHL20(2)            <-  <---------ANAC46     <---------YAB1          <-------TEIL       <---------ICU4            --------- --------RAP2.6(2)  <---------MYB52(1)       --------->TOE2(2)   <---------YAB1            <---------YAB1 ---->DOF2         <----------DOF2      --------->AHL20(2)       --------->ICU4            <---------ATHB12   agcggcttattcaaattaagcctttatgtttctacggcccaatataacatgcgtatttgaaaagctcataatttaaaatcactagtacatacaatgatac  26735400    <--------P                                                               <-----------GT1  <---------MYB46(3)                                                        <---------YAB1 --------ANAC58                                                          <---------AHL20(2)         - --------ANAC46                              --------->LBD16             <---------YAB1             < --------ANAC58                             --------->ANAC46            <---------AHL20(1)       <--- >YAB1----------->GT1       --------->AHL20(2)             --------->WRKY38(1)               <-------   agcgtggttagtaatttcattacagagcaataaactagtatcaaacccgagacatagcatgttgactcttgtaatattattactcgtttagtctagattg  26735500  Previous    Next  AGI:  At5g66900.1    Description:  disease resistance protein (CC-NBS-LRR class), putative. Identical to Probable disease resistance protein At5g66900 [Arabidopsis Thaliana] (GB:Q9FKZ1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G66910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43337.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance, plant (InterPro:IPR014011); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 26731990    to: 26735014    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g66910.1    Description:  disease resistance protein (CC-NBS-LRR class), putative. Identical to Probable disease resistance protein At5g66910 [Arabidopsis Thaliana] (GB:Q9FKZ0); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G66900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43337.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance, plant (InterPro:IPR014011); contains InterPro domain Mildew-resistance, broad-spectrum (InterPro:IPR008808); contains InterPro domain Leucine-ri Range:  from: 26735458    to: 26738482    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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