Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ----------->HVH21                                ------->MYC2                                ------->PIF5                                <-------PIF5                                ------->MYC3                                <-------MYC2                                <-------PIF4                                ------->PIF4                                <-------MYC4                                ------->MYC4                               <---------O2                               --------->O2                               =================bZIP_DOF                               --------->ANAC58                               --------->bZIP60(2)                               --------->ANAC58                               --------->TGA1a       --------->YAB1          --------->ANAC46 -------->KAN4(2)              --------->ANAC55(2) --------KAN4(1)               <---------ANAC55(2) --------HSFB2a(1)             <---------TGA1a ------->KAN4(1)             <------------OsbHLH66 ---------TaMYB80            <---------ALFIN1 ------->HSFB2a(1)          <---------At4g35610 ------->TaMYB80         <---------At4g35610 -------KAN4(2)       --------->At4g35610 ------>ARR14(2)   <---------At4g35610                                                           ---- -------ARR14(2)   <------NtERF2<-------MYC3                                                     <--- ->GAMYB         <---------RAP2.6(2) <----------DOF2                   <-----------GT1      <-------- >MYB52(1)  <---------O2 --------->At4g35610            ------>ZmHOX2a(1)        ------>ZmHOX2a(1)   aatattctttcatcacatggccgcttctgcagcacgtgactttcaagcttctgttttccttatgaactaagtttttctgtttcctccaaactattttttt  26727400       <---------ARR14(2)       <---------ARR11(3)       --------->ARR11(3)       --------->ARR14(2)       --------->ARR14(3)                   --------->ANAC55(2)       <---------ARR14(3)     <---------ARR11(3)      --------->RVE1(1)       --------->ARR11(3)      --------->CCA1(1)      <---------CCA1(2)                                   --------->ARR14(2) --------->YAB1             <---------AHL20(1)                   --------->AHL20(2) ----->AHL20(2)             --------->ARR11(3)               --------->AHL20(2)  <---------ARR14(2) < ------AHL20(2)   --------->YAB1       <----------DOF2 --------->ZAT6            <---------GLK1(2) -- -AHL20(2) ----------->GT1  <---------ARR11(3)  <---------YAB1   <---------AHL20(2)       -----------   taattagaatatcttgttatttataacgaatatatcttcttcttttacttatttttaacacaaatatttatttgtttgatacgaattctcaaaatgagaa  26727500                                                                                     <---------ZAT14                                                                              <------ZmHOX2a(1)    --           ----------->GT1                                                  --------->ANAC58   <-----      >>>>>>>>>>GT-3b                                                  <----------ARF1    <---------ANAC58 ----------ID1             ----------->GT1                             <----------ID1--------->ZAT14 ---------------------->ANAC81                         <---------TOE2(3)    --------->ANAC58   <----- ------------->ANAC81   --------->MYB52(1)--------->GLK1(2)           <------ZmHOX2a(1)   <---------ANAC58   aaacgaagaaaaatagaaaaaaatcgaaacggataaatacagagaatttagagaaaaaaggtttgtattttaggagacaaggacgagtgaagtcgtgctt  26727600                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                <-----------ARR10                                                                                <---------ARR14(2)                                                                                --------->ARR14(2)                                                                              <---------DEAR3(2)                                                                              <---------RAP2.3(1)                                                                              <---------ERF1                                                                              ------>NtERF2                                                                             --------->DEAR3(1)                                                                             <---------DEAR3(1)                                                                             <---------RAP2.6(2)                                                                             <---------RAP2.3(3)                                                                             <---------RAP2.3(2)                                                                            --------->RAP2.3(1)                                                                            <------NtERF2                                                                            ------>NtERF2                                                                            --------->DEAR4(2)                                                                            --------->ATERF1(1)                                                                --------->YAB1<---------ATERF1(1)                                                                <---------ICU4<---------RRTF1(1)                                                               <---------ATHB12--------->ATERF1(1)                                                             --------->WOX13(1)<------NtERF2       --                            <---------YAB1                --------->TOE2(3)<---------DEAR4(2)     ---      <---------AHL20(2)   --------->AHL20(1)            --------->REM1(1) <---------RAP2.3(1) ------ <----------DOF2           <---------AHL20(1)          ----------->RAV1(1) <---------ATERF1(1) ------ -------->ID1         --------->AHL20(2)            --------->ANAC58      <---------DEAR3(1)   ------ ----DAG2             <---------AHL20(2)            --------->ANAC58     <---------LBD16     -------- -----DOF2           --------->YAB1               <------ZmHOX2a(1)   ---------->DOF2 ---------->ID1   tttctttttttatttcatgttaattttaatatttttgggttatagtttcttaggaagcaacatcaatcatcaaaacgcggcggctcttgtcgtatcaaag  26727700                                                       <----------DOF2                                                   <-----------GT1                                                 <------------CBF                                                <---------ICU4                                                <--------ATHB1                                                --------->ATHB51                                                --------->ATHB12                                                -------->ATHB1                                                --------->YAB1                                               <---------YAB1                                               --------->ICU4                                               <<<<<<<<<<AGL22                                               <<<<<<<<<<AGL20                                               <---------ATHB51                                               <<<<<<<<<<AGL24    ------->TEIL                          --------->ANAC58 ------->GAMYB                <---------CCA1(2)<---------ATHB12                                  <--- ------->At4g35610            <-----------------AGL1  <---------DAG2             *TSS            <--- ------>MYB52(1)            <---------CCA1(2)--------->WOX13(1)            ------>ZmHOX2a(1)    <---- --->ANAC58                ------>ZmHOX2a(1)------------>ATHB5           ----------------->AGL1 <---- --->ANAC58               --------->TOE1(3)--------->MYB46(3)         <----------DOF2     <---------HSFB2a(2) --->ANAC46         ------------>CBF      --------->ANAC58        ------>ZmHOX2a(1)       --------->HSFB2a(2) -->DOF2  ---------->ID1  --------->TOE2(3)------------>CBF<-----------GT1--------->TOE2(3)     -----   caactgaacgttgtcgttttgggacaatccttatctcttggggcaaccaattattgccttttttcttcctctctttccttattcgttctcttcttgaaga  26727800                     --------->HSFC1(2)                     <---------HSFC1(2)                     --------->HSFB2a(1)                     <---------HSFB2a(1)                    <-----------ARR10                    <---------ARR14(2)                    <---------ARR11(1)                                           <---------ANAC46                    --------->ARR14(2)                                         --------->At4g35610         <---------AHL20(2)                                                    <---------ZAT2         --------->AHL20(2)   <<<<<<<<<TBF1                                    <---------At4g35610        --------->AHL20(2) <<<<<<<<<TBF1                                       --------->ZAT2  <-----------GT1   ------->TEIL                                              <-----------RAV1(1) ------RVE1(1)     <---------ARR14(1)                                   <---------ARR14(2) ------CCA1(1)     <---------CCA1(2)                                    <---------GLK1(2)    <-------TEIL -----ARR14(2)  <---------HSFB2a(2)  <---------TOE1(2)                  --------->ARR14(2)  --------- -----ARR11(3)  --------->HSFC1(1)  ------>ZmHOX2a(1)                 <---------ARR11(3)   --------->ARR11(1) ---->ARR11(3)  --------->HSFB2a(2)--------------------->WRI1      ----------->RAV1(1)     <---------GLK1(2)   tatttttccatttattttctcgaatcttcttcttcttcctagattccagcgacttaacaacaacaacaacaacatattctctgctgggtattagattcga  