Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------ATHB12                                                                             <------ZmHOX2a(2)         --------->CCA1(2)                                               --------->SPL7        <---------ARR11(3)                                             <---------SPL7        --------->ARR11(3)     --------->YAB1                          <-----------HVH21    ---------->DOF2         --------->WOX13(1)                     <-----------GT1  ------->GAMYB            --------->AHL20(2)        ---------->DOF2<---------At5g28300 -------->At4g35610        <---------AHL20(2)   <----------ID1  --------->ARR14(2)               ---- ------->MYB52(1)    --------->ANAC46   <---------AtLEC2        <---------ARR14(2)    ---------->DOF2   tcaactgaaagatatatatgtttacacaataaatcaaaatttggatggaagggacaaaaggaagcatatataccgtccgatcatgtagaaaagagatagc  26527100                             <-----------HVH21                            --------->bZIP60(2)                                                ------                    <---------ANAC58                                                <---------ICU4                    <---------ANAC58    <----------DOF2                            <---------ATHB51               ----------->GT1      <----------DOF2                <---------DAG2  <---------AHL20(2)     --------->DEAR3(1)     --------->ANAC58             ------->TEIL              --------->AHL20(2)    --------->DEAR3(2)      --------->ANAC58      --------->AHL20(2)               --------->ICU4 ----->WOX13(1)--------->YAB1<-----------TGA1   <---------ARR11(3) <----------DOF2 <---------ATHB12   aattacaccgacgagaatagtaacttggcaacgtcatgctttcttttcaagattatatgaattttcaaactttatgttcttccaaataattagacgactt  26527200                   <---------------AtSPL8             <---------YAB1           <-----------GT1          --------->DOF5.7(2)        --------->ANAC58        --------->ANAC58        <---------TGA1a                --------->ALFIN1        --------->ANAC55(1)          <---------ANAC58        --------->O2                 <---------ANAC46        <---------O2                 <---------ANAC58                 ---------->ID1        --------->ANAC46      --------->ZAT18                <---------ICU4                       ---        --------->TGA1a <---------ANAC55(2)                  <--------HAHB4            <-----------GT1        --------->ANAC55(2)   <---------ZAT18               <---------ATHB12     <---------AHL20(2)        <---------ANAC55(2)   --------->ZAT14             --------->WOX13(1)   <----------DOF2  <----       <---------TOE1(2)--------->ANAC55(2)           <---------CCA1(2)  <----------DOF2      ------- ----------------->TaNAC69(2) <---------ZAT14    --------->GLK1(2) --------------->AtSPL8   <--------   catggctctcacgttaccatttgagtacgtagtccactagcgtggtccaaaattctatatccatcattttttgttctttttcttttattttacaatcaat  26527300                                                                                   <------------CBF                                                                                  --------->ATHB12                                                                                  <--------ATHB1                                                                                  -------->HAHB4                                                                                  <------------ATHB5                                                                                  --------->ATHB51                                                                                  <---------ICU4           ------->TEIL                                                          <---------ATHB51       <---------------AtSPL8                                                    --------->AHL20(2)       ------->TEIL                       --------->ATHB12                       <---------YAB1       --------------->AtSPL8  ------>NtERF2                                     --------->ICU4 ------>WOX13(1)              --------->ANAC58        <---------YAB1 ----------->GT1 -----ATHB12                  --------->ANAC46        <---------TOE2(3)        --------->YAB1     --- -->WOX13(1)          ---------->DOF2    <---------YAB1  --------->CCA1(2) --------->AHL20(2)     --- -ATHB12   <-------TEIL       --------->ANAC58 <---------TOE2(3)<---------ANAC46 <---------AHL20(2)   caatctatggatgtacatataagtaaaagtctacgccaattggatgattaagaattaagataagcgtcgtgaagaaataaaaaataattgggccttgggc  26527400                                                      ------>ZmHOX2a(1)                                                  ------>ZmHOX2a(2)                                                 --------->GLK1(1)                                                 <------ZmHOX2a(2)                            -------                                                <-----------ARR10            <----------DOF2 --------                                                --------->ARR11(3)     --------->ARR14(2)   ---------                                                <---------ARR11(3)     <-----------GT1      <--------                                                --------->ARR14(2)     <---------ARR14(2)   ---------                                                --------->ARR14(3)   --------->HSFB2a(1)    <--------                                                <---------ARR14(2)   <---------HSFB2a(1)    ---------                              --------->PCF2 --------->ANAC58        --------->HSFC1(2)  ----------->HVH21                             <-----------TCP11(1)<---------GLK1(1)   <---------HSFC1(2) <-----------HVH21 ------->DOF2             <------------CBF   --------->ANAC58   --------->ANAC58       ------>ZmHOX2a(1) ------>MYB52(1)       ------------>CBF --------->ZAT18*TSS     --------->ANAC58   <---------GLK1(1)   taaaggaatatttgagaagcatataaacaattggcccacaaggccacaaggatctccttcaaacgctcggaagtttccgctttggattcctgtcaccggc  26527500   <---------LBD16  <---------ANAC58               <---------ANAC58  <---------ANAC46    ------>NtERF2  <---------ANAC58   --------->DEAR3(1) -->LBD16           <----------CDC5          ---------->DOF2              --------->MYB52(1) ->DEAR3(1)         <------NtERF2<---------ANAC46                         ------>MYB83 >ATERF1(1)        ------>NtERF2 --------->ANAC55(2)                      ------>MYB46(1) -LBD16  <---------YAB1          <---------ANAC55(2)--------->ICU4       --------->MYB55(1) >DEAR3(2)--------->YAB1         <---------ANAC58   <---------YAB1      <---------MYB59 -At4g35610       <---------DEAR3(1)      --------->ANAC58              --------->AtMYB61 >At4g35610       --------->DEAR3(1)      --------->ANAC58        ---------->DOF2  --------->YAB1   gatttcgtgggatgataacgacgccgagctatatttcgtgactgaagcaaagtgatgattcttcgattgaaagaccaaacgctcatcaaaatcaattcaa  26527600                                                                            <------NtERF2                                                                           --------->LBD16                                                                          --------->DEAR3(1)                                                                         <---------LBD16                                                                       --------->DEAR3(1)                                                                       ------->GAMYB  --------->CCA1(2)                                                                      --------->DEAR3(2)                                 --------->ARR14(2)                   --------->MYB46(3)                 <---------MYB52(1)          <---------TOE1(2)     --------->ANAC58  <---------ARR14(2)                 ------>ZmHOX2a(1)--------->GLK1(2)                --------->ANAC58  --------->ARR14(2)                --------->TOE2(3)<---------ARR14(2)             ===========================HOX2a_HOX2a  --------------->AtSPL3         <---------GLK1(2)              <------ZmHOX2a(2)    --------->ARR11(1)  <---------TOE1(2)            ----------->ARR10               <-----------HVH21    <------ZmHOX2a(1)   ctcgttcgtacttatcttccttagttttccgacgagattctcactcgcaggctcggacaaaacccgatcacgaccgccggagaagaggatacgagaggga  26527700                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                                        --------->ZAT6                                                                       ------>MYB83                                                                       ------>MYB46(1)                                                                       -------->P  ------>ZmHOX2a(1)          <------ZmHOX2a(1)                               <---------ALFIN1    <---------GLK1(2)    --------->GLK1(2)                            ---------->DOF2      ----------->RAV1(1)  ----------   tgtgagaatcgaggagaagaaggaacacgatggattgtttctgtgcaagagcaaaggccaacaccttcttaccaacactagaatcctcgactccattgtt  26527800                                             <-----------HVH21        <---------GLK1(1)                 --------->ZAT2        --------->GLK1(1)                 <---------ZAT2 <---------HSFB2a(1)                      ----------->RAV1(2)                                      <- --------->At4g35610                     <---------ARR14(2)                            <---------GLK1(2) --------->HSFB2a(1)                     --------->ARR14(2)                      <---------At4g35610 --------->ZAT2                        ----------->HVH21                      <---------ZAT2<-------- <---------HSFC1(2)                   ------>ZmHOX2a(2)                       --------->At4g35610 --- --------->HSFC1(2)                  <------ZmHOX2a(2)                        <---------At4g35610---- <---------At4g35610                --------->ARR14(2)             ------->TEIL  --------->At4g35610< <---------ZAT2                     <---------ARR14(2)<---------GLK1(1)  --------->HSFB2a(2)<-------- ----------->WRI1------>NtERF2     <---------GLK1(1)  --------->GLK1(1)  <---------HSFB2a(2)<--------   cgaagctccgatatcaggccgactgatacagtcttggagatcggacctggcactggaaatctcacgatgaaacttcttgaagctgctcagaatgtcgtag  26527900                                --------->ANAC46                                --------->ANAC58                                --------->ANAC58                           --------->GLK1(2)                          <---------GLK1(2) --------RAP2.6(3)      ----------->ARR10 -ANAC58             <---------ANAC46                                             ------>ZmHOX2a(1) ------>DEAR3(1)   <---------ANAC46                                           <---------ARR14(2) ----->ATERF1(1)  <---------AtMYB61 ---------->DOF2                           --------->ARR14(2) ------NtERF2     <-----------RAV1(1)     <---------GLK1(1)               --------->At5g28300   ----- -ANAC46         --------->SPL7<---------LBD16                           ----------->GT1        <---- -ANAC58  --------->CCA1(2)<-----------ARR10  ----------->HVH21       --------->MYB52(1)  --------->ATHB12   ccgtcgagctagataagcgtatggtggagattctacgcaaaagggtttctgaccatggttttgcagataaacttacggtaaatcctgctacttcattgag  26528000  Previous    Next  AGI:  At5g66360.1    Description:  ribosomal RNA adenine dimethylase family protein. similar to dimethyladenosine transferase, putative [Arabidopsis thaliana] (TAIR:AT2G47420.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45840.1); contains InterPro domain Ribosomal RNA adenine methylase transferase; (InterPro:IPR001737) Range:  from: 26527455    to: 26528956    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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