Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------ANAC55(2)                                                                                --------->TGA1a                                                                                ----------->RAV1(2)                                                                                <---------ZAT2                                                                                <---------TGA1a                                                                                --------->O2                                                                                <---------O2                                                                                --------->ZAT2                                                                                --------->At4g35610                                                       <---------MYB46(3)       <---------At4g35610                                                      <---------DEAR3(1)    <-----------HVH21                                                      --------->ALFIN1     --------->bZIP60(1)                                                      <---------AtMYB61    <---------bZIP60(1)                                                   <-----------RAV1(1)  ====================RAV                                             --------->TOE2(3)       <---------ARR14(2)                                             <---------------AGL15   --------->ARR14(2)                                             <----------DOF2         --------->GLK1(2)   <---------ZAT14                      ------>ZmHOX2a(1)<---------WRKY18(1)------>NtERF2 <-----------RAV1(1)  --------        --------->MYB46(3) <---------ANAC46  =============================================bZIP_DOF   tttgttgacaacaatcccttcttcctgtttcttagactccttgactactttaactggtggtgcctcggtagtatctgttgtcacctgagccttcactgac  26470000                                                                    --------->CCA1(2)                                                                    <------ZmHOX2a(2)                                      --------->ANAC58             <---------ARR11(3)                                      --------->ANAC58             --------->ARR14(2)                                <---------At4g35610                <---------ARR14(2)                    --------->ZAT14<-------TEIL                    --------->ARR11(3)               <                    <---------ZAT14<---------ZAT18         ------->TEIL                      --------                  <---------ZAT14  --------->ZAT18        <---------AtLEC2                   --------                  <---------ZAT18<-------PIF5        <---------ATHB51                    <---------AHL20(2)       <---------HSFB2a(2)      --------->At4g35610  --------->ICU4--------->AGP1       <---------WOX13(1)       --------->HSFB2a(2)    <-----------RAV1(2)    <---------ATHB12                 --------->ATHB12   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->ANAC46  <---------YAB1        <---------YAB1 <------- --->HVH21        --------->ZAT14------->PIF5      --------->WOX13(1)     <----------DOF2--------->AHL20(2)   acaactcttctgtaacacactgtgctctgtatgcaggtgcacgagataaatagcaattatgcatgtcaagatccagctttacaattagtgattaattaaa  26470100                                                          <-------TEIL                                               ------>ZmHOX2a(1)                                    -                                               <----------DOF2                                      <                                           <---------ARR14(2)       --------->GLK1(2)               <                                           --------->GLK1(2)       --------->ARR11(3)              --       --------->ANAC46                    <---------ARR11(3)      <---------ARR11(3)     <---------ANAC46       --------->ANAC58                    --------->ARR11(3)    ----------->ARR10        <---------ANAC58 ---------YAB1                       <---------TOE2(3)   --------->CCA1(2)                <---------bZIP60(2) ->AHL20(2)                    <---------------AGL15    <---------ARR14(2)                <---------ANAC58 ->YAB1--------->ANAC58    <-----------GT1 --------->ARR14(2)   <------ZmHOX2a(1)    <------ZmHOX2a(1) --AHL20(2)              --------->YAB1<------ZmHOX2a(1)--------->ARR14(2)    <------ZmHOX2a(1)  <---   acatgataaacgaaatggaaatggaaatgataccttcttgaggaaaatcctttgaggggatacagaggagattttggtgaggagagaggatgacttggag  26470200                             --------->RAP2.6(2)                           --------->ZAT2                                                 --------->AHL20(1)            <---------ZAT14<---------At4g35610                                            --------->AHL20(2)            --------->At4g35610                                                          --------->YAB1   ---------->DOF2         --------->At4g35610                                ---------->DOF2 ---------->GT1      ---------->DOF2                                        <------ZmHOX2a(2) ------MYB83--------->ZAT14<---------ZAT2   --------->At4g35610            <---------ARR11(3)   ----- ------MYB46(1) <---------ALFIN1     <--------P >>>>>>>>>TBF1              --------->ARR11(3)   ----- ------->MYB59 <---------At4g35610 --------->ATHB12>>>>>>>>>TBF1  ----------->HVH21    --------->AHL20(2) ---ZmHOX2a(1)----------->RAV1(1)  <---------MYB46(3) >>>>>>>>>TBF1       --------->GLK1(1) ---------   gaaggtaaagagactgcagcacttatagcagcagccatggttgatcagaagaagaagaagaagatgaactgatgggagatcaaagtcaaaaaaataataa  26470300                                                                            ----------->HVH21                                                                          <---------ANAC58                                                                          <---------ANAC58                                                                      <---------ANAC58                                      --------->CCA1(2)        --------->ALFIN1                                     <---------ARR11(3)        <---------ANAC46                          <---------GLK1(2)                    <---------ANAC58           --------->ARR11(3)  <---------ANAC58                <---------ANAC58           <---------ARR11(3)  <---------LBD16        --------->ATHB12<---------ANAC46            <-- ---->ANAC58  ---------->DOF2  <---------ANAC58      <---------YAB1   <---------ANAC58  --------->ALFIN1 ---->ANAC58<------ZmHOX2a(2) <---------LBD16  <---------TOE2(3) --------->ALFIN1      <-----------HVH21 >YAB1 ---------->DOF2---------->DOF2--------->ARR11(3) <---------WOX13(1)<---------ANAC46  ------>NtERF2   gcaaaaaaaaaaagatcaaagaaaaaaagattagcgggagatatatgatgaggttgtgattggatgtgtgtggattgtgtgaagggcaatgtgaggccaa  26470400                                    ------>ZmHOX2a(1)                                   <---------MYB59                            <---------ICU4                  <---------MYB46(3)                            --------->ATHB12           ----------->RAV1(2)                            --------->YAB1            ------->TEIL                      <---------At4g35610 <-----------GT1 <-------GAMYB         --------->TOE2(3)   -        <------ZmHOX2a(1)*TSS<------------CBF <----------DOF2                  --------->REM1(1) <--- -------ZAT6----------->GT1<---------YAB1<-----------GT1 <-----------RAV1(1) ------>ZmHOX2a(1)   ----   gtgttagagaggataagttatttctgcttatcattgtcctaatttagcctttcatgcgcctgttgttcacatttcagtcctacatcaaaaaaaaaactgt  26470500                         <-----------GT1                      --------->MYB52(2)                      --------->MYB111(1)                      --------->MYB46(2)                      --------->MYB111(2)                      <---------MYB46(3)        <---------At4g35610                     --------->ANAC58     <-------TEIL    <--------P                 --------->ANAC58 -------->ANAC46    <---------MYB52(1)--------->MYB52(1) ------ZAT18   --------->GLK1(2)   <---------STY1(2)      --------->ATHB12 ----->ZAT14------------>CBF       --------->STY1(2) --------->ICU4   tcacacatccatctcacaatctggtagttactgggctagctaatgggctcaagcacttattgatgggcctcttatgacatctattttgacatggagtcat  26470600                   <---------ANAC58                   <---------ANAC58                                                 ---------->DOF2                <----------DOF2                      <---------ZAT18    --------->ANAC55(1)               <---------DAG2                        <---------At4g35610--------->ANAC58            <            <-----------GT1    ---------->DOF2    ---------->DOF2       --------->ANAC58          ---     <---------ALFIN1  ---------->ID1         <-------TEIL              --------->ANAC46  --------->At4g35610   ccctccctcacttgttacctttcttgttgtcttcaaagtttacacacatacatagagctctcatcccaaattacacgaaatagttcaaaagaagctcaaa  26470700                             --------->GLK1(2)                      --------->CCA1(2)                     --------->ARR14(2)                     <---------ARR14(2)                 <---------At4g35610         <------ZmHOX2a(2)      --------->ARR11(3)     ------->TEIL   --------->ARR11(3)     --------->YAB1  <---------ARR11(3)     <---------ARR11(3)                     <----------DOF2    <---------ATHB12 --------->ARR11(3) ---------->DOF2                      ---------->DOF2 ---------YAB1   <---------ZAT14   --------->ZAT14                    --------->DAG2               <- ------>YAB1     --------->ZAT14   <---------ZAT14                   ---------->DOF2            <----   taatcaatgatatcgtctctgcagatatatgaatctgtacagaaaagatcagccagagaaattcaactacaaaaagctcaaaagcctttttgtttttgat  26470800                                              --------->ANAC46                                              --------->ANAC55(2)                                              --------->ANAC58                                              --------->ANAC58                                          <-----------HVH21                                      <---------At4g35610       --------->YAB1                                     --------->MYB52(2)         <---------ICU4        --------->DAG2              --------->SPL7             --------->ICU4                    ----       ---------->DOF2   <---------ARR11(3)   <---------ANAC55(2)    ------->TEIL              ====== <---------LBD16  --------->ANAC46<---------SPL7               <---------ATHB51                ------ --------REM1(2)--------->ANAC46 <---------ANAC58         ----------->GT1                    <------- -----WOX13(1)<-----------GT1    <---------ANAC58   --------->YAB1<---------YAB1    <-----------GT1<-   ttacacgggtaaagtattacacaacaaggtattctgcgttcgctggtcacgaaatcaaaatcgaaataatgaatcaattgaaattgtaaccccttgatcc  26470900  Previous    Next  AGI:  At5g66190.1    Description:  ATLFNR1 (LEAF FNR 1); NADPH dehydrogenase/ electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis/ electron transporter, transferring electrons within the noncyclic electron transport pathway of photosy. similar to ATLFNR2 (LEAF FNR 2), NADPH dehydrogenase/ oxidoreductase/ poly(U) binding [Arabidopsis thaliana] (TAIR:AT1G20020.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96401.1); contains InterPro domain Ferredoxin Reductase (InterPro:IPR015701); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709); contains InterPr Range:  from: 26468190    to: 26470425    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g66200.1    Description:  armadillo/beta-catenin repeat family protein. similar to armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G36030.1); similar to armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G34940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60484.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77454.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48208.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 26470686    to: 26473048    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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