Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------ANAC46                    --------->YAB1                    --------->ATHB12             --------->At4g35610          ---------->DOF2<---------ANAC58                ------->TEIL       ---------->DOF2   <---------ANAC58        <---------TOE2(3)                  ---------->DOF2   --------->ZAT18  <---------ICU4           <----------DOF2            <---------YAB1   <---------ZAT18--------->GLK1(2)   <----------DOF2------->TEIL    ------>ZmHOX2a(1) ----------->GT1   atttgtccacaaagaagcagaatcatggcttatggacgagctttctactttgatgtatgtatgtattcatccttcttattcaaatagaaaggtatatcac  26564600                                                                   <-------TEIL                                                                <------MYB83                                                                <---------At4g35610               <-----------GT1                                  --------->At4g35610               --------->ANAC46                         <---------AHL20(1)                         <-       <---------AHL20(2)                               --------->ARR11(3)                         <-       --------->AHL20(2)                   <------ZmHOX2a(2)   <------MYB46(1)          <---------ALFIN1 ----------->GT1   -------->P      <----------DOF2      <---------AHL20(2)   <---------ZAT6     -----   aaatcgaaaataaatataaacaacctctgtgaaatctctttctccgatctatctgtaatatatggcaggtccatttgaagtgttatcccaaacacctcct  26564700                         --------->ARR14(2)                         <---------ARR14(2) ----------->HVH21  --------->MYB52(1)                       <<<<<<<<<TBF1 --------ANAC58     ------>MYB83                       <<<<<<<<<TBF1 <----------DOF2 --------ANAC58     ------>MYB46(1)            <---------ZAT18     ------>ZmHOX2a(1) ->ZmHOX2a(1)   ------->TEIL               <------NtERF2  <<<<<<<<<TBF1                    --------->AHL20(2)   tccttgacatactccaagtacctagcgaattctggttttgcagtcgtcgtgctcttcttcttcttcttcctctttagactcatttcgaagaaactaaata  26564800                                                   <---------WRKY18(1)                                                  --------->WRKY38(1)             ----------->RAV1(2)                 <---------WOX13(1)          ------->TEIL                       --------->LBD16                  <---------LBD16         <---------ALFIN1                   --------->HSFB2a(2)         <---------HSFB2a(1)         <---------ARR14(2)                 <---------LBD16             --------->HSFB2a(1)         --------->ARR14(2)                 <---------HSFB2a(2)         --------->ANAC58     --------       --------->DEAR3(1)                  <---------ANAC46             --------->ANAC58   <---------HSFB2a(2)     --------->At4g35610                   <---------LBD16           <------ZmHOX2a(1)     --------->HSFB2a(2)     <---------At4g35610             <-----------GT1         --------->ARR14(2)   --------->ARR14(2)  --------->ALFIN1       <---------ALFIN1 <---------LBD16    <---------ARR14(2) --------->LBD16     <   gagggtgagccgaacccctggttttctccaccggtttattcaccttcggggattgaccatggggatttgtaggaacgctctccggtttcacttctaaaag  26564900                                                                           <---------ICU4                                                                          --------->ICU4                                                                --------->ZAT14                                                                --------->ZAT18 <---------ANAC58                                                                <---------ZAT18 <---------ANAC58                                                              <---------At4g35610                                    --------->ZAT2   ------>ZmHOX2a(1)    <---------YAB1                              <---------ANAC46    ------>MYB46(1)       --------->YAB1                     ------>NtERF2  <---------ZAT2------>MYB83--------->At4g35610                    <---------DEAR3(1)         <---------HSFC1(2)       <---------ICU4    --------->ATERF1(1) ------>NtERF2          --------->HSFC1(2)       <--------HAHB4    ----------->RAV1(2)--------->DEAR3(1)      --------->HSFB2a(1)     <---------YAB1   <---------ATERF1(1)<------NtERF2 <---------At4g35610------->PIF5    <---------ATHB12   ------>NtERF2  <-----------HVH21 --------->At4g35610<-------PIF5    --------->ICU4   <---------RAP2.3(1)--------->ATERF1(1)      <---------HSFB2a(1)   --------->YAB1 -->DOF2     <<<<<<<<<TBF1<---------ZAT2      ------->TEIL  ---------->CDC5--------->ATHB51   *TSS ---------ATERF1(1) --------->DEAR3(1) ------>NtERF2--------------------->WRI1  <---------ANAC46   ccctgcgcctgcttcttcttcgtcgccgagcttcttgtagctgcctcgaaccttcctcgtgctcagcgctctaatcattatttcttgtggttttgatcaa  26565000                                          <------ZmHOX2a(1)                               --------->ARR11(3)                               <---------ARR11(3)                                                   <                               <---------GLK1(2)                                                <----                             ----------->ARR10                                      <----------DOF2 -                          <------ZmHOX2a(1)       <----------DOF2            --------->MYB46(3) -----                      ---------->DOF2    <----------ID1             ------>ZmHOX2a(1)    --------->TOE2(3)                    <---------TOE2(3) ---------->DOF2 <-----------GT1      --------->MYB52(1)   -----   ttctctctggtgatatgtttttaagaaaggatagattttgaaaaggacacatcttttgacttctcttctccttatcccaacgactcctttaacttaaacc  26565100                                     <---------WRKY12                              <---------ANAC58  ----------->HVH21  ------>MYB83    <---------WRKY38(1)                                  <---------WRKY12 ---------ANAC55(2)  -------->P    <-----------HVH21                                    <------ZmHOX2a(1) -----DAG2           ------>MYB46(1)--------->WRKY18(1)                               --------->MYB59 -------->ANAC55(2)<---------MYB111(1)            <---------YAB1               <-----------------AGL1 ---->TOE2(3) <-----------HVH21<---------LBD16<---------DAG2             <---------MYB46(3) ---->TOE1(3)<----------DOF2  <---------ANAC58<----------DOF2      <----------DOF2   <---------ICU4   ttatgtgacattgccctttcacctactactattcgtgggtcaatgctactttatttttgactatgtcttctttggtgtttgacttaattaggacaacgag  26565200                                                                               <---------------------WRI1                                                                              --------->ICU4                            --------->ZAT14                               <---------ZAT14               <----------DOF2                                           <---------ZAT6      --------->ANAC46      <---------ZAT14                            <---------ANAC46    <---------HSFB2a(2)     <---------ZAT18                          --------->ZAT14        ---------    --------->HSFB2a(2)     --------->ZAT18                          <---------ZAT14        --------- <---------ARR14(2)    <---------ZAT14     <---------ANAC58          --------->ZAT18      ---------->DOF2 --------->ARR14(2)   <----------DOF2      <---------ANAC58  --------->At4g35610 ----------->GT1   acagttccacaacaatgctttagactttagtggacttgctctgtttcttgacacaaaaacagtagctcaagtgtagtgtaatgctgaaaaaacaaagcaa  26565300                                     <----------DOF2                               <---------MYB59                            <-----------GT1                    <---------At4g35610                   ------>ZmHOX2a(1)--------->TOE2(3)                 <---------ANAC58------>MYB83                         ------->GAMYB >ANAC58         <---------ANAC58------>MYB46(1)                     --------->ANAC46<---------ALFIN1 >ANAC58  --------->At4g35610  --------->AtMYB61       ------>ZmHOX2a(1)     <---------ALFIN1   ttcatatgaataagctgtgtcctgctgttttaaccaaacctttattcttcagttttcctctcaattcttcaacgacatcccacttccccatcgctgcata  26565400                                                                                    <---------ARR14(2)                                                                                    <---------ARR11(3)                                                                                    --------->AGP1                                                                                    --------->ARR11(3)                                                                                    --------->ARR14(2)                                                                                 --------->SPL7                                         <---------CCA1(2)                    <---------ANAC58                                        <-----------HVH21                     --------->ANAC55(2)            <---------ALFIN1           --------->O2                           <---------ANAC55(2)           ------>MYB83             --------->ARR14(2)                        <---------ANAC58 ------           ------>MYB46(1)       --------->HSFB2a(2)--------->ANAC58          <---------ANAC46<------          ----------->RAV1(1)   <---------LBD16     --------->ANAC58<---------GLK1(2)<------ZmHOX2a(2)         --------->AtMYB61<---------ANAC58      --------->HSFB2a(2) --------->ARR14(2)---------------        --------->MYB46(3)<---------ANAC58      <---------HSFB2a(2) <---------ARR14(2)<-------TEIL  -   gaaattcgaaaccaacacataaatgctcgcgttctctggacccgtctcttccataagcctccttgctacatattcgcctcgcgtaagatccatattaaga  26565500  Previous    Next  AGI:  At5g66490.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50900.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45855.1) Range:  from: 26564453    to: 26564994    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g66500.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G03580.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45856.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 26565221    to: 26566903    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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