Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <---------ANAC46                      <---------ANAC58                    --------->ZAT18               <------ZmHOX2a(1)        <-----------RAV1(1)       ------>ZmHOX2a(2)       <------MYB83                                           --------->ANAC58       ===============HOX2a_HOX2a                                                     --------->ANAC46      ================HOX2a_HOX2a                                                     --------->ANAC58      <------ZmHOX2a(2)        <---------MYB46(3)                               --------->KAN4(2)     --------->ARR14(2)    <---------MYB46(3)                                  --------->HSFB2a(1)     <---------ARR14(2) --------->ALFIN1                                       <---------HSFC1(2)     <---------AGP1 --------->ZAT14          --------->HSFB2a(2)               --------->HSFC1(2)    <---------CCA1(2) <---------ANAC58     --------->ZAT2                      <---------KAN4(1) -------MYB46(3)    <---------ZAT14        <---------ZAT2                      --------->KAN4(1) -------DEAR3(2)   --------->ALFIN1       ------>ZmHOX2a(1)                    <---------HSFB2a(1) -->TGA1a    <---------TOE2(3) <------MYB46(1)                                <---------KAN4(2)   ctgttcggatctgttgaggaagtggagtgttgttggttctgttcctgctggaatttgatttgtcttccatggttttggagaacattccaagaaacatgga  26633800                  --------->YAB1                                                <---------ZAT18              ----------->GT1                                                 <---------At4g35610         <------MYB83                                           --------->ARR14(2)         <------MYB46(1)          --------->ARR11(3)            <---------ARR14(2)  <----------DOF2       --------->ALFIN1           <---------ARR11(3)         <---------HSFB2a(2)--------->ZAT18       <--------P--------->AHL20(2)                       <---------ARR14(2)  --------->At4g35610      <---------MYB52(1)      ---------->DOF2  <---------YAB1--------->HSFB2a(2)<---------ZAT14   <-----------RAV1(2)  <----------ID1    <----------DOF2 --------->GLK1(2)   <---------ZAT18   ctgtctcaggtagggacgattaataagagccaaaaagatgttgacttttatgacaaatagaatccagaaccagtgttttgagcacactttccaaacaaaa  26633900                                                                                               ------                                --------->ATHB12                                              <------                             <---------ANAC58               --------->At4g35610               <------                             --------->ANAC55(2)            <---------At4g35610               <------                       <---------ARR11(3)   --------->GLK1(2)                --------->ANAC58 <------                      <---------GLK1(1)     --------->ARR11(3)               --------->ANAC58<-------           ------>MYB46(1)   <---------ANAC58            <------ZmHOX2a(1) --------->YAB1<---------ANAC58           ------>MYB83--------->ARR11(3)   --------->ARR14(2)           --------->GLK1(2)<-------GAMYB       ------->TEIL   --------->GLK1(1)     <---------ARR14(2)    --------->ALFIN1       <---------ANAC58   ctagtgaagaacctacagaaacagaaatcttacttgatttgagaaaaatctggtctgtaggaagcagagtgcgagaatcaagacagagttttcgttgcgg  26634000                                                               --------->CCA1(2)                                                             --------->CCA1(2)                                 --------->MYB52(1)    --------->LBD16                                 ------->TEIL         <---------HSFB2a(2)                            <--------P                --------->HSFB2a(2)                           <---------MYB52(1)        <---------LBD16                          ----------->GT1            ------>ZmHOX2a(2)                         ------>ZmHOX2a(2)          <------ZmHOX2a(2)                         ================================HOX2a_HOX2a                        =================================HOX2a_HOX2a --->LBD16              <------ZmHOX2a(2)          --------->ARR11(3)             --------->TOE2(3) ---ANAC58             --------->ARR14(2)          <---------ARR14(2)           --------->ARR11(3) ---ANAC46             <---------ARR14(2)          --------->ARR14(2)           <---------ARR11(3) ---LBD16           ------>ZmHOX2a(2)              --------->GLK1(2)           --------->GLK1(1) ---ANAC58          =====================================HOX2a_HOX2a      <---------At4g35610 --LBD16           <------ZmHOX2a(2)              <------ZmHOX2a(1)       --------->At4g35610  ------   gaggctggaactaaaactgagatcggatcggtaagtacctgaaaatcgatgaggatccggaagagataagagattgagctgaaatcttagttactctgaa  26634100                                        <---------ANAC46                                       --------->ALFIN1                                       <---------ANAC46                          <---------CCA1(2)                                     <---------ANAC58                     <---------ANAC46              <---------REM1(1)      <---------ANAC58           --------->MYB52(1)   <----------DOF2 ---------->DOF2   <------ZmHOX2a(1) <---------ANAC46     ----------->GT1 <---------ANAC58<---------ANAC58 ---->DOF2 --------->ALFIN1          --------->ALFIN1  <------ZmHOX2a(1)  <---------ANAC58<---------ANAC58   agtcaaagagagagtggtgaaggagagggatggattgtggtgtggggaacaagaagaggagagaaacaactgagttgcttcttctatctttgacttgtct  26634200                                                                                            <--------                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(2)                                                                                      <---------ATHB51                              <---------ANAC46                                       <---------AHL20(1)                             <------NtERF2                                        --------->AHL20(1)                         <------MYB46(1)                                          --------->AHL20(2)                     <---------ARR14(2)                   <---------MYB52(1)      <---------AHL20(2)           --------------->AGL15                        <---------ANAC46          <---------AHL20(1)          <-----------------AGL1                        <---------ANAC58     <---------AHL20(2)         <-----------GT1 <------MYB83                   <---------ANAC58     --------->AHL20(2)        <-----------GT1 --------->MYB59         <---------ALFIN1  --------->O2 --------->YAB1 <----------DOF2*TSS --------->ARR14(2)       <---------ALFIN1    <---------O2<---------AHL20(2)   tctctttgattttcccatttgtgtatttggtcgcgagtttgacatgttccacactgtttcgtttagtcaagtcgcattttttaataaaataattctttta  26634300                                                                      <---------ZAT14                                                                      --------->ZAT14                                                                      --------->ZAT18                                             ------>MYB46(1)          <---------ZAT18                                             ------>MYB83 --------->ATHB12           <-----------GT1                 <---------MYB111(1)     <---------ANAC58      <----------DOF2                  --------->ZAT14   --------->ICU4           --------->HSFB2a(2)     --------->TOE2(3)               --------------->AtSPL8        <---------ANAC58          -------- --DOF2 <---------ICU4 <---------ATHB12<---------ZAT14   <---------YAB1           <---------HSFB2a(2)   ttcttcacctttattacactctctaatcagtctcccctctgtgtaccaactacaagttgatgattgtattcgtgcactactcttctagtactataccata  26634400                                                               <---------TOE1(3)                                                            --------->ICU4                                                 ------>ZmHOX2a(1)   <---------ANAC58                                                 --------->LBD16     <---------ANAC58                                ----------->RAV1(1)         <---------YAB1                                ===========================RAV <---------TOE2(3)                               <----------ID1   <---------LBD16<---------YAB1              ==============================RAV----------->RAV1(2)   <---------ANAC46 <---------YAB1 ------>ZmHOX2a(1)   ---------->DOF2      <---------ATHB12    ------->TEIL ------->AGL15----------->RAV1(2) --------->MYB46(3)   ----------->GT1<-------GAMYB   tttatgagtccatgactcctgactacaacgagagcaacaaaagtactattcctgggccagtgattatggtttcgttgtgaacccatctgttcattttggt  26634500                                                                                  <---------MYB52(1)                                                                                 --------->LBD16     --------->LBD16                                                            --------->ANAC55(2)    <---------ANAC46                                                            <---------ANAC55(2)    ----------->GT1           <---------YAB1                        --------->ANAC46    <---------ANAC55(1)      <---------ARR11(3)                     --------->ANAC58    <---------ANAC58         --------->ARR11(3)                     --------->ANAC58    <---------ANAC55(2)     --------->YAB1                       <---------ARR14(2)      <-----------GT1    <---------ANAC58       <---------ATHB12                <---------PCF2       ----------->GT1   <-------TEIL      ------->TEIL              --------->GLK1(2) --------->ARR14(2)   --------->YAB1<   ttagatgcgtgaaattgggaatgaatcaaatgatcatcgaaattttgagtttctatcaatgggcccaaatacgaaaacaagtccgtaattttaacttggt  26634600                                                              <---------ARR14(2)                                                             <---------MYB52(1)                                                         ------>MYB46(1)                                                         ------>MYB83                                                        --------->MYB52(1)                                                        --------->MYB55(1)                                                       <---------MYB55(2)              <---------MYB52(1)                                                       --------->MYB46(3)              --------->ARR14(2)                     ---------->DOF2                   <---------MYB111(2)             <---------ARR14(2)                  --------->ANAC46                     --------->AtMYB61 --------->ZAT14          <---------YAB1                               <---------MYB111(1)           --------->ANAC46      <---------ANAC58                        <---------AtLEC2--------->ARR14(2)     --------->LBD16      <---------ANAC58--------->DAG2   <---------AHL20(2)-------->P      <---------ZAT18           <- ---------YAB1<-----------GT1      ----------->GT1     <---------MYB46(2)--------->ZAT18   <---------   ttatttttgcttatttttacacaaaaagtcgaaagtattgtttattttgcataaacaccaaccgtttccgattagttcacacagaccccgatactttctg  26634700  Previous    Next  AGI:  At5g66675.1    Description:  Identical to UPF0496 protein At5g66675 [Arabidopsis Thaliana] (GB:Q8GW16); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G18630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Range:  from: 26632309    to: 26634216    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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