Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <------NtERF2                                        <---------MYB46(3)                                       --------->ALFIN1                                      --------->ATERF1(1)                                     <------MYB46(1)                                     <------MYB83                                     <---------bZIP60(2)                                     <---------ZAT2                                     --------->ZAT2              --------->At4g35610                                --------->ALFIN1                 <---------At4g35610                               --------->TOE1(2)                 --------->ZAT2                               <-------MYC3                 <------ZmHOX2a(2)              --------->ATERF1(1)                               --------->TOE2(2)            ===================================HOX2a_HOX2a                               ------->MYC3                 ================================HOX2a_HOX2a                              <---------TGA1a         <---------ANAC58                   --------->ALFIN1                   ---------->DOF2  --------->MYB111(1)  <---------MYB46(3)             <------ZmHOX2a(1)                   =====================bZIP_DOF      <---------ANAC58          --------->ANAC46                 --------->ANAC46   --------->MYB111(2) --------->ALFIN1        --------->ANAC58                 --------->ANAC58   <---------DEAR3(1)<---------ANAC46          --------->ANAC58                 --------->ANAC58   <---------AtMYB61<---------MYB46(3)        <---------LBD16   ----          <---------ZAT6      --------->O2        <---------ANAC46           <---------REM1(2)   <---   <---------AHL20(2)         --------->TGA1a     <---------ANAC58        <---------ATHB12 <------ZmHOX2a(1)   --------->AHL20(2)         <---------O2        <---------ANAC58 <----------DOF2   <------ZmHOX2a(1) ---TEIL  ----------->GT1     ================================================bZIP_DOF--------->ALFIN1   cataaaaaaatagggttacaagaaagtgagaaacgtgggaggtggctacttggcttgggtggatcacagctttcccatcaacacggaggaggaggagcca  26465800                    --------->GLK1(2)                    --------->ARR14(1)                   --------->ARR14(2)                   <---------GLK1(2)                   <---------ARR14(2)                   --------->ARR11(3)             --------->TOE1(3)             --------->YAB1             --------->TOE2(3)                                                    <---------AHL20(2)          --------->YAB1                                               <---------ICU4       --------->YAB1                                                  <--------HAHB4      <---------AHL20(2)                                               --------->YAB1           <----      --------->AHL20(2)                        <-----------GT1       <---------YAB1            <----     --------->AHL20(2)     <----------DOF2--------->AHL20(2)         <---------ATHB12          <---- ----->At4g35610 ----------->ARR10    --------->AHL20(2)      <---------REM1(1)  --------->AHL20(2) ------At4g35610 <---------YAB1 --------->TOE2(3)  ------->GAMYB      --------->ICU4         <-------   tctgctaattaataatcttaagattctcttcttttcttaatcaaataatataactgcctgtgtgatgtagtaatcattttcaatttaaaattccagtttc  26465900                      ------>MYB46(1)                      ------>MYB83              --------------->AtSPL8    --------->YAB1  <---------MYB59                                                    ----------->GT1 -----ANAC58 <---------ANAC58                                                       --------->DAG2 -----ANAC58 <---------ANAC58  ---------->DOF2                                 --------->ANAC58 -----ANAC46 <---------ANAC46 --------->YAB1             >>>>>>>>>MYB2         --------->ANAC58 --GLK1(2)<----------DOF2--------->AHL20(2) --------------->AGL15   ---------->DOF2---------->DOF2   ttgtaatcaaaactttcgtgtaccaaattcaataaaagctgtgtttctctataagtgaaaaccaaaaaaaaaaagatgaacaagtaaaagtgtaaaaact  26466000               --------->MYB52(2)         <----------DOF2   <---------WRKY38(1)    <---------ARR14(2)                              ---         --------------------->WRI1      <----------DOF2                                 <---------ARR11(3)     --------->ANAC58     --------->WRKY18(1)     <---------ZAT14                        <-----------ARR10     --------->ANAC58    <--------ZAP1   <---------DAG2     ---------->DOF2             <---------CCA1(2) <-----------GT1         <-----------HVH21     <---------ANAC46   <----------DOF2      <---------MYB52(1)   aagtaacaagcctttgtttgtttcatcggtcaaaacgtttgggctttttgagtatacatacaaaaaggctttgggcttcagcctaagcccttatcttctc  26466100                                           --------->ZAT6                                           <---------ALFIN1                                         ------>MYB46(1)                                            <                   ------>NtERF2         ------>MYB83                                               -            --------->ARR14(2)         <---------MYB59                                          <----            <---------GLK1(2)      <---------ETT(1)                                          --------            <---------ARR14(2)  ----------------------->TaNAC69(2)                        --------->ANAC58         <------NtERF2      <---------AHL20(2)                                     <---------HSFC1(2)        --------->LBD16    <---------AHL20(2)                                      --------->HSFC1(2)       <---------DEAR3(1)  <---------AHL20(1)                       <---------GLK1(1)     --------->ANAC58      <---------LBD16      --------->AHL20(2)                   *TSS--------->GLK1(1)     --------->ANAC46 ------>ZAT14--------->GLK1(2)  <-----------GT1--------->ZAT14 <---------LBD16     <-----------------   tgttctcgcccggcgattctccgacttaattaattttccgaccgaacacttctctctctctctctctcgggtttctcatggaagaaacgtccaagctaca  26466200                                                                                      ----------->GT1                                                                                     <---------TOE1(3)              ------>ZmHOX2a(1)                                                      <---------TOE2(3)              ====================================HOX2a_HOX2a                 <---------MYB52(1)   --------->LBD16                                                          --------->ANAC58 <---------LBD16       --------->HSFB2a(2)                         <-------TEIL  <---------ANAC55(2) ---------At5g28300    <---------HSFB2a(2)                        --------->GLK1(2)  --------->MYB59 -------->MYB52(1)     <---------HSFC1(1)                 --------->MYB52(1)--------->ANAC58 -----ZAT6   --------->TOE2(3)               ------>ZmHOX2a(1)  --------->GLK1(1)--------->ANAC55(2) ---->AtMYB77--------->TOE1(3)             ------>ZmHOX2a(2) --------->LBD16--------->ANAC46 ------TaNAC69(2)  <----------DOF2       <---------ARR11(3)<---------LBD16  --------->bZIP60(2)   gttaccggagagtttccttagctttctagaggcgaatggccttgatccttcaatctatactcacggagattcaattccacgttatgtaaggtaacttgag  26466300                        <-----------------AGL2                                        <----------DOF2          <---------DAG2<-----------------AG--------->LBD16                          <---------ANAC58          <----------DOF2                 <---------LBD16   <---------TOE1(3)    <------ZmHOX2a(1)         <---------ANAC58--------------->AGL15              <---------TOE2(3)  <---------------------WRI1         <---------ANAC58<---------------AGL15         <---------MYB52(1) --------->ARR14(2)     <----------DOF2    <-----------------AGL3      <-------TEIL          <---------ARR14(2) <---------ALFIN1       <-----------------AGL1  <---------AtMYB61     <---------LBD16<---------ANAC58   acccctcctttgcttttctcaaaatttctgaatttggcattgaaaccggagaggtccgtttgaaggttgaaacctggattcgaggatgctttcgaagaga  26466400                 --------->ZAT14                 <---------ZAT14             --------->ZAT6           <-----------GT1                          --------->ANAC46           --------->MYB52(1)                     <-----------GT1     <-------TEIL          --------->AHL20(2)                  <---------ARR11(3)  <---------ARR11(3)                -     --------->LBD16                <---------MYB46(3)         <-----------RAV1(2)                  - --------->ARR14(2)         ----------->GT1  <------ZmHOX2a(1) <---------HSFB2a(2)              ----- <---------ARR14(2)        --------->DAG2 <---------LBD16      --------->HSFB2a(2)             ------   ttgaatccgaaattaactgtaaactggagaaggtgaattggttaccaggattttactccatccctccagatgttcatatagccagaaccaaggcctatca  26466500                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              <------                                                                                            <--------                               ------>MYB83                                               <----------                               ------>MYB46(1)                                           <----------- -------->ANAC58               -------->P                                                --------->At4g35610 -------->ANAC58      --------->AHL20(2)                       --------->TOE2(3)       <-----------RAV1(2) ---->ANAC46         <---------ATHB12                       <-----------GT1    <---------LBD16------- --->YAB1          --------->WOX13(1) ------>ZmHOX2a(1)  --------->TOE2(3)<----------DOF2<---------At4g35610   gcaaggcatggtgagagagagcaatcaaataccaactctcctctcgctcattcggtttttcttaacctcacttgttctttcttcgggtttcagatgtacg  26466600                    <---------At4g35610                    ------>NtERF2                  --------->ATERF1(1)                  <------NtERF2                  <---------RAP2.6(2)                  --------->RAP2.3(1)                                  <---------At4g35610                 --------->ABI4(2)                                    ===================RAV                 <---------ATERF1(1)                                  <-----------RAV1(1)                 ------>NtERF2                                    <----------DOF2        --------->At4g35610                                    --------->ARR11(3)        <---------At4g35610                                    <---------ARR11(3)        --------->ZAT2                                         <---------ARR14(2) --->ANAC46     --------->ARR14(2)                        <---------ANAC58 --->ANAC55(2)  --------->ALFIN1                          <---------ANAC46     ------>ZmHOX2a(1) --->ANAC58     <---------DEAR3(1)                        <---------ANAC58<---------At4g35610 --->ANAC58   <---------At4g35610             --------->LBD16  --------->ARR14(2)         <---------- ---LBD16  --------->MYB52(1)<---------At4g35610<------ZmHOX2a(1)=====================HOX2a_HOX2a -SPL7  <---------ZAT2 <-----------HVH21     <---------LBD16   <---------AGP1----------->RAV1(2)   <- -----AtSPL3<---------LBD16  --------->At4g35610========================HOX2a_HOX2a   --------->AHL20(2) -------SPL14 --------->LBD16<---------ZAT2  <-----------RAV1(2) ------>ZmHOX2a(2)    <---------AHL20(2) >TEIL ------->TEIL --------->At4g35610     --------->LBD16   <---------CCA1(2)--------->LBD16  -----   gaatcgatgcagcttccggtgccgctgtctcagctcttggtatctccccaggagaccatgtcttggatctttgtgctgctcctggtatttttttacattg  26466700  Previous    Next  AGI:  At5g66170.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G17850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48196.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763) Range:  from: 26464874    to: 26465953    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g66180.1    Description:  similar to NOL1/NOP2/sun family protein [Arabidopsis thaliana] (TAIR:AT1G06560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48200.1); contains InterPro domain Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678) Range:  from: 26466164    to: 26468380    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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