Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <------MYB83                                                                     <------MYB46(1)                                                                    <---------TOE2(3)                                                                    --------->MYB59                                                               --------->AHL20(1)                                                               <---------AHL20(1)                                                               --------->AHL20(2)                                                            <---------ICU4                                                            <--------ATHB1                                                            --------->YAB1                                                            <--------HAHB4                                                            -------->HAHB4                                                            --------->ATHB51                                                           --------->ICU4          --------->TOE2(3)< <----------DOF2                     <------------CBF      <---------YAB1       --------->YAB1      - ------DEAR3(2)           <---------At5g28300  <-----------GT1 <---------AHL20(2)  --------->YAB1   - ----MYB52(1)            <-----------GT1 <---------YAB1    <---------ATHB51  --------->YAB1         < -----HVH21       <------------CBF   <---------GLK1(2)--------->ANAC55(2)  ------------>CBF  ------>ZmHOX2a(1)   ggtctttgttagagtctctctattgttttactgtgactagattgtcatttcaccatatgtaataattaattaggttctacaataatcttattttcctaca  26461900                 ----------------->AGL3                 ----------------->AGL2              <---------WRKY18(1)           <---------ICU4         --------->ARR11(3)         <---------ARR11(3)      <---------AHL20(2)      --------->AHL20(2)              --------->ARR11(3)     --------->YAB1                   <---------ARR11(3)     <---------AHL20(2)             <---------AHL20(2)     --------->AHL20(2)            --------->AHL20(2) --------->AHL20(2)           <---------DAG2                                 <---------TOE2(3) <---------AHL20(2)           <----------DOF2                          <---------YAB1 ---------AHL20(1)      <---------------AtSPL8                        --------->AHL20(2) -------->AHL20(1)      --------------->AtSPL8                     --------->TOE2(3) ------>ZmHOX2a(2) -------->AHL20(2)--------------->AGL15                <----------DOF2<---------AHL20(2) ---------AHL20(2)<---------------AGL15  <----------DOF2         --------->ICU4    <---------AGP1   aatttaattaaaatcttgaccctaaaatagtactttattaaatctttttttcttctactttgatgtcaacattaaaattgaagttgatctgttttgagtt  26462000                            <---------AHL20(1)                            --------->AHL20(2)                            <---------AHL20(2)                            --------->AHL20(1)                           --------->AHL20(2)                        --------->YAB1                       <---------AHL20(2)                         <----------DOF2              <-----                       --------->AHL20(2)                     <----------DOF2                  ------                     --------->TOE2(3)                 <---------ARR11(3)                <---------YAB1                <----------DOF2                        <-----------ARR10               --------->YAB1               <---------DAG2     <-----------GT1      --------->ARR11(3)             <---------ATHB12            <-----------GT1<---------AHL20(2)         --------->CCA1(1)             --------->WOX13(1)     --------->YAB1  <----------DOF2                  --------->RVE1(1)           <---------ATHB12---   ttgacaatagtcatttaccttttctttaattttatttaacaaatagttttgggaaaaaatctccctttctttgataatacacaaatcaatcaatatagag  26462100         --------->ANAC58         --------->ANAC58         <---------O2                    <---------At4g35610         --------->O2            --------->GLK1(2)         ===============bZIP_DOF <---------ARR14(2)                         --------->ANAC46         --------->ANAC46        <---------ARR11(1)                         --------->ANAC58         --------->TGA1a         --------->ARR14(2)                    --------->MYB46(3)    <-----------GT1              <---------ARR11(3)               --------->TOE2(3)  <---------AHL20(2)             --------->ARR11(3)             --------->ARR11(3)  --------->AHL20(2)            <---------CCA1(2)               <---------ARR11(3)      <---------ICU4 ----ZAT6--------->bZIP60(2)    <---------ARR14(1)           <---------AHL20(2)         --------->ATHB12 ----->GT1                  --------->ANAC58   <-----------GT1 --------->RVE1(1)       <---------YAB1 ------>ICU4 <----------DOF2--------->ANAC58----------->GT1 --------->YAB1  --------->ANAC58   <-----   ataattaaaccacgtctttacagagaatagaagcaaatctttgagctagtaacattttagtataaaaatctcaacaacaagtcatttacatcattgcaac  26462200                                 <---------ANAC58                                 <---------ANAC46                                 <---------ANAC58                                       --------->AHL20(2)                             <---------ANAC58                             --------->ANAC55(2)                             <---------ANAC58                             <---------ANAC58                          <--------P                                      <---------ANAC58                         <-------GAMYB                                    <---------ANAC46      -----                        <---------MYB46(3)                  <---------DEAR3(1)   --------->AHL20(2)                      <---------ANAC46                   --------->ANAC46 <---------ANAC55(1) <------                    --------->ALFIN1                    --------->SPL7 <-----------GT1 --------->AHL20(2)           --------->ATHB12<---------MYB46(3)       <---------------AtSPL8<---------ANAC55(2)<-------    ---------->ID1<---------ANAC58             <----------DOF2<------NtERF2--------->LBD16   -------- ----At4g35610    <---------ANAC58    ---------->DOF2   ------->TEIL<---------YAB1     <---------AHL20(2)   tgttttgttctcttcatttgacttgggggttgtttgcttgcaaaggaggctttgtttgtacgtcgtcgtttttattccgtatataaaatataaattaacg  26462300                                                                  <------NtERF2                                                                  --------->ATERF1(1)                                                                 =================RAV                                                                 ----------->RAV1(1)                                                                 <---------ATERF1(1)                                                                 ------>NtERF2                                                                --------->ETT(2)     <----------DOF2                                            ----------->HVH21    <---------ICU4            <---------HSFC1(2)              <---------RAP2.3(1)            -------- -->GAMYB                     --------->HSFB2a(1)          <---------ARR14(2)      --------->ANAC58 ---TOE2(3)   ----------->RAV1(2)                          --------->ARR14(2)      --------->ANAC58 ----GT1---------->DOF2       --------->HSFC1(2)         ------->TEIL            ---------->DOF2 ->MYB52(1) *TSS              <---------HSFB2a(1) --------->MYB46(3)  ----------->RAV1(2)    <-------   aactaatctttaaagcctctgagacgagtagaaggttctctctggtgaagaaaccaatgcatttcggcgacagcctgaaactgaaaagccatcgatcgac  26462400                                                                                              <------                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                <---------ANAC55(1)        ---------->DOF2                                 <---------ZAT2          <---------ANAC55(2)     <----------ID1                                     --------->At4g35610     --------->ANAC55(2)  --------->DAG2                                        --------->ZAT2 ------>ZmHOX2a(1)   --------->ANAC46 ---------->DOF2                            <---------ETT(2)     <-----------GT1<---------ANAC58 ->ETT(2)                              <---------At4g35610   <----------DOF2    <---------ANAC58  --- --ETT(2)          --------->CCA1(2)   --------->ZAT2   <---------At4g35610  <---------MYB52(1)  <---   cgagaaagcgaaaagagagagagatgagactcgtcgtctcaagctgtctactagttgcagctccttttctctcctctctgttacgagtctcactcgccac  26462500                                                 <------MYB46(1)                                                 ----------->GT1                                                 <------MYB83                                                --------->MYB59                                             <---------ARR14(2)                                             --------->ARR14(2)                                          <---------------AGL15                                          --------------->AGL15                                         <-----------------AG                                         <-----------------AGL3                                         <-----------------AGL2                                         ----------------->AG                                         ----------------->AGL3                                         ----------------->AGL1                                 <---------GLK1(1)                                 <------ZmHOX2a(2)                   ------>NtERF2--------->ARR14(2)                   --------->LBD16       ----------------->AGL2                     --------->LBD16                  --------->ANAC46------>ZmHOX2a(2)                           ------>ZmHOX2a(1)     ===================================HOX2a_HOX2a<<<<<<<<<<WRKY26          --------->TOE2(3) ------     ====================================HOX2a_HOX2a                        ----------------->AGL1     ------>ZmHOX2a(1)  <----------DOF2  <-----------------AGL1 <---------ALFIN1   --------->ANAC46 ---ALFIN1        --------->DEAR3(1)   --------->ANAC46   <-----------GT1  ---------->ID1      <----- ------>ZAT14  --------->ARR14(2)--------->GLK1(1) <<<<<<<<<<WRKY38    <----------DOF2         <----- --------RAV1(1) <---------LBD16<---------ARR14(2) <<<<<<<<<<WRKY43    <---------DAG2          ------   tgttgtcctcaattccatctccgcctcttttgccgatctcccagccaaatttggtcaatttctccccctcttcctttttccttatccgaaacaatttctc  26462600                                                                                                 <---                                                                                                <----                                                     --------->MYB52(1)                        <-----                                                 <---------------AGL15                         <-----                                                 --------------->AGL15                     --------->ETT(2)                                                ----------------->AGL2                     <---------ETT(2)                                                <-----------------AGL1                    --------->HSFB2a(2)                                                ----------------->AGL3                ------>ZmHOX2a(2)                                                ----------------->AGL1               <------ZmHOX2a(2)                                            --------->LBD16                         <---------ARR14(2)                                           <---------ANAC55(2)                      --------->ARR11(3)                                           <---------ANAC46                         --------->ARR14(2)                                           <---------ANAC58                         <-----------ARR10                                           <---------ANAC58                         --------->ARR14(3)                                           --------->ANAC55(2)                      <---------GLK1(2)                                          <------NtERF2                             <---------ARR11(3)                                         ------>NtERF2 --------->ANAC46             <---------ARR14(3)                                        <---------ARR14(2)          --------->At4g35610   <---------HSFB2a(2)                                       --------->ATERF1(1)          <---------At4g35610 ------>ZmHOX2a(1)            ---------->DOF2           <---------RAP2.3(1)  <---------ARR14(2)       --------->AGP1 --      ----------->GT1                 <---------ATERF1(1)  --------->ARR14(2)      --------->GLK1(1)<  --------->GLK1(2)                  <---------RAP2.3(3)   --------->GLK1(2)       <---------GLK1(1)< --->HSFB2a(2)                       <---------DEAR3(1)--------->ANAC58            <---------At4g35610 ----HSFB2a(2)                      --------->RAP2.6(3)--------->ANAC58      <-----------HVH21<------ ----HSFC1(1)               <---------GLK1(2)----------->HVH21  --------->ALFIN1  ----------->ARR10<- --->HSFC1(1)             <---------YAB1--------->ARR14(2)<---------GLK1(2) --------->ANAC46---------   gaacaatctggttaaaaagaagttgattttgattctcagacggctccgtgaccaaaaacggaatctgtggagctctatacgtcgcagatcctctcgacgg  26462700                      <------NtERF2                      ------>NtERF2                      <---------ATERF1(1)                     --------->RRTF1(2)                     --------->RAP2.6(2)                     --------->RAP2.3(2)                     --------->DEAR3(1)                    --------->ATERF1(1)                    <------NtERF2                    --------->DEAR4(2)                    --------->RAP2.3(1)                    --------->RRTF1(1)                   ------>NtERF2                   <---------ATERF1(1)                   --------->ABI4(1)                  <---------DEAR3(1)                  --------->RAP2.3(3)                  --------->ANAC46                 --------->ATERF1(1)                 --------->RRTF1(1)                 --------->ORA47(2)                 --------->ERF1                                                             <--------                 --------->DEAR4(2)                                                         ---------                 --------->RAP2.6(1)                                                       <------ZmHOX2a(1)                 --------->RAP2.3(1)                                                     <---------TOE2(3) -----P        --------->ANAC46                                                          <---------TOE1(3) ---GAMYB      --------->O2                                                     --------->KAN4(2) ----MYB46(3)  --------->ANAC58                                                <---------KAN4(1) ----DEAR3(2)  --------->ANAC58              --------->AGP1                    --------->KAN4(1)----- ------->At4g35610--------->RAP2.3(2)     --------->ANAC46                     <---------HSFB2a(1) ---------ANAC58------>NtERF2           <---------ALFIN1             --------->YAB1 <----------DOF2 ---------ANAC58<---------ATERF1(1)--------->ANAC58            --------->YAB1  --------->HSFC1(2) ---DEAR3(1) <---------ALFIN1      --------->ANAC46     --------->ZAT18        <---------HSFC1(2) --------At4g35610--------->DEAR3(1)  ----------->RAV1(1)   <----------DOF2    --------->HSFB2a(1) -- --->AtMYB77<---------REM1(2)      --------->ANAC58     <---------ZAT18       <---------KAN4(2) <----   ttgctcaccgcttctccacgccgccgcatccaactggacgcaacacagaactactaagttcgctttgataatcagaggcgaatgttcttttgaggataag  26462800  Previous    Next  AGI:  At5g66160.1    Description:  JR700 (Arabidopsis thaliana receptor homology region transmembrane domain ring H2 motif protein 1); peptidase/ protein binding / zinc ion binding. similar to protease-associated zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G71980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48199.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 26462312    to: 26464659    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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