Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->GLK1(2)                                                                       <---------ARR14(2)                                                                       <---------GLK1(2)                                                                       --------->ARR14(2)                                                                      <---------At4g35610                                                                --------->At4g35610                                 <------ZmHOX2a(1)              <---------ZAT2 <---------AHL20(2)           --------->MYB46(3)  --------->MYB59                  --------->ZAT2--------->AHL20(2)      ----------->GT1        --------->ICU4    --------->YAB1   <---------At4g35610  ---------->DOF2       --------->YAB1    <-------TEIL        <-----------RAV1(2)   ttagaaaagagtaacaactgagacaatcgcaattaggaacaaggttcaattttaaacaagggtttcagctgcagattccattaaatagggaacaagacca  26455600                                                            ------>ZmHOX2a(2)                                                           <------ZmHOX2a(2)                                                          <---------ARR14(2)                                                          <---------ARR11(3)                                                          --------->ARR14(2)                                                      --------->YAB1                          ------>NtERF2                                                     <---------ZAT2                      <---------WOX13(1)                                     --------->At4g35610 <------ZmHOX2a(1)             --------->ATHB12                                 --------->ANAC58    --------->ZAT2                  <---------MYB52(1)                            <---------WRKY38(1)     --------->ANAC58                <-------GAMYB  --                            <---------WRKY12        ------>MYB46(1)            --------->ANAC58   ---  --------->DAG2       --------->ZAT14              --------->ANAC58           --------->ANAC58<----- ---------->DOF2<---------YAB1   --------->ANAC58   ------>MYB83<---------ATHB12   ----------->GT1<--   aaataaagcagtcgtatcaacattgttcagtcaactagcaactgagagtaaaccaagcaggatccaataagtagagagggcaagtctgttaattggtgcc  26455700                                                                                                    <                                                                                                    <                                                                                                 ----                                                                                             --------                                                                                           --------->LBD16                                                                                         <---------LBD16                                                                                         <---------At4g35610                                                                                         --------->At4g35610                                                                                      --------->SPL7<                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                              <---------DEAR3(1)          --------->MYB52(1) <-------                                           --------->ALFIN1              <---------WRKY38(1)------>NtERF2                                         <---------ANAC58                <---------WRKY12--------->LBD16                                         <---------ANAC58              <------ZmHOX2a(1)<---------ANAC46    --------->DAG2                  ------>ZmHOX2a(1)           <---------DEAR3(1)  <---------SPL7  -   ---------->DOF2                ----------->RAV1(2)       <---------HSFB2a(2)   --------->ETT(1)--- <---------YAB1                 <---------ARR14(2)          --------->HSFB2a(2)   <---------At1g77200 ------->YAB1                   --------->GLK1(2) <---------ZAT18  <---------ANAC46<---------DEAR3(2) ------>ICU4               --------->TOE1(2) <---------ANAC46--------->ETT(2)------->GAMYB ---------- -NtERF2        ----------->GT1 --------->ARR14(2)--------->ZAT18 <------NtERF2  <------NtERF2   ---- -------YAB1 --------->CCA1(2) <---------GLK1(2) --------->ALFIN1------>NtERF2 --------->ALFIN1 -----   atgataaaagtgaagagatggaaataaaacctagaatcctgaagcttgggggtggacttcttctcgacggcgaggacaacggtgtcggtaccgcggacac  26455800     <------NtERF2    ------>NtERF2    <---------ATERF1(1)    <---------RAP2.3(1)    <---------RRTF1(1)    <---------ORA47(2)    <---------DEAR4(2)    <---------ERF1   <---------RAP2.3(2)   --------->DEAR3(1)   <---------RRTF1(3)   <---------RAP2.3(3)   <---------DEAR3(1)  --------->ATERF1(1)  <------NtERF2  <---------ABI4(1) <---------RAP2.3(1) ------>NtERF2 <---------DEAR4(2) <---------ATERF1(1) <---------RRTF1(1) <---------ERF1          <----------DOF2 ---------DEAR3(1)   <---------DEAR3(1) ---------RAP2.3(3) --------->SPL7 ------->HVH21      --------->RAP2.6(3)                                                   --------->ARR14(2) ->SPL7           <---------SPL7                                   --------->At4g35610    <---------- ---------ATERF1(2) --------->ATERF1(1)                            <---------At4g35610    <---------ARR11(1) --ARR14(2)      <---------ANAC58             ---------->DOF2 <------NtERF2               <---------ARR14(2) -------->ATERF1(2)------>NtERF2    <---------ARR14(2)      <---------DEAR3(1)           <---------CCA1(2) ------>MYB52(1) <---------ANAC46   --------->ARR14(2)     <---------MYB52(1)            <---------ARR14(1) ->HVH21--------->DOF5.7(2)      <---------ANAC46         <-----------HVH21            ------>ZmHOX2a(2) ----->DEAR3(1)  <---------ANAC58<---------ANAC58    --------->WRKY38(1)    <---------ICU4------->TEIL ---->DEAR3(2)  <---------LBD16  <---------ANAC58    ----------->HVH21    --------->At5g28300      <-   cgacggcggcgttacccttgcggacggcttcaagggcgtattcgacttgaaagaggtgaccgtcgggggagaagacagtaattgctcgatcgtatctagc  26455900                                                         ------->TEIL                     -----------                                                         <---------ARR14(2)          ----------------                                                         --------->ARR14(2)          ----------->GT1                                                   <----------ID1                 -------------------                    <-----------GT1              ---------->DOF2           --------->ANAC58            <---------DAG2                    <---------YAB1               --------->ANAC46 -ARR10     <----------DOF2                 --------->YAB1                 --------->ANAC58 --------CCA1(2)<---------AHL20(2)          --------->AHL20(2)        ----------->HVH21   *TSS ------   catctctctctccgctttttattttcgttttcgttttcagggcaaattataaaaagacgaatcccaacttctgcgacaagccaagaacagaaaaaaaaaa  26456000                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                                --------->AHL20(2)                            --------->ARR11(3)                                ----------->TBP                            <---------ARR11(3)                             --------->TOE2(3)                            --------->ARR14(2)                             <-----------------AGL3                            <---------ARR14(2)                       <---------ICU4                            --------->ARR14(3)                      <---------YAB1           ----------->GT1  <---------ARR14(3)                    --------->YAB1  ---------->DOF2           <---------GLK1(2)                   --------->ANAC58               ------ ------------->ANAC81       --------->AGP1                   --------->ZAT18--------------->AGL15 -------->ANAC81           <---------CCA1(2)                 <---------ZAT18<---------------AGL15---- ----->ANAC81         <---------REM1(2)                      --------->ZAT14<----------DOF2<--------- ------------------>ANAC81----------->ARR10       <----------ID1--------->ANAC58         <-----------TBP   aaaaaaaagaagaaggaaatactctactcagatcttcaagtttttgagaagagagacaaatcgcgcactcatcatttcctttaaatgggccttatatacc  26456100                                                                                    ------>MYB46(1)                                                                                    ------>MYB83                                                                                    --------->MYB52(1)                                                                                  <---------MYB59      --------->TOE2(3)                                           --------->LBD16 --------->AtMYB61      <---------HSFB2a(2)                                  ------>MYB46(1)       --------->MYB46(3)      --------->HSFB2a(2)                               <---------HSFB2a(1)     -------->P   <-------     <-----------------AGL2                             <---------HSFC1(2)   --------->MYB46(3)     ----------------->AGL1    --------->YAB1           --------->HSFC1(2)   <---------MYB111(1)     <-----------------AGL1   <---------YAB1            --------->HSFB2a(1)  <---------MYB52(2) --->ANAC46                  <---------ZAT14           ------->TEIL   <----------DOF2    <---------MYB52(1) ----->ANAC46                --------->ZAT14     <-------TEIL ------>ZmHOX2a(1)--------->MYB52(1) -TaMYB80                 ----------->GT1--------->AHL20(2)------>MYB83      <---------MYB46(2)   caaaacttccataacaggcccattaacacagtataatggtcgattaaaaaatacatgaaccttcctcccgcgctttctaactaaccaaaccgttgatgaa  