Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ANAC58              --------->ANAC58         --------->ANAC58         --------->ANAC46                                                    <---------YAB1         --------->ANAC58                                                  <-----------GT1  <---------YAB1                     <----------DOF2            <---------MYB52(1)  XXXXXXXXXXXXXXXXX   ttttaaaattgaagcaacgcatatgtctattgtcttcgtctttagacatctcttgtctgtccattcgttattagctattaccattcaactccaacttctc  26689800                                                                     <---------ANAC58    <---------WRKY18(1)                                     <---------ICU4    <------------CBF   --------->WRKY38(1)--------->ICU4                       --------->ICU4    <---------ICU4         -   --------->WRKY12 <---------ICU4                <-----------HVH21  <---------ANAC58          <-----   --------->WRKY45 --------->ATHB12    <-------TEIL      <---------AHL20(2) --------->ATHB12 ------- XXX>MIR773B       --------->ICU4      --------->GLK1(2)----------->TBP    <----------DOF2--------->LBD16   tctcgttgactgtgttatctagtgattactatgcctcagagattcagaaatatgtcatataaaaattactagcgtttctttattgcagtttccccatata  26689900                                                              <------MYB83                                                              <------MYB46(1)                                                             --------->MYB59                                                             <---------AtMYB61                                                          --------->ATHB12                                                      -------->ATHB1                                                      --------->ATHB51                                                      <---------ICU4                     --------->ANAC58                                        ---------->DOF2<------------CBF           ----------->GT1                                  --------->ARR11(3)  --------->ATHB12      ----------->HVH21                                  --------->AHL20(1) <---------ATHB51      --------------->AGL15                                  <---------AHL20(1) <---------AHL20(2)   <-----------------AG                              ------>ZmHOX2a(1)      <---------YAB1       <-----------------AGL1 <--- ----------->CBF             --------->TOE2(3)     --------->YAB1         ----------------->AGL1 ---- ----AHL20(2)       <---------AtLEC2<------------CBF --------->ICU4<-----------RAV1(1)   --------->ANAC58 -->AHL20(2)      <-----------GT1 <---------AHL20(2) --------->AHL20(1)   ----------------->AGL2<----   atggcaatgcagcgagaaatttacatggtttcctaaaatattgaaaggcccaaaaattattgtttggtcttgttgggcctgaaatggaaataagcaaata  26690000                                                                                                -----                                <---------GLK1(1)                                              ------                                --------->CCA1(2)                                              ------                               <---------ARR14(3)                                              ------             <---------AHL20(2)--------->ARR14(2)                                             <------            <---------AHL20(2) --------->ARR11(3)                                             -------         <---------AHL20(2)    <---------ARR11(3)                 <------------CBF         <---------   --------->YAB1              --------->ARR14(3)             --------->ANAC58          <---------REM1(1)  <-------TEIL                 <---------ARR14(2)             --------->ANAC58    <-----------GT1 ------ANAC55(2)        ---------->DOF2                     --------->CCA1(2)    <-----------GT1----- ----->ANAC55(2) <---------AHL20(2)             --------->At4g35610             <---------AHL20(2) -- ---TEIL --------->AHL20(2)  ----------->ARR10  <---------At4g35610            --------->YAB1 -------   catattcatatttttttattttttttcaaagaagatattcgatatttatcaactgatataagataagctattgggcttctattttaacagttgtaacccg  26690100                                                       <-------PIF5                                                       ------->PIF5                                                       ------->MYC4                                                       <-------MYC3                                                       <-------MYC4                                                       ------->MYC3                                                       <-------MYC2                                                       ------->MYC2                                                      <---------TGA1a                                                      --------->PIF3(3)                                                      --------->O2                                                      <<<<<<<<<<HY5                                                      >>>>>>>>>>HY5                                                      <---------O2 ->NtERF2                             <---------ARR11(3) --->ANAC46                    ----------->HVH21      <---------PIF3(3) --->ANAC58                  <---------ANAC58         <---------bZIP60(2) --->ANAC58                  <---------ANAC58         --------->bZIP60(2) ---LBD16                  <---------At5g28300        --------->TGA1a    --------->ARR14(2) >GAMYB  --------->ZAT18  <-----------GT1   --------->YAB1          <---------ANAC46 --GT1---------->DOF2    <---------YAB1  =======================bZIP_DOF <---------ARR14(2) ---->LBD16           --------->AHL20(2) <----------DOF2       --------->YAB1 --------->GT1        <---------YAB1  --------->ARR11(3)      --------->ICU4   <---------GLK1(2) -->MYB46(3)          <---------AHL20(2)------>ZmHOX2a(2)     --------->AHL20(2)                  ---   ccagtaaaaaatgcgctagcttatattattaccgtgactcgatctttcaaaatgccacgtggcatttattatgtggatttggattttctaacttgttctc  26690200                                                                                 --------->At1g77200                                                                                 --------->DREB2C(2)                                                                                 --------->RAP2.3(3)                                                                                 --------->DEAR4(1)                                                                                 <---------ETT(1)                                                                                 --------->DEAR3(1)                                                                                --------->ATERF1(1)                                                                            <-----------HVH21                                                                       --------->GLK1(2)                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)                                                                      <---------GLK1(2)                                                                  <------NtERF2 --------->ERF1                                                                 <---------ATERF1(1)                                                                 --------->ORA47(1)                                                                --------->DEAR3(1)------>NtERF2                                                --------->ANAC46--------->ATERF1(2)                                               --------->MYB46(3)<---------SPL7 --------->RAP2.3(1)                                               <---------MYB55(2)------>NtERF2  <------NtERF2--------                           ---------->DOF2    --------->ANAC58  <---------DEAR3(1)--------->ORA47(1)                       --------->ANAC58       --------->ANAC58  <---------ATERF1(2)   ---------->DOF2                   --------->ANAC58          --------->ANAC46  --------->ATERF1(1)----------->RAV1(1)                   --------->ANAC46         <---------ALFIN1   <---------LBD16 ------>NtERF2 <------- --------->ANAC55(2)   --------->ANAC58  <------ZmHOX2a(2)    ----------------------->TaNAC69(2) --------->ANAC46  --------->ANAC58      --------->PCF2      ------>ZmHOX2a(2) <---------RAP2.3(1) --------->ANAC58----------->RAV1(1)    <---------ARR14(2)  <------ZmHOX2a(2)  <---------ATERF1(1) --------->ANAC58<---------ALFIN1  ------>ZmHOX2a(2)       <---------ARR11(3) --------->DEAR3(1)    < --->ZmHOX2a(1) --------->MYB46(3)<------ZmHOX2a(2)        --------->ARR11(3) <---------DEAR3(1)-----   ctcacgaaacaaaattcacccacacaagacaaagcgatcgtcgatcccacccacaatctaagatcgccggccgattctcgtcgccgacaaaagaagaacc  26690300                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                 ----         --------->ANAC58                                                          --------->GLK1(2)-         --------->ANAC58                                                 <---------At4g35610    <---       ---------->DOF2                                                 <---------MYB52(1)        <---      <------ZmHOX2a(1)                                               --------->TOE2(3)          <--- ->ARR14(2)                   ----------->GT1                        <---------ANAC58           ----- --ARR14(2)                 ----------->RAV1(2)            <---------YAB1 --------->At4g35610   <---- ------ZmHOX2a(1)         <---------ALFIN1               --------->YAB1--------->DOF5.7(2)      ----- ---->TOE1(2)             --------->ANAC46     <----------DOF2       <---------ANAC58           -----   gaggaagaggaaagcaactatggattccacacctgtaaattgggaagcgcttgatgctctcatcatcgatttcgttagctctgaaaacctggttgaagac  26690400          <---------MYB52(1)         ------>NtERF2         <-----------HVH21         <---------RAP2.6(3)        --------->RRTF1(2)        --------->ATERF1(2)        --------->RAP2.6(2)        --------->RAP2.3(2)        --------->DEAR3(1)        <---------ATERF1(2)        --------->RAP2.3(3)        --------->RRTF1(3)       --------->RAP2.3(1)       <------NtERF2       --------->RRTF1(1)       --------->ERF1       --------->ATERF1(1)      <---------ATERF1(1)      ------>NtERF2      --------->ABI4(1)     --------->DREB2C(2)     --------->RRTF1(3)     --------->RAP2.3(2)     --------->ATERF1(2)     --------->RAP2.3(3)     --------->RAP2.6(2)     --------->DEAR3(1)     <---------DEAR3(1)     --------->RRTF1(2)    --------->ORA47(2)    --------->ERF1    --------->RAP2.6(1)    <------NtERF2    --------->RRTF1(1)    --------->RAP2.3(1)    --------->ATERF1(1)    --------->DEAR4(2)   <---------At4g35610   ------>NtERF2   <---------DREB2C(1)   <---------ATERF1(1)   --------->At4g35610   --------->ABI4(1)   <---------RAP2.3(1)   <---------DEAR4(2)  --------->ANAC46  <---------ATERF1(2)  <---------DEAR3(1)  --------->RRTF1(3)  --------->ATERF1(2)  --------->RRTF1(2)  --------->RAP2.3(2)  --------->DEAR3(1)  <---------ALFIN1  --------->RAP2.3(3)  --------->RAP2.6(2) --------->ORA47(2) <------NtERF2 --------->RAP2.3(1) --------->ATERF1(1) --------->ERF1 --------->RAP2.6(1) --------->DEAR4(2) --------->RRTF1(1) -------->At4g35610 ---------DEAR4(2) ---------ATERF1(1) -------->ABI4(1) ---------RAP2.3(1) ---------At4g35610 ---------DREB2C(1) ------->RAP2.3(3) ------->DEAR3(1) ------->ANAC46 ------->RAP2.3(2) --------DEAR3(1) ------>ERF1 ------>DEAR4(2) ------>RRTF1(1) ------>RAP2.6(1) ------>ATERF1(1) ------>RAP2.3(1) ----NtERF2 ------>ORA47(2) -->NtERF2<------NtERF2 ----->NtERF2 ------RAP2.3(1) ------ATERF1(1) ------DEAR4(2) ---->ANAC58                                          <---------At4g35610                     <------ -----DEAR3(1)                                  <<<<<<<<<TBF1        ------>ZmHOX2a(1)    <---------WOX13(1) ---->ANAC58          <---------ALFIN1       <<<<<<<<<TBF1        <-----------GT1  --------->ANAC46 ---->ANAC46    <-----------GT1          ------>ZmHOX2a(1) ------>ZmHOX2a(1)     --------->ZAT6 -----   gccgccgccgccgtcaattcacctccatctccattatcgtctccttcttcttcttcatctccttctatttcctcttcttcttatcactccagattgatca  26690500            <---------ZAT2            --------->ZAT2              --------->DEAR3(1)       ------>ZmHOX2a(2)                --------->RAP2.6(2)                   <---------HSFB2a(2)      <------ZmHOX2a(2)                --------->DEAR3(2)                <---------ANAC58     <---------ARR14(2)     ----------->HVH21                         <----------DOF2       ---------     --------->ARR14(2)   --------->LBD16                       <---------ALFIN1            <--------   --------->LBD16        --------->At4g35610      ----------------------->TaNAC69(2)<---------YAB1   <---------ATERF1(1)    ----------->GT1  --------->DEAR3(1)   --------->ANAC58    --------->ARR11(3)  <---------TOE1(2)   <---------ARR14(2)------->GAMYB           --------->ANAC58    <---------ARR11(3) <---------LBD16      --------->ARR14(2)--------->ANAC46        --------->ANAC46   --------->YAB1 ---YAB1 --------->LBD16<---------LBD16<------------AtMYB77   <---------ALFIN1------>ZmHOX2a(1) ---->KAN4(2)   --------->ATHB12       --------->MYB46(3)  --------->PCF2<---------ANAC58   <--------   ttcgccggatccgaagctcgattgaatccggtgacattgaaaccgccatcgatattcttcgctcccacgctcctttcgtcctcgatgatcatcggattct  26690600                                                                                      <------MYB46(1)                                                                                  <---------ARR14(2)                                                                                  --------->ARR14(2)                                                                              <-----------------AG                                                                              ----------------->AGL2                    ------->TEIL                                              <-----------------AGL2                    <-----------ARR10                                         ----------------->AG                    <---------ARR14(2)                                        ----------------->AGL3        --------->LBD16  --------->ANAC46         ----------->RAV1(2)      --------->WOX13(1)       --------->HSFB2a(2)                       <---------ALFIN1        <---------YAB1       <---------HSFB2a(2)------>ZmHOX2a(1)     <---------ALFIN1      <------ZmHOX2a(2)            <-     ------>NtERF2  --------->ARR14(2)         <---------ALFIN1      --------->ARR11(3)            <- >ARR14(2)     ----------->GT1            <---------ARR14(2)         <---------ARR11(3)          <--- -ARR14(2)     --------->At4g35610        --------->ARR14(2)        <------ZmHOX2a(1) <------MYB83<-- -GLK1(2)    <-----------RAV1(2)   <---------CCA1(2)          --------->ATHB12<-----------------AGL3-   atttcgcctccagaaacaggtgaatctcctcaaccttctatctgaatcccccccctgctaaaactgattaggatcatcaatccaaatttggtttcttagg  26690700  Previous    Next  AGI:  At5g66800.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50640.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61148.1) Range:  from: 26688649    to: 26689740    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g66810.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61150.6); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61150.4); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61150.5); similar to unnamed protein product [Vitis vinifera] (GB:CAO71830.1); contains InterPro domain CTLH, C-terminal to LisH motif (InterPro:IPR006595) Range:  from: 26690152    to: 26693839    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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