Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <-----------GT1--------->ZAT14                                    <---------ARR11(3)                                    --------->ARR14(2)        <---------AHL20(2) ------>ZmHOX2a(1)           --------->AtMYB61      --------->ARR14(2) -------->TOE1(3)     --------->ARR14(2)      <---------AHL20(2)              <-----------HVH21 -------->TOE2(3)     <---------ARR14(2)     --------->AHL20(2)     ------->TEIL                    < --------GT1         <----------TaMYB80--------->ANAC46      --------->AHL20(2)            ------->TEIL ---DOF2           --------->YAB1   <---------ARR14(2) --------->ANAC46 <-----------GT1------->TEIL--   ttccttagcaaagtttgttaagcatattcgacctccaatatactccatataatgtatactccatataatgtatttttctccatcacatgtatgtatgtct  26551400                                                                                    <---------ALFIN1                                                                                   --------->MYB46(3)                ----------->RAV1(1)                                            --------->GLK1(1)             --------->ANAC58                                                  <---------GLK1(1)             --------->ANAC46                                                  <----------DOF2             --------->ANAC58                                              --------->ANAC58      <---------------AGL15                                                --------->ANAC46      --------------->AGL15                                             --------->ZAT14             -     ----------------->AGL2                                           --------->ZAT14               -     ----------------->AG                             ------>ZmHOX2a(1) <---------REM1(2)          --     ----------------->AGL1                          --------->TOE1(2)--------->REM1(2)  <---------MYB52(1)     ----------------->AGL3                --------->YAB1 --------->YAB1<---------ZAT14 --------->At5g28300 ---------AHL20(2)        --------->HSFB2a(2) --------->YAB1 --------->YAB1--------->ANAC58        <- ------->AHL20(2)         <---------HSFB2a(2) --------->AHL20(2)      <---------ZAT18  ----------->GT1   ataaaattccaaaataagcaacaatgttctaaaacgatgagacattaataatattcctaagaataaaaatcgtgtacacggctttcccaccgttaaatgc  26551500               <---------LBD16             <---------ARR14(2)          --------->YAB1         <------ZmHOX2a(2)                                                    --------->GLK1(2)  <---------YAB1                                                             <---------GLK1(2) -------->AHL20(2)                                                      --------->TOE2(3) -------->ATHB51                                                        <----------DOF2             < ------->ICU4--------->ARR14(2)                    <----------DOF2   <-----------GT1              <-- --------MYB52(1)                              <-----------GT1   <----------DOF2 <----------DOF2-----   cattattttcgatcatattcgggtttcaacagttcaacttgttaacaaatttccttttcaatttcatcttttaactttagattcttttcccctaatatcc  26551600              <----------ID1           ---------->DOF2     <---------TOE1(3)                      --------->DAG2     <---------YAB1                       ---------->DOF2     <---------TOE2(3)                  --------->ANAC58 ---------MYB46(3)                      --------->ANAC58                          <-------TEIL -------MYB52(1)                        --------->ANAC46                 --------->AHL20(2) ---->ATHB12--------->DAG2   ------>ZmHOX2a(1)                        ----------->GT1<---------YAB1<-   attggttaagataaaaagcacaaattccttcctataatccacaagaaaggtagaagaaaactagaaaccgagagataaaatggattcatcaatgggccta  26551700                                                               ------>ZmHOX2a(2)                                                   ------->GAMYB     <---------AHL20(2)                                                 ------>MYB83  --------->ANAC58                                                 ------>MYB46(1)     --------->AHL20(2)                                                --------->MYB52(1)  --------->ICU4                                                ----------->RAV1(1) <---------ATHB12                                         ---------->DOF2       --------->ANAC58            <---------YAB1    <---------------------WRI1<------------CBF                           -- ---------->DOF2     <----------DOF2--------->AHL20(2) --------->ATHB12      <----------DOF2  ------- --------AHL20(2)   <-----------------AGL3     --------->AtMYB61------------>CBF              <------   ttttaaagcaaattgttaatgagctttttatgggcaaatttaacaaagaccaacagaagattggatcgcaattaatgggcttttatgcataagattaagt  26551800                                                      ------->GAMYB                                                      --------->TOE2(3)                                                     --------->MYB46(3)                                                   <-----------GT1                                                   <---------ICU4               <---------GLK1(2)        <---------AHL20(2)                      --------->YAB1                  --------->ARR11(3)       --------->AHL20(2)                       <---------ICU4                  <---------ARR14(2)     ------->TEIL                              --------->ICU4               <---------At4g35610 ------->ICU4                                --------->YAB1        <---------ATHB12 -->ANAC55(2)          <---------HSFB2a(2)*TSS <---------YAB1     --------->ARR14(2)               <- ---ANAC55(2)          --------->HSFB2a(2)----------->GT1         <---------ARR14(2)         <-------   gattatgcatttaatatttgaattactagaaattaacacatactttgtaataataaccacaacttcccaatcttcttcatcagattttgctagttcgtca  26551900          <---------ANAC55(2)       <------ZmHOX2a(2)   --------->ANAC58   --------->ANAC55(2)   --------->ANAC58                                                               <---------ARR14(2)   --------->ANAC46                                                               --------->ARR14(2)   --------->ANAC55(1)     ---------->ID1                                         --------->GLK1(2)  <---------LBD16       <<<<<<<<<TBF1        ------>ZmHOX2a(2)     <---------AHL20(2) --------ALFIN1<---------At4g35610  <---------YAB1                --------->AHL20(2)     --------->ATHB12 ----HVH21--------->ANAC55(2)     <-----------GT1      <-----------GT1     ---------->DOF2   cacacacggatcatgtaatctgcttcttcttcgtttttacgatttgatcccaaagtttttcaattctataaatttgtgaaagcgaatcgtttgatttgac  26552000                                                                     ------>MYB46(1)        ------>ZmHOX2a(1)                                                                     ------>MYB83     <---------ATERF1(1)                                                                   --------->AtMYB61  --------->At4g35610                <----------DOF2<-----------TGA1                    <---------MYB111(1)------>NtERF2           <----------DOF2   <------NtERF2                  --------->ANAC58          <---------At4g35610     --------->WRKY12        <---------At4g35610            --------->ANAC58         --------->DEAR3(1)     --------->WRKY38(1)     --------->At4g35610 <<<<<<<<<TBF1  <---------ALFIN1   <---------RAP2.3(1)   ttataggttgactcttttctttggaaatggcagcgtcatcatcttctcttcttcttctccacaagcccacctacaatttccatttcgccgcttcctctgt  26552100                                                                         --------->ARR14(2)                                                                         --------->GLK1(2)                                                                     >>>>>>>>>TBF1            --------->ARR14(2)     <---------At4g35610            >>>>>>>>>TBF1            <---------ARR14(2)     --------->At4g35610      >>>>>>>>>TBF1<---------ARR14(2)       --------->TOE2(3)        <---------ANAC58       ------>ZmHOX2a(2)<---------GLK1(2)      --------->REM1(1)         <---------ANAC58<----------DOF2>>>>>>>>>TBF1               <---------   tcccacttacatcaattccgctcgatttcgaatttcgagctcaatcttccctttggatcgaagaagaagaagaagaatctggtctgtctctggctttaaa  26552200                                                                                                   <-                                                                                                   --                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------           <------MYB83                     <------ZmHOX2a(2)                                  <-----           ----------->GT1                 --------->ARR11(3)                                  <-----           <------MYB46(1)                 <---------ARR11(3)                                <------NtERF2       --------->ARR14(2)            --------->At5g28300                  --------->YAB1   <---------DEAR3(1)       <---------ARR14(2)           ----------->GT1                    <----------DOF2    <------NtERF2    ----------------->AGL1         <---------DEAR3(1)        --------->ANAC58            <-----------HVH21 -DOF2<---------RAP2.6(3)       <---------ARR14(2)           --------->ANAC58           <---------DEAR3(1)   tctatggccgatttggttaaaaccaatgctcgcagagacggtgaagatcgattccaagcgctcgagcaagaggctttcatcagtaattcgtcgtcggagc  26552300  Previous    Next  AGI:  At5g66450.1    Description:  phosphatidic acid phosphatase-related / PAP2-related. similar to phosphatidic acid phosphatase-related / PAP2-related [Arabidopsis thaliana] (TAIR:AT3G50920.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45850.1); contains InterPro domain Phosphatidic acid phosphatase type 2/haloperoxidase; (InterPro:IPR000326) Range:  from: 26551842    to: 26553271    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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