Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -       ---------->DOF2                                                                            ---     ----------->HVH21                                                                            <--    --------->At5g28300                                                                           ---    <------NtERF2                                                                                 ---   <---------MYB46(3)                                                                             <--  <---------ANAC46                                                                                <--  <---------DEAR3(1)                                                                              === <---------ABI4(1)                                                                                === --------DEAR3(1)                  --------->ARR14(2)                                         <------ ----->MYB52(1)                    <---------ARR14(2)           --------->ANAC46             -------- ------ARR14(2)                  --------->LBD16                --------->ANAC58       <-----------HVH21 ----->ARR14(2)                <---------LBD16   <------ZmHOX2a(1)          ----------->RAV1(1)<----- --ZmHOX2a(1)           ----------->GT1     --------->ALFIN1    --------->ANAC58       <-----------TGA1   aacggcggtgaaagcgctgggagagcgagttaaaccggaatcgaaggtggaggaagaggtagaagcacgacgttctcccaacaaaacatcgtcatccgtc  26716200                   <---------MYB46(3)                  <---------ANAC58                  =========================MYC_MYB                ------>NtERF2               ----------->HVH21       <---------HSFB2a(1)       <---------At4g35610       --------->ZAT2 --------->ALFIN1                                                             <-       <---------HSFC1(2)                                                                         ---       --------->HSFC1(2)                                                            ------>ZmHOX2a(2)       --------->HSFB2a(1)                                                  <---------ICU4       <---       --------->At4g35610--------->ATERF1(1)                              ======================HOX2a_HOX2a      ------->TEIL<---------TGA1a                                          ================HOX2a_HOX2a ---------->TGA1--------->MYB52(1)                                         =================HOX2a_HOX2a ---------->HVH21 <---------ANAC46                                         ------>ZmHOX2a(1)    ----- ------>ANAC55(2) <---------ANAC58                                         =======================HOX2a_HOX2a -------O2     --------->WRKY12                                            <---------YAB1  <---------LBD16 ------>O2     ----------->TGA1                                            --------->ICU4  ------>ZmHOX2a(2) ------>TGA1a <----------CDC5             --------->ANAC58             --------->ARR14(2) <------ZmHOX2a(2) -------TGA1a ==============MYC_MYB       --------->ANAC58        <------ZmHOX2a(2)--------->ARR14(2) -------ANAC55(2) <---------O2            --------->ANAC46       <---------ARR14(2)--------->ARR11(3) ========================MYC_MYB   <-------GAMYB                 --------->ARR14(2)<---------ARR14(2) ==========================================MYC_MYB   <------NtERF2================HOX2a_HOX2a-------- -----HVH21  <---------At4g35610   --------->At5g28300<---------DEAR3(1)<------ZmHOX2a(2)--------->ARR14(2) ->ANAC46    --------->At4g35610  ----------->GT1  <---------DEAR3(1)  <---------ARR14(2)<---------ARR14(2) ----MYB52(1)--------->LBD16  ----------->HVH21  --------->MYB52(1)  --------->LBD16<------ZmHOX2a(2)   aagtgacgaagcttccgctgacgggtgagcctgccacggttaaaacgaaacaagcggcgatgaaaccgatcccgatcctgattacgatctggatccggag  26716300                                                                             --------->ANAC58                                                                           --------->MYB52(1)                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                      --------->SPL7                                                                    --------->LBD16                                                                   <---------ANAC46                                                                   --------->HSFB2a(2)                                                                   <---------HSFB2a(2)          --------->ANAC46                                     --------->CCA1(2)          --------->ANAC58                                     <---------GLK1(1) ------TEIL                                                   <---------ARR14(2) ------>GLK1(2)                                               <---------GLK1(2) ------ARR14(2)--------->O2                                   --------->ARR14(2)             -------- ---->GLK1(1) <---------LBD16                   <------ZmHOX2a(1) <---------LBD16          --------->GLK1(2) ->LBD16  --------->ANAC58                >>>>>>>>>TBF1     ----------->ARR10--------->ANAC58<-------   attcagagtaagaagccacgggttttagagaagaagatggagaagaagaaggagacgagaacgagatttgcggaagccaacgcatagcgagagaatcatg  26716400                                                   --------->ANAC58                                                   --------->ANAC55(2)                                     <---------YAB1<---------ANAC55(2)            ---------->DOF2                                 <----------DOF2   --------->ANAC58            >>>>>>>>>TBF1                                 ------>ZmHOX2a(1) --------->ANAC46         >>>>>>>>>TBF1 ->YAB1                         --------->TOE2(3) <---------LBD16    --------->At4g35610          <-- --ICU4<-----------RAV1(2)   ------->TEIL<-----------GT1 --------->YAB1  >>>>>>>>>TBF1       --------   gtatgctcatcaggtagaagatgtgaacatgaatcctttattatttctctcttacggaattagaatcgagcagaagaagaagaagaaagacggagatgga  26716500                             ------>MYB46(1)                             --------->MYB52(1)                          --------->ANAC58               <-------TEIL--------->MYB46(3)               ------>ZmHOX2a(2)              <------ZmHOX2a(2)             <---------ARR14(2)  ----------->HVH21       --------->ANAC58                               ----------->GT1            -  ----------->TGA1--------->AtLEC2                                      --------->DAG2              < ----NtERF2  --------->ARR14(2)                                        ---------->DOF2          ----- ->ALFIN1   <------ZmHOX2a(1)------>MYB83         *TSS        ----------->GT1       <------ZmHOX2a(1)   ggcgatgacgatgaggatccatggaagaacccaacggatttaacagaaataacaaaaacaaaaccagaaaaaaaaaagtataacgaggagaagaacgaat  26716600            <----------DOF2            <---------DAG2         <-----------GT1      <---------YAB1            --------->ARR14(2)                            --------->ANAC55(2)   <---------YAB1              ------>MYB46(1)                            <----------DOF2 --------->YAB1              <---------MYB59                            <---------MYB46(3) -------->HAHB4           <------ZmHOX2a(1)                            <---------RAP2.6(2) <---------ICU4         --------->MYB59                                <---------DEAR3(1)          -- -------->ICU4     <---------YAB1                         <-----------GT1<-------GAMYB           <--- ---------ATHB12<---------AHL20(2)      <----------DOF2  <---------AHL20(2)   <---------ANAC46   <--- ---->AHL20(2)  <---------YAB1 ------>MYB83 <---------AHL20(2)<----------DOF2<---------LBD16     ----   aaatgattattttacttttttattattaggaccaaatatgttctttttattttgggaaatttatcttttagaggcggtttacgggtttagttcgagtttt  26716700    --------->ANAC58                                        <---------AHL20(2)    --------->ANAC58                                       <---------AHL20(1) --------->HVH21                                  ---------->DOF2 ------ANAC58                <----------DOF2   --------->At5g28300     <-------TEIL ------ANAC58     <----------DOF2          <---------ALFIN1--------->AHL20(1) ----->ANAC55(2)  <---------DAG2        --------->ANAC46  <---------AHL20(2)            <-----------GT1   cgtgacacggtttgcaacggctttttctggtctttttcattttcgccactgtaaaagtatatatatttgaaaattcatttttagaatatttgaccatatt  26716800                                                ----------->GT1                                               --------->DAG2                                      <---------AHL20(2)                                     --------->AHL20(2)                                     <---------AHL20(2)                                <---------CCA1(2)  <---------AHL20(2)               <---------ARR14(2)   <---------AHL20(2)                     <-----------GT1-----------          ----------->GT1    <-------TEIL     ---------->DOF2            --------->AHL20(2)   tgacttagtaatttgtaaatctgaacttaaattcgtatattaattttaaaaagttaatttagaagtttatttgaattaaactattttgtgagtggtatat  26716900                                                                         <---------MYB52(1)                                                         <---------AHL20(2)                                                        <---------AHL20(2)                                             <---------AHL20(2)         --------->TOE2(3)                                          <---------AHL20(2)  <-----------GT1                 --------->AHL20(2)  <---------AHL20(1) --------->AHL20(2)                 <---------AHL20(2)  --------->AHL20(1) <---------AHL20(1)               --------->YAB1        <---------AHL20(2) --------->AHL20(1)       <----------DOF2             --------->AHL20(2)      --------->AHL20(2) <---------ARR11(3)       <---------DAG2 >GT1    --------->ZAT6 ----------->GT1 <---------YAB1  --------->ARR11(3)    <-----------GT1   -----   atcatatatgaacactaaaataaatgtggtaatttctaatttattattttatgtagaatatattttactacaaacgttattcacttttcttagtttttgt  26717000                                                         <---------ATHB12         <---------ICU4                             --------->ANAC46         <---------AHL20(2)                        -------->P         --------->YAB1         --------->AHL20(2)                        ------>MYB46(1)   <---------YAB1      <---------AHL20(2)                         <---------MYB111(1)--------->AHL20(2)     --------->AHL20(2)             <----------DOF2------>MYB83    <---------ICU4   --------->TOE2(3)      ---------->DOF2        <---------MYB59  <---------YAB1 ----->ID1  <-----------GT1    <-------TEIL    ------->TEIL       --------->ICU4               ------   ctctacattaattttttctattcattttcaaagttcatcttttgtcatgaacctactccatcatccacattattatagcattagattgtttcttcattta  26717100  Previous    Next  AGI:  At5g66850.1    Description:  MAPKKK5 (Mitogen-activated protein kinase kinase kinase 5); kinase. similar to MAP3KA (Mitogen-activated protein kinase kinase kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT1G53570.1); similar to MAP3KA (Mitogen-activated protein kinase kinase kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT1G53570.2); similar to MAP3KA (Mitogen-activated protein kinase kinase kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT1G53570.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO16556.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); cont Range:  from: 26712833    to: 26716550    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version