26727900                                   ----------->HVH21                                   --------->WRKY12                                   --------->WRKY38(1)--------->CCA1(2)                                  <---------MYB52(1)  <---------GLK1(1)                                 --------->At4g35610  <----------TaMYB80                                 --------->LBD16      --------->GLK1(1)                           ---                                 <---------At4g35610 <---------ARR14(2)                           ---                               <---------LBD16       --------->ARR14(2)        ======================                            <---------At4g35610  <---------MYB52(1)            ------>ZmHOX2a(2)  <--                            <---------ZAT2      <-------GAMYB         ----------->RAV1(1)         <--                            --------->ZAT2  <------ZmHOX2a(1)        --------->ANAC58            <---    <---------DAG2          <---------GLK1(1)  <---------MYB46(3)    --------->ANAC46          <-----    <----------DOF2      ------>ZmHOX2a(2) ----------->HVH21         ----------->HVH21         <----- >ARR14(1)               ==========================HOX2a_HOX2a       --------->ANAC58       <--------   atttctctttttgtgatcagaaatggatcgagctccggtgaccacaggaccgttggatatgccgattatgcacgacagtgatcgatatgacttcgttaag  26728000         ----------->GT1        <---------HSFB2a(2)        --------->HSFB2a(2) ------>ARR14(2) ------>ARR11(3) ===HOX2a_HOX2a                                                <---------At4g35610 -------ARR11(3)                                           <-----------RAV1(1) -------ARR14(2)         <---------ANAC58                <---------ANAC58 ---ZmHOX2a(1)           <---------ANAC58                <---------ANAC58 ----TOE1(3)        <-----------RAV1(1)                <---------ARR11(3) ----TOE2(3)        --------->ALFIN1                   --------->ARR11(3)<-------TEIL <----------ID1 -MYB52(1)<---------MYB52(1)      <---------YAB1   ---------->DOF2<-----------HVH21  <------ZmHOX2a(1)   gatattggttctggtaatttcggtgttgctcgtcttatgagagataaactcactaaagagcttgttgctgtcaagtacatcgagagaggagacaaggttt  26728100                      --------------->AGL15                      <---------------AGL15                      <<<<<<<<<<<<<AGL25<---------ARR11(3)                     ----------------->AGL3                     ----------------->AGL2                     <-----------------AG                     <-----------------AGL2                     <-----------------AGL3  <---------AHL20(2)                     <-----------------AGL1  --------->AHL20(2)                <----------DOF2         --------->ARR11(3)                                        ---        <---------ARR11(3)             --------->YAB1        ------>ZmHOX2a(2)         <----------DOF2        --------->ARR11(3)            <---------YAB1 --------->ZAT14           <------MYB46(1)   <---        <-----------ARR10   <---------HSFB2a(2)      <---------ZAT14           <------MYB83      ----       --------->RVE1(1)    --------->HSFB2a(2)      --------->ZAT18      <---------ZAT6     <-------   catttttaaaaatctcatctttttctatttttggaagttgatgatatttatttagtccagtgatcgttcatttttagtgtttggtttagctttcactttc  26728200            <---------ANAC58            <---------ANAC46                        <----------DOF2            <---------ANAC58                     <---------YAB1   <---------AHL20(2)                   <---------YAB1                                       ------>ZmHOX2a(1)   --------->ATHB12        <---------ANAC58--------->ICU4                              --------->At4g35610 ------>LBD16              <---------ANAC58<---------YAB1          <---------TOE2(3)   <---------At4g35610 ------HSFB2a(2)         <---------DOF5.7(2)<---------ICU4    <----------DOF2     --------->CCA1(2) ----->HSFB2a(2)   ---------->DOF2  --------->ARR11(3)   <---------ANAC58     <---------TOE2(3) ----- ---DOF2   --------------->AtSPL3   <---------GLK1(2)    <---------ANAC58    ---------->DOF2<--------   cagatttattggtttcgtacttaaagttagcgtttttagattttgatgattatgcttttgagtgcttttaatgtgattttaaagatgtgagcttcctaac  26728300  Previous    Next  AGI:  At5g66880.1    Description:  SNRK2-3/SNRK2.3/SRK2I (SNF1-RELATED PROTEIN KINASE 2.3); kinase/ protein kinase. similar to SPK-2-2 (SNF1-RELATED PROTEIN KINASE 2.2), kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT3G50500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16565.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Plant protein serine/threonine kinase-like (InterPro:IPR015740) Range:  from: 26727781    to: 26730197    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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