Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------WOX13(1)                                   <---------ARR14(2)                                   --------->ARR11(3)                           <<<<<<<GRF7                                   --------->ARR14(2)                   --------->SPL7        <---------ZAT18           --------->KAN4(1)                    ------>ZmHOX2a(1)        --------->ZAT18           <---------KAN4(1)                   <---------SPL7<---------ARR14(2)       <---------ZAT6            <---------KAN4(2)                <-----------GT1   --------->ARR14(2)   <---------AHL20(2)            ---------->TaMYB80  --------->GLK1(2)--------->TOE2(2) -->TOE2(3)                    <------ZmHOX2a(1)----------->HVH21<---------AHL20(2) --------->GLK1(2) -->TOE1(3)               <----------DOF2   <---------YAB1  <---------AHL20(2)----------->HVH21   agtattttagtgttctactgatatggtactttaggaatatactgatatgactgacattctatttgattttatcctacggcctgacaaatctgaaactcta  26616500                                       --------->AHL20(2)                                       --------->YAB1                                      <---------YAB1                                   <---------YAB1                             <---------TOE2(3)                            <-----------GT1                                                   -------                           <-----------GT1                 <----------DOF2             ---------->DOF2                      <---------MYB52(1)         <-----------GT1              --------->TOE2(3) -----                     <----------DOF2--------->YAB1      <-----------GT1       --------->TOE1(3) <----            <-----------RAV1(1)   --------->AHL20(2)<----------DOF2        <-----------GT1    -------   tacattctctgcaaatgttgtgcctttatttaacatttttataatatagtttttcttttctctttcccttgtatataaaaccttataagaaaagctaggc  26616600    --------->ZAT14                 <---------ARR11(3)    <---------ZAT14      <---------At4g35610    --------->ZAT18      --------->ZAT2                                              --------->ARR14(2)    <---------ZAT18      <---------ZAT2                                         --------->ANAC58 -->ANAC58               --------->At4g35610                                    --------->ANAC58 ---->ZAT18         ------>ZmHOX2a(1)                                         ---------->DOF2 -----ZAT18     <---------ALFIN1    --------->ARR11(3)                   --------->YAB1 -->ANAC58  <-----------GT1        <---------CCA1(2)            --------->AHL20(2)   <---------ARR14(2)   cactagtgcgctattctccctcctctctgctcccctagtatctctctctgtctctccctctcgagattaattcaaacatgaaaagcaaattggctctaat  26616700                                                         --------->ANAC58                                                       ---------->DOF2                                             --------------->AGL15                                             <---------------AGL15                                            ----------------->AGL2                                            ----------------->AGL1                                            <-----------------AGL2           --------->TOE2(3)                ----------------->AG       <---------HSFC1(2)                   ----------------->AGL3                     <----------DOF2       --------->HSFB2a(1)                <-----------GT1--------->ANAC58      <------MYB83       <---------HSFB2a(1)              <---------HSFC1(2)                     <------MYB46(1)     <-       --------->HSFC1(2)               --------->HSFC1(2)               <---------AHL20(2)       <--    <------ZmHOX2a(1) --------->ATHB12  --------->HSFB2a(1)              --------->AHL20(2)   <------   --------->LBD16   <---------AHL20(2) <---------HSFB2a(1) ---------->DOF2  XXXXXXXXXXXXXXXXXXXX>MIR870 <---------LBD16 <---------ICU4<----------DOF2      <---------ZAT6      --------->AHL20(2) ----------   atttcaggaaatttcttaaacatttcattgaaactttggcgaagtttccatttagagtaaagcaaagaattagatttaatttggtgtttctttggccttt  26616800                                                     ------>ZmHOX2a(1)                                                     ======================HOX2a_HOX2a                                                   ----------->RAV1(2)                                              <---------ANAC58                                              <---------ANAC58                                         ======================RAV         <---------TOE1(2)       <-     <------------------SPL14            --------->ALFIN1                  <---------TOE1(3)       <- ----------GT1                           <-----------RAV1(1)               <---------TOE2(3)   <----- ---------GT1                          <---------ANAC58             ------>ZmHOX2a(2)  <-------TEIL<- ----DOF2     --------->ALFIN1         <---------ANAC58           <---------ARR11(3)  --------->ARR14(1) >ID1<----------DOF2----------->GT1    <---------ANAC46*TSS   --------->YAB1         <---------GLK1(2)   tttccccctttgaacggtggagaagtgaatttaagagtatgtcgtgttgcttctcctgcttcaaacatgatccatctaaggtttttagattcgttttctt  26616900                                                                                              ------>ZmHOX2a(1)                                                                                          --------->ARR11(3)                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                                                   --------->ANAC58                                                                                   --------->ANAC58 <                                                                           --------->ATHB12<------ZmHOX2a(2)      <-----------GT1                                                     --------->AHL20(2)  <------ --------ANAC46          ---------->DOF2                                  <---------AHL20(2)------>ZmHOX2a(2) --------ANAC58  --------->AHL20(2)                    <---------ANAC58   <---------YAB1  <---------ARR11(3) -----DOF2    <----------DOF2   ------>ZmHOX2a(1)      <---------ANAC58<----------DOF2   <------ZmHOX2a(1) --------ANAC58  <---------AHL20(2)         <---------YAB1  --------->TOE2(2)<---------WOX13(1) -----   tgcttatattacaagtcttttaatttgaaaagtcctggtccatattttgatttctaggcttacctatgtataacttttaattggcaagccaggatccttt  26617000                                             --------->SPL7                             >>>>>>>>>TBF1   <-------TEIL                   --------->ANAC46        <---------SPL7    ------>NtERF2  --------->ANAC58  ------>ZmHOX2a(2)                                ---------->DOF2 -----------GT1    --------->ANAC58 <------ZmHOX2a(2)                           <---------TOE2(3)<--- ----DOF2         <---------LBD16  <---------ARR11(3)  <----------ID1           <---------YAB1 <----- ---->AHL20(2)   <-----------GT1   --------->ARR11(3)---------->DOF2      --------->ICU4       <-----   aaataccgccttggtaatttcacggtatgaagaagaagatcgcatggtacgtcggaaaagacaagaagaagatgaaaagattgagattgaaagggttaag  26617100                                                                                            <--------                                                                                            ---------                                                                                            ---------                           <------NtERF2                           ---------->DOF2     --------->YAB1 ---ZmHOX2a(1)       <-----------RAV1(2)                      --------->ANAC58        <---------YAB1 ----TOE2(3)        --------->ZAT2                            --------->ANAC58  --------->ZAT18 ----TOE1(3)   <---------STY1(2)---------->DOF2          <------ZmHOX2a(1)     --------->ALFIN1   gaagaaagtttgaagctagctaagcaggcggaagaaaagagaagattagaagagtcgaaggagcaaggcaaaagaatacaagtggacgatgatcagcttg  26617200                                <---------ICU4                                --------->YAB1                               <---------YAB1                               <---------ATHB12                             <-----------GT1                                   --------->DAG2                             --------->WOX13(1)                               ---------->DOF2                            --------->AHL20(2)                            <---------TOE1(2)                    <----------ID1                                        <---------TOE2(2)                  <---------------AtSPL8                  ----------->GT1------>ZmHOX2a(1)                 --------->MYB52(1)        <---------REM1(1)          ------>ZmHOX2a(1)       <------ -At4g35610     --------->CCA1(2)         --------->ARR11(3)       ------>ZmHOX2a(1)      ------>ZmHOX2a(1) >At4g35610   --------->YAB1<---------AHL20(2)  <---------ZAT6 --------->ARR14(2)     <---------ARR11(3) >ZAT2     ---------->DOF2 --------->AHL20(2) <---------ANAC46 <---------ARR14(2)    <---------CCA1(2)   caaagactacttctaaagataagggacaaattaatcattccaaagatgtagtggaagaagatgtgaatcctcctcctaggtaaagctatatcctatatat  26617300           --------->LBD16                                     <---------ANAC46          --------->ANAC46                                     <---------ANAC58         <---------ZAT14                                       <---------ANAC58      <---------ARR14(2)         --------->ZAT14                      <---------ANAC55(2)                    --------->ARR14(2)         <---------ZAT18                   <---------ATHB12<----------DOF2           --------->GLK1(2)       --------->ANAC46      --------->ARR11(3)            <---------DAG2           <---------GLK1(1)     <---------ALFIN1        <---------GLK1(2)--------->ANAC55(2)            --------->ATHB12 ---AHL20(2)                 <---------ARR11(3)         <-----------GT1     --------->ICU4   atgtgttccactgcgcaattttgtatttagagatttttggctcaaatcaagtattgttttactttacttgtagcagtattgatggcaaatctgagattgg  26617400  Previous    Next  AGI:  At5g66640.1    Description:  LIM domain-containing protein-related. similar to LIM domain-containing protein / disease resistance protein-related [Arabidopsis thaliana] (TAIR:AT5G17890.1); similar to hypothetical protein OsJ_019532 [Oryza sativa (japonica cultivar-group)] (GB:EAZ36049.1); similar to Os06g0182500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056985.1); similar to hypothetical protein OsI_021156 [Oryza sativa (indica cultivar-group)] (GB:EAY99923.1); contains domain RING/U-box (SSF57850) Range:  from: 26616855    to: 26619175    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version