26456200                                                                                                 ----                                             --------->ANAC58                                   -----                                 --------->WOX13(1)                                             <----                                <------NtERF2--------->ANAC46                                   -----                               <---------ZAT18                                                  <----                       --------->ARR11(3)    --------->ANAC58                                   -----             --------------->AtSPL8 --------->YAB1            <---------MYB52(1)               <-----  --------->ATHB12    --------->YAB1<---------ICU4      <<<<<<<<<TBF1             --------->MYB46(3) --YAB1      <---------------AtSPL8<---------ATHB12<----------DOF2   <---------YAB1       --------->TOE1(2)   tgaatgatttaaaacattgtacaaacatattggcgcaatcatcccacaaacaactttcttcttcgttgtttctgataaaactgaaccacaaatgtacgaa  26456300                                              <------NtERF2                                              ------>NtERF2                                            --------->ATERF1(1)                                            --------->SPL7           ------>MYB83                    --------->TCP16(2)      <---------PCF2                       <---------ATERF1(1)                       <---------ALFIN1 ----->GLK1(1)                            --------->ARR14(2)                      --------->ANAC46 ---->GLK1(2)                             <---------TCP16(1)                     --------->MYB46(3) -------ARR10                             <---------PCF5             ----------------------->TaNAC69(2) ---->ARR14(2)                      <---------WRKY38(1) --------->LBD16       <---------ALFIN1 -----ARR14(2)         ---------->DOF2    <---------ARR14(2)        <---------MYB46(3)  <----------DOF2 -->TEIL   ------>MYB46(1)          <---------WRKY12   <---------ANAC46   --------->At4g35610 ------- ----GLK1(2) <---------ARR11(3)   <-----------HVH21    <---------LBD16    <---------At4g35610 -------   tctccatgggaccaagctctactactaaagtcgacttgtcaacgggtccgcctcttagcggggaagaaggttgttccgcttcaccctccactttccactt  26456400                                                                                                    -                                                                                                    <                                                               ------>ZmHOX2a(2)                <----                                                              <---------At4g35610               -----                                                              --------->At4g35610               -----                                                 <-----------HVH21                              <----                  <----------DOF2                <-----------TGA1                              ------               <-----------GT1                  --------->ANAC46                             <-------         --------->REM1(1)         ----------------------->TaNAC69(2)                     <---------ALFIN1       ------>ZmHOX2a(1)       --------->At4g35610       <----------DOF2                 --------->MYB46(3) -->ANAC46  <---------ICU4--------->ATHB12      --------->ANAC55(2)               <-------TEIL ------ -->bZIP60(2)<----------DOF2   <---------At4g35610<---------MYB52(1)  --------->YAB1   <-----------GT1   catcttctccttcatctttactttctcttgatttgctgacaaactcatttccgtcacttctttgatctgcaaaaatagtatggattcattcaccacctag  26456500  Previous    Next  AGI:  At5g66140.1    Description:  PAD2 (20S proteasome alpha subunit D2); peptidase. Identical to Proteasome subunit alpha type-7-B (PAD2) [Arabidopsis Thaliana] (GB:O24616); similar to PAD1 (20S PROTEASOME ALPHA SUBUNIT PAD1), peptidase [Arabidopsis thaliana] (TAIR:AT3G51260.1); similar to proteasome, alpha subunit-like protein [Solanum tuberosum] (GB:ABA40445.1); contains InterPro domain Proteasome alpha-subunit, conserved site; (InterPro:IPR000426); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353) Range:  from: 26454396    to: 26455990    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g66150.1    Description:  glycosyl hydrolase family 38 protein. similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT3G26720.1); similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT5G13980.1); similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT5G13980.2); similar to Glycosyl hydrolases family 38 protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49101.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48191.1); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:I Range:  from: 26456239    to: 26461660    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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