Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      ----------->HVH21                                                                    <---------ETT(1)                                                                   --------->DEAR3(2)                                                                   --------->MYB46(3)                                                               ----------->HVH21           <---------                                                              --------->LBD16         <---------LBD16                                                              <-----------HVH21     --------->MYB46(3)                                                             <---------ANAC58     <---------DOF5.7(2)                                                             <---------ANAC58  --------->LBD16        ---------->DOF2                      <------MYB83    <---------ANAC46<---------LBD16---------   <------MYB83                              <------MYB46(1) <---------ANAC55(2)<---------MYB52(1)   <------MYB46(1)                        <---------ANAC46   --------->ANAC55(2)--------->DOF5.7(2)   ----------->GT1                  --------->ARR14(2)   --------->GLK1(1) <---------ARR14(2) ------ZmHOX2a(1)                   <---------ARR14(2)   <---------GLK1(1) --------->ARR14(2) -------TOE2(3)                     --------->MYB52(1)   <---------At4g35610 ------>ZmHOX2a(2)   <--- ------>ANAC58         xxxxxxxxxxxxxxx>smallRNA(le3)     <---------ZAT2----------------->AGL1    ---- ------>ANAC58      <------ZmHOX2a(1)  ------->GAMYB     --------->ZAT2<-----------------AGL1    <--- ---->CCA1(2)--------->CCA1(2)      <-----------GT1      --------->At4g35610<------ZmHOX2a(2)  <-----   aaggaaggttgaaagagacggaggagagggagcctgagtaaccggcttggtccagactgagctccgtgacccgacccgatccggtaacgacggagtcgca  26518800                                            ----------->HVH21                                <-----------RAV1(1)     --------->ANAC46       <---------ARR11(3)   --------->DEAR3(2)       <---------AHL20(1)  --------->PCF2            <---------AHL20(2) <---------ARR14(2)         --------->AHL20(1) --------->ARR14(2)         --------->ARR11(3)       <---------GLK1(1) --HVH21                    --------->AHL20(2)<---------LBD16 >ATERF1(1)          <---------At4g35610    ------>ZmHOX2a(2)       --------->ANAC58 ---NtERF2           --------->At4g35610  <---------ARR14(2)        --------->ANAC58 ----->At4g35610  <-----------HVH21       --------->ARR14(2)      <-----------RAV1(2)    <---------ARR14(2) ------At4g35610 <-----------RAV1(1)  <---------TOE1(2)       <---------ARR11(3)         --------->ARR14(2) ------RAV1(2)   --------->ALFIN1<-----------HVH21   --------->GLK1(1)      ----------->RAV1(2)   ---   gcggaacccacaagtgaatgtgtcgctgaatatattgtcgcagggatcgacggagaaatcccaagaactcaggcaagagcctggactcatggatttggca  26518900                                    --------->ANAC58                                    --------->ANAC58                                 --------->TGA2(2)                                 ----------->HVH21                                <-----------TGA1                               <<<<<<<<<<HY5                               --------->O2                               <---------O2                               <---------ANAC55(2)                               --------->ANAC58                               --------->ANAC55(2)                               --------->TGA1a                               <---------TGA1a                               --------->ANAC46                               ==============================================bZIP_DOF                               ======================bZIP_DOF                               --------->bZIP60(1)                               --------->ANAC55(1)                               <---------bZIP60(1)                               --------->ANAC58                               --------->bZIP60(2)                              <-----------bZIP910(1)                              <-----------bZIP911(1)                              <-----------STF1                           ------>NtERF2                           <-----------HVH21                          >>>>>>>>>AtERF-4                          >>>>>>>>>AtERF-3                               --------->At4g35610                        --------->At4g35610                        --------->DAG2                        <---------ZAT2    ---------->DOF2         ---------->DOF2                        --------->ZAT2  --------->LBD16         --------->ARR11(3)                 <----------DOF2<-----------HVH21        --------->ZAT2 ------------------------>ANAC81         <---------HSFB2a(2) <---------ALFIN1            <---------ZAT2--------->ZAT18      --------->ARR11(3)<---------At4g35610              <---------At4g35610       >>>>>>>>>TBF1 ------>MYB46(3) ========================bZIP_DOF        --------->At4g35610---------->DOF2 ---------   tccactgagttcttgaagtctttgagagctgccacgtcaccccagaaagtcttggactctgctgaagataaagtgagcaaaagaagaagaacaagggaaa  26519000                                  <---------ZAT2                                  --------->At4g35610                                  <---------At4g35610                                  --------->ZAT2                                           <---------MYB52(1)                             --------->At4g35610                                          <-------GAMYB                            ----------->ARR10                               <---------ANAC46 <-------                          <---------MYB52(1)            >>>>>>>>>TBF1<------MYB83  <---------ICU4    --------->ANAC58     <-------GAMYB    <---------ARR11(3)         <------MYB46(1)     <---------MYB46(3)    --------->ANAC58    <---------MYB46(3)--------->ARR11(3) --------->At4g35610  --------->ICU4 -->GT1       ---------->DOF2<---------At4g35610     >>>>>>>>>TBF1 --------->ALFIN1--------->YAB1   taagtgaagccattacaaaagagagatggttagctctgctgagagatgtttggaagaagaagaagcagagtgggtttggagtgaataatgaccgttggat  26519100                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                    --------->AGP1                    --------->ARR14(2)                    <---------AGP1                    <---------ARR11(3)                 <---------WOX13(1)              ----------->HVH21                                                                  <---          <---------ANAC46                                                                     ------          <---------ANAC58                                                             <---------YAB1          <---------ANAC58                                                            --------->AHL20(2)     <---------WRKY38(1)                                                          <---------RVE1(1)     <---------WRKY12--------->CCA1(2)                                           *TSS <---------AHL20(2)    --------->WRKY18(1)                                       <---------AHL20(2) <---------ARR11(3)   <-----------HVH21--------->ARR11(3)                   <------ZmHOX2a(1)     <---------TOE2(3) ---- --MYB46(3) --------->ALFIN1---------->DOF2    ---------->DOF2--------->AHL20(2) --------->ARR11(3)   gagagggtcaaggcgtgtgatagatctacagaaagttgctctgaaacttgaaagacagaggaatttatatatagagagattgagatattaaaatagatag  26519200                                                                          <--------P                                                                         <-------GAMYB                                                                       <---------AtMYB61                                                                     --------->ALFIN1                                                                     <---------ANAC46                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                   <---------bZIP60(2)                                                                   <---------ANAC58                                                      <---------ARR11(3)--------->MYB55(2)     <---------AHL20(2)                   --------->REM1(2)      <---------ZAT14  --------->ARR14(2)     --------->AHL20(2)                <---------ANAC58          --------->ZAT14  <---------ARR14(2)   --------->AHL20(2)                  <---------ANAC46     --------->ZAT14 <------MYB46(1)   ------- ------ZAT6               --------->WOX13(1)       ----------->RAV1(1) --------->ALFIN1       ------- ----->GT1          <------------CBF   <---------ANAC58     <---------ZAT14 <------MYB83  <---------MYB55(2) ------->GT1  --------->ALFIN1        <-----------------------TaNAC69(2)<---------MYB46(3)--------->MYB46(3)   tgtaaatttatatcatgtgtgtcattgtccatcagacatatgcgtgaagacaacaacatctgtacagtgaggtgtggttggccctatccccatccaccat  26519300                                    ---------->DOF2                                --------->GLK1(2)                  ----------->HVH21                     --------->GLK1(2)                      <------ZmHOX2a(1)                <------- -->YAB1  <---------YAB1 <-------GAMYB                    <---------TOE2(3)        <-----------GT1 -->AtMYB61         <---------GLK1(2)                --------->ATHB12      <-----------GT1   --------   aactcagaggttatgagttttagattctgttgagattccaaagcagaacaactcttgatttaggattatttgacatattaccaattcacatgtcataaat  26519400                                                    --------->WRKY12                                                    --------->WRKY38(1)                                                    ----------->HVH21                                             ------->TEIL                                           <---------SPL7                                          <---------bZIP60(1)                                          --------->bZIP60(1)                                          <---------ANAC55(2)                  <---------AHL20(2)      --------->ANAC55(2)                 <---------AHL20(2)       <---------ANAC46                 --------->AHL20(2)       <---------bZIP60(2)                 <---------AHL20(1)       <---------ANAC58                            <-------GAMYB         <----------DOF2                  <---------ANAC58            <-----------ARR10<--------P   -      <-----------GT1 <---------AHL20(2) --------------->AtSPL3       <---------ARR11(3)<---------MYB46(3) --AHL20(2)      --------->AHL20(1)      --------------->AtSPL8       --------->GLK1(2)<---------WOX13(1) ->AHL20(2)<-----------GT1             ----------->HVH21       ----------->GT1       <---------MYB46(3)   tgactaataaactttacaatttatttcattttctcccatatgtgacgtacccatttgaccagaagttgtcaaaatctaaactagtcttggttgatgacat  26519500                                                                                              <------                                                           <-----------RAV1(1)                <------                                                           <---------MYB46(3)                 <------             --------->YAB1                              --------->ZAT2                       <------             <---------ICU4              ----------->GT1 <---------ZAT2 --------->HSFB2a(1)   <------             -------->HAHB4          --------->ATHB12    <---------At4g35610       <------------CBF            --------->ICU4          <-------TEIL         --------->At4g35610     <---------ATHB12            <---------YAB1         <--------P        --------->ALFIN1   <---------HSFB2a(1)   <------         --------->AHL20(2) --------->ANAC58      ------->TEIL    --------->ANAC58<---------ICU4   <-       ----------->GT1      --------->ANAC58   <---------YAB1     --------->ANAC46--------->ATHB12 -- -------->CCA1(2)         <------ZmHOX2a(1)   <---------TOE2(3)   --------->ANAC58-------->ATHB1   --   agatagaagaagtaattatagccttacaggaagcaaggttgatgggttaatgaatgtgcagctgttgcaagcaaaggttccaaatcattggctctaacta  26519600                                                           <---------ANAC55(2)                                                           --------->ANAC55(2)                                                           <---------ANAC46                                                           <------MYB83                                                           <---------ANAC55(1)                                                           <------MYB46(1)                                                           <---------ANAC58                                                           <---------ANAC58                <---------PCF2                                                          --------->MYB52(2)            --------->ALFIN1                                                          --------->MYB55(2)           <-------MYC3                                                          --------->MYB59              ------->MYC3                                                          --------->MYB46(2)          <---------TGA1a                                                          <---------AtMYB61           --------->TGA1a --------->AHL20(2)                                      <---------MYB55(1)           <---------PIF3(3) ---MYB111(2)                                           <---------MYB52(1)            <---------O2 ---MYB59                                             <---------ANAC58                --------->O2 ---MYB111(1)                                   --------->ATHB12                 --------->ANAC46 ---MYB46(2)                                    --------->YAB1                   --------->ANAC58 ------MYB.PH3(2)                              <---------ATHB12                  --------->ANAC58 ---MYB52(2)                               <------ZmHOX2a(2)                  --------->TOE2(3) ---------DOF2                      --------->ATHB12  <---------ANAC58        --------->TOE2(2) ------->TOE1(3)            <-------TEIL <------ZmHOX2a(1)--------->MYB111(1) --------->TOE1(2) ------->TOE2(3)<----------ID1     <---------YAB1     <---------ZAT6          --------->TOE1(3)     <   actttaaatctatggaagacgacgaaaatgttcatatatgataggatcactcattagcgttaggtgtctaaaactctaaacctaagccatgtgggacact  26519700  Previous    Next  AGI:  At5g66330.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G15320.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73589.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 26517628    to: 26519181    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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