Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ARR11(3)                   <---------At4g35610                               <---------ARR11(3)                 <-----------RAV1(2) <---------MYB59                              <---------CCA1(2)                  ------->GAMYB       ----------->RAV1(2)                           <---------ARR11(3)                  -------->P           ------->TEIL                     --------->LBD16                      --------->WOX13(1)   --------->At4g35610                --------->ATERF1(1)                     <---------YAB1         <---------At4g35610               <---------At4g35610                    --------->AHL20(2)     --------->DAG2               <---------ATERF1(1)                    --------->YAB1--------->At4g35610         ---------->DOF2   --------->ARR11(3)        <---------ATHB51       ---------->DOF2 -------DOF2   ------>NtERF2--------->CCA1(2)        <---------ATHB12 ----------->HVH21   tttccaagaagtaatgcagcctccgaagagatatatctcagcctcgctgcatccaattataaatcaacccagatgacataaagctgaacctgacttactt  26572500                                                                                         --------->ZAT14                                                                                         <---------ZAT14                                                                                       --------->ANAC46                                                                             <---------At4g35610                                                <-----------------AGL1   <-----------HVH21    <------                                              <------ZmHOX2a(1)          ------>ZmHOX2a(1)  <--------          <---------WRKY38(1)       <------ZmHOX2a(1)            <---------ANAC58      --------->ANAC58       ----------->GT1 <-----------GT1       <----------ID1      <---------ANAC58      --------->ANAC58   agtatgagatggtcaatagtttttgatacctgttctgaggagaagtaaggacaagttttggcaaattgccttctccttcagcgactctcactccagtagt  26572600                  <---------HSFC1(2)                  --------->HSFC1(2)                  <---------HSFB2a(1)                  --------->HSFB2a(1)                 <-----------ARR10                 <---------ARR14(2)                 <---------ARR11(3)                 --------->GLK1(2)                 --------->ARR11(3)                 --------->ARR14(2)                    <---------ANAC58                <---------GLK1(2)                      <---------ANAC46   --------->ANAC58                     <------ZmHOX2a(2)   --------->ANAC58                    --------->ARR11(3)                                         --- ---MYB46(3)    <---------ARR14(1)     <---------ARR11(3)    <------ZmHOX2a(2)                  ----- -MYB52(1)   <------NtERF2      <---------ARR11(3)     <---------ANAC58                     ---------   tgaagaagccatggcagagaatcttcttctgcaatatccaagatcgagtttttttttgtgtggatcaaatgcaaggtagagacattagaagcgaaaccaa  26572700                                           --------->ZAT2                                           <---------ZAT2                                           --------->At4g35610                                   ----     <----------ID1          <---------LBD16                ---------->DOF2        ----------->GT1 -------->GT1   ----------->GT1--------->LBD16  <---------WOX13(1)                --------->ANAC58 ----->DOF2---------->DOF2  --------->MYB52(1)--------->ATHB12                    --------->ANAC58 --------------->ANAC81    <-----------GT1 <---------At4g35610       ---------->DOF2        ------->GAMYB   aagaaaaaaaacaaaatgcagtaagaatattaccggctaaatcggagctgattgggagaattgaaagtgagaaaagagttagagacggaaacaatcgcca  26572800                                                               ------>ZmHOX2a(1)                                                           --------->ARR14(2)                                                           <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                           <-----------HVH21                                                          --------->LBD16                                                         --------->LBD16                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                       <xxxxxxxxxxxxxxxxsmallRNA(s)                                                       <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                      <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                <---------ANAC46                                                <---------ANAC58                                                <---------ANAC58                                          <---------ARR11(3)  <xxxxxxxxxxxxxxxxxsmallRNA(se3)                                          <---------AHL20(1) <xxxxxxxxxxxxxxxxxsmallRNA(se3)                                          --------->ARR11(3) <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                                          --------->AHL20(1)<xxxxxxxxxxxxxxxxxxsmallRNA(se3)                                         <---------CCA1(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                       ------>ZmHOX2a(1)<---------LBD16                        <-----      <-----------GT1              --------->ARR14(2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    ---------- ----->ICU4   ------>ZmHOX2a(1)    <---------ARR14(2)------>ZmHOX2a(1)       ----------->RAV1(1)   tttttgtttttctctccttcagtcactctctatctagtatcctatatattgcgtccttcccggtcctctcgtactagggcaacaagaagaaggaaaagga  26572900                                                                                               ------                                                                                               <-----                                                                                               <-----                                             --------->At4g35610                          <----------                 *TSS<---------MYB46(3)      <---------At4g35610     <---------AHL20(2)   <---------AHL20(2)           <---------YAB1                --------->ANAC58    <---------AHL20(2)       <---------AHL20(2)        --------->GLK1(2)                --------->ANAC58    --------->AHL20(2)      <---------YAB1<-       <---------ARR11(3)                --------->ANAC46   --------->ICU4          --------->AHL20(2)       --------->ARR11(3)              ---------->DOF2 ----------->GT1    --------->MYB52(1)  <------ -ZmHOX2a(1)--------->ATHB12  --------->AHL20(2)      <---------TOE2(3)  --------->RVE1(1)--------->AHL20(2) >DOF2 <---------GLK1(2)    <------------CBF----------->RAV1(1)      --------->AHL20(2) <-----------TBP   ttgaatagagattttgatttgggtcgatgaaattgaatactaaacgcagcaaaactaatgtaattttttaaaaaaatatcggacatttttatttatatat  26573000                                                                           ---------->DOF2                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                    <---------DEAR3(2)                                                                   --------->ETT(1)                                                                  --------->ALFIN1   --------->LBD16                                               <-------GAMYB               <-------  --------->ANAC46                                               <-----------HVH21         --------->ZAT6  <---------HSFB2a(2)         ----------->HVH21                 <---------MYB46(3)      <---------WRKY18(1)  --------->HSFB2a(2)         ----------->TGA1                  <---------SPL7         --------->WRKY38(1) <---------LBD16          <---------ANAC46                     <---------DREB2C(2)     --------->WRKY12 --->ARR11(3)          ----------->HVH21                       <---------RAP2.6(2)     --------->WRKY45 ----ARR11(3)   --------->TOE1(2)                  --------->ARR14(2)  --------->PCF2 --------->DOF5.7(2) ------GT1     --------->MYB46(3)                  <---------ARR14(2)<------NtERF2   --------->TOE1(3) -TBP   <----------ID1 ----------->TGA1       --------->MYB52(1)<---------DEAR3(2) <---------TOE1(3) --------ARR14(2)--------->MYB52(1)          --------->ARR14(2)<---------ANAC58    <---------TOE2(3) ---CCA1(2)    <---------MYB52(2)            <---------ARR14(2)<---------ANAC58   <---------DOF5.7(2)   ctatccggaagagacaaacaaacgaatgacgagtgacgacgatggagaaaccggctcttcaaatggcggtcgggacccaaagtttaacgttgaccactaa  26573100                                 ------>ZmHOX2a(1)                             <---------ARR11(3)                             <---------ARR14(2)                             --------->ARR11(3)                             --------->ARR14(2)                            --------->GLK1(1)                            <---------KAN4(1)                 --------->ARR11(3)                            <---------GLK1(1)                 <---------ARR11(3)                            --------->KAN4(1)                --------->CCA1(1)         --------->ARR11(3)---------->TaMYB80              --------->AHL20(2)      --------->YAB1       <---------KAN4(2)               --------->YAB1      --------->AHL20(2)<---------YAB1                    <---------ATHB12   --------->ALFIN1 --MYB52(2)      <---------TOE2(3)                    <---------YAB1---------->DOF2 <---------MYB46(3)   cttgagaataatatcgtttatggattacgaatatccttcttaagtccgactaacttatcaataatatctacaaagaagggtatgggctgttcaatacatt  26573200                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                   <x                                                                                                   <x                                                                                            ---------                                                    <xxxxxxxxxxxxxxxxsmallRNA(s)  <xxxxxxxxxxxxxxxxxsmallRNA(si3)                                                   <xxxxxxxxxxxxxxxxsmallRNA(s)<-------GAMYB---------                                             --------->ANAC58        ----------->HVH21      ---------                                             --------->ANAC58        --------->WRKY12------->GAMYB<xx                                             --------->ZAT6         <xxxxxxxxxxxxxxxsmallRNA(le3) <xx                                       <---------ZAT18  <xxxxxxxxxxxxxxxxsmallRNA(s)--------->MYB46(3)                                       --------->ZAT18  <xxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------ALFIN1                                <---------ICU4    <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------ALFIN1               <---------YAB1<---------AHL20(2)   <xxxxxxxxxxxxxxxxsmallRNA(s)<---------MYB46(3)  <xx           --------->YAB1   --------->AHL20(2)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ANAC46          <---------ICU4   <---------YAB1  --------->MYB52(1)   ------->TEIL  <xxxxxxxxxxxxxxxxxsmallRNA(se3)   ccaccaggtccaatattactaatgggcttattaaaaattagtgcataacgctagagagaggggtcgaacctctgaccttgtggttaacagccacacgctc  26573300       <xxxxxxxxxxxxxxxsmallRNA(se3)       <xxxxxxxxxxxxxxxsmallRNA(si3)       <xxxxxxxxxxxxxxxsmallRNA(fl3)       <xxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxsmallRNA(i)      <xxxxxxxxxxxxxxxxsmallRNA(s)     <xxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <xxxxxxxxxxxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxxxsmallRNA(si3)   ----------->RAV1(2)   ------>MYB46(1)   ------>MYB83   <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxsmallRNA(s2)   <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->MYB52(1) ------->GAMYB <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------->MYB46(3)    *TSS xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) >ANAC58         <---------At4g35610 >ANAC58         <---------ZAT2 >ANAC46<---------At4g35610                 <-----------GT1       <----------DOF2                   - xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)     <----------DOF2       <---------TOE2(3)        <---------ZAT14 xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------DAG2     <----------DOF2    <---------ATHB12 ------- xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<-----------GT1 <-----------GT1      ------------>CBF     <------   taaccaactgagctactccagcttatttgttctatctattacctttttactatttcacttctttgaggcttttagcccaatcgaaagactatagagtggt  26573400  Previous    Next  AGI:  At5g66530.1    Description:  aldose 1-epimerase family protein. similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT5G57330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22828.1); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:IPR011013); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding, subgroup; (InterPro:IPR014718) Range:  from: 26570970    to: 26572917    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g66535.1    Description:  pre-tRNA. tRNA-Asn (anticodon: GTT) Range:  from: 26573249    to: 26573322    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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