Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ARR14(2)              <---------ARR14(2)              ------->TEIL           --------->ANAC58           --------->ANAC58           --------->ANAC46         --------->MYB52(1)                       <---------ANAC58       --------->MYB46(3)                         <---------ANAC58                                 --       <---------MYB52(2)                     <---------GLK1(1)                                 -----     --------->ANAC46                      <---------At4g35610                                  <----     --------->ANAC58                      <------NtERF2                                       ------     --------->ANAC58                     --------->RAP2.6(2)                                -------- <-----------GT1 --------->ANAC46      ------->GAMYB                               --------->YAB1 <-- >TEIL--------->At4g35610           --------->MYB52(1)              --------->ZAT6 --------->AHL20(2)   aatttaccagcaaacgcatccgaaatgcctcaagagtacaacggcagcaattccctgtgtccaaaaaaaaacactattcaaacaataatatcccaaaata  26362900                                                                             ----------->HVH21                                                                           <---------ANAC46                                                                    <-------MYC2                                                                    ------->MYC3                                                                    <-------MYC3                                                                    ------->MYC2                                                      <------ZmHOX2a(2)    ----------------->AGL1                                                      <---------ZAT14      <---------ANAC58 ---------->DOF2                                     <---------ARR11(3)    <---------ANAC58 ------->YAB1                    <-------TEIL       --------->GLK1(1)<<<<<<<<CAMTA3 ---->YAB1                 ------>ZmHOX2a(1)     --------->LBD16   --------->ANAC58 -----ICU4                 ==========================HOX2a_HOX2a   --------->ANAC58   ---------->DOF2 --->ICU4                  ==================================HOX2