Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ---------->DOF2                                                  --------->MYB52(1)                                                  ----------->RAV1(1)                                                 --------->ANAC46                                               --------->ANAC46                                               --------->ANAC58                             <---------GLK1(1) --------->ANAC58                             --------->GLK1(1)<-------TEIL                 <---------ARR11(3)          --------->CCA1(2)                          ------->TEIL         --------->ATHB12--------->YAB1     <---------ARR14(2)                       --------->ICU4        <---------YAB1--------->WOX13(1)    --------->ARR14(2)  <-------GAMYB  --------->DAG2 -------->HVH21  --------->ARR11(3) --------->AtMYB61------->GAMYB            ---------->DOF2   atgactctgcatcattgaagatttcaattagaaatccaccaatagggatacacaacagcgagagagcgttgttcaactaataaagtaatgaacatcgaga  26563800                                          <---------AHL20(2)                                          --------->AHL20(2)                                         <---------ATHB12                                         --------->ICU4                                     <------ZmHOX2a(1)                                       --------->WOX13(1)                             --------->HSFB2a(2)                                    --------->ANAC58                --------->GLK1(2) <---------HSFB2a(2)                                    --------->ANAC58            --------->MYB52(1)   <---------LBD16     --------->MYB52(1)            --------->WOX13(1)       --------->ANAC58         <---------ANAC46     <---------DOF5.7(2)        <-----------HVH21       --------->ANAC46            <---------LBD16 -   --------->DOF5.7(2)     <---------ATHB12--------->YAB1   --------->ANAC58   ----------------->AGL1   gagtcgataacggataaacaaaaatccaaatcaatgtcaagcaattaataacctatacaaacaagctaacaatctgagagttcaatttcgggaaggagca  26563900                                                                                    --------->TOE2(3)                                                                                    --------->TOE1(3)                                                                                  <---------ARR11(3)                                                                        --------->ANAC58                            --------->WOX13(1)                          --------->ANAC46  --------->YAB1                           <---------ICU4                               --------->ANAC58  <---------ICU4             <---------GLK1(2)                                          --------->ANAC55(1)        <---------------------WRI1                                      <---------ANAC55(2)       --------->ALFIN1   <---------YAB1                                --------->ANAC55(2)     <---------ANAC58     --------->ICU4                               <---------LBD16   <---------ATHB12     <---------ANAC58     <---------ATHB12                       <---------GLK1(2)--------->ARR11(3) -------->TOE2(3)<---------YAB1                         --------->AHL20(2) <---------ARR14(2)   aaccatagagtgcgagattatcaaactaatcattcaacatcaagtagcctaaactaaatttaacagagattatcacggaaccaagaccttaatcatcaaa  26564000                                                                                    <---------WRKY12                                                                                   <------ZmHOX2a(2)              --------->ANAC58                                                     ==================              --------->ANAC58                                                    --------->ARR11(3)           --------->ZAT2                                                         <---------ARR11(3)           <---------ZAT2                                                  --------->ANAC58           <---------At4g35610                                             --------->ANAC58           --------->At4g35610                                           --------->MYB52(1)       ===        --------->At4g35610                    ----------->RAV1(1)    --------->ANAC58    --------->DEAR3(1)        <---------At4g35610                   ----------->HVH21       --------->ANAC46  ------->GAMYB        <---------ZAT2                      --------->ANAC46          --------->ANAC58 --------->ANAC46    <-----------HVH21                  <-----------GT1    --------->WOX13(1)  ---------->DOF2     <--   tcgaacagtcagcagctagcaaaatcactcgatagaaatagttacctcgcgacagagcatcaatcggagaagacgaaacgaaaagatcaacgcagacgga  26564100             --------->ATHB12             ----------->GT1                                        ----           <------ZmHOX2a(2)            <---------ANAC46                           ----------->GT1      --------->CCA1(2)   <---------WOX13(1)   ---------->DOF2                    <------ZmHOX2a(1) ====HOX2a_HOX2a      <--------P     --------->ALFIN1               --------->CCA1(2)     ---------->DOF2 =================HOX2a_HOX2a   ----------->HVH21                  --------->ARR11(3)----------->GT1 ----ZmHOX2a(1)<---------WOX13(1)  <---------bZIP60(2) --------->MYB52(1)      <------ZmHOX2a(1) <---   ggaagaagagacgatcgattgatggtagattgatatgacatggtgcgaaaaaagagcaaacagagattagatatatactgaggaggagagaaaaaagaga  26564200                                                                      ------->GAMYB                                                                     ----------->HVH21                                                                     --------->MYB46(3)                                                                     <---------MYB52(2)                          ------->GAMYB <-----------GT1              --------->DEAR3(1)              <----------DOF2          <-----------GT1               <---------MYB55(2)            *TSS         <------------MYB.PH3(2)                    <--------------OsCBT      <---------HSFB2a(2)<---------MYB52(2)                     --------->ANAC46      --------->HSFB2a(2)--------->MYB46(3)                     --------->ANAC58             <------- ----->ARR14(2)        ----------->RAV1(1)                      --------->ANAC58            <-------- ------ARR14(2)     --------->ANAC46  <---------AHL20(2) <----------DOF2     <---------CCA1(2)     --   aacctcttctccaaggctttagtcgcaacaaactcttaatttaaacctcttcaccaaggctttcattcgcaacgaccgcgtatcacgctgggttttgggg  26564300                                                      ----------->RAV1(2)                                                   --------->GLK1(1)                                                   <---------At4g35610                                            --------->O2                                            --------->TGA1a              <---------ANAC58              <---------bZIP60(1)              <---------ANAC46              <---------bZIP60(2)              <---------ANAC58              <---------ANAC58             <------NtERF2                  >>>>>>>>>>HY5                                     <------           <---------DEAR3(1)               <---------O2------>ZmHOX2a(1)<----------DOF2     <------NtERF2       --------->SPL7                       <---------TGA1a           <------MYB46(1)       ---------       --------->RAP2.6(3)                  --------->bZIP60(1)       <------MYB83         <---------TCP20      --------->MYB52(1)                    <---------ANAC55(2)     <--------P             --------->PCF5      --------->ARR14(2)                    --------->ANAC55(2)    <---------MYB52(1)      <---------TCP15(1)      <---------ARR14(2)                    ========================================bZIP_DOF---------    --------->LBD16                         <---------ANAC55(1)  --------->HSFB2a(2)       --------->ATERF1(1)   --------->ANAC46                         <---------ANAC58     <---------HSFB2a(2)       --------->PCF2  <---------LBD16                           =================================MYC_MYB      ------>NtERF2 --------->MYB52(1)                         <---------ANAC46    <---------ANAC58         <---------PCF5 --LBD16  --------->At4g35610              ----------->STF1     <---------ANAC46         <---------ATERF1(1) -ANAC46--------->MYB46(3)               ----------->HVH21      <---------ANAC58       --------->At4g35610 ------->MYB46(3)  <---------YAB1        ----------->TGA1      <---------LBD16       <-----------RAV1(2)   aatcaccggaacggctgcgttttgatggggttttgtatgtttagtgacgtggcatctcctggtgtttcgggtaggcttttgtagtcatcaggggccccac  26564400                                           --------->ANAC58                                           <---------ANAC55(2)                                           --------->ANAC55(2)                                           --------->ANAC58                                           --------->ANAC55(1)                                           ----------->GT1 ---ALFIN1                          --------->YAB1                                 --------->TOE2(3) >TCP23----------->GT1             <---------ZAT6         --------->GLK1(2)  ----------->GT1 >TCP15(2)                  <---------YAB1 --------->ANAC46             --------->YAB1--------->AHL20(2)   tgtgtttattcgtaaatttgtaaacccagtctgattactgataacaagtaataaaccgagaatttttcttactatcaaactgtaaacttaaattacatgg  26564500                         <---------ANAC46                    <---------ICU4                    --------->YAB1             --------->At4g35610          ---------->DOF2<---------ANAC58                ------->TEIL       ---------->DOF2   <---------ANAC58        <---------TOE2(3)                  ---------->DOF2   <---------ZAT18  --------->ATHB12         <----------DOF2            <---------YAB1   --------->ZAT18--------->GLK1(2)   <----------DOF2------->TEIL    ------>ZmHOX2a(1) ----------->GT1   atttgtccacaaagaagcagaatcatggcttatggacgagctttctactttgatgtatgtatgtattcatccttcttattcaaatagaaaggtatatcac  26564600                                                                   <-------TEIL                                                                <---------At4g35610                                                                --------->At4g35610               <-----------GT1                                  <------MYB46(1)               --------->ANAC46                         <---------AHL20(1)                         <-       <---------AHL20(2)                               --------->ARR11(3)                         <-       --------->AHL20(2)                   <------ZmHOX2a(2)   <------MYB83             <---------ALFIN1 ----------->GT1   -------->P      <----------DOF2      <---------AHL20(2)   <---------ZAT6     -----   aaatcgaaaataaatataaacaacctctgtgaaatctctttctccgatctatctgtaatatatggcaggtccatttgaagtgttatcccaaacacctcct  26564700  Previous    Next  AGI:  At5g66480.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50910.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45854.1) Range:  from: 26561767    to: 26564212    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g66490.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50900.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45855.1) Range:  from: 26564453    to: 26564994    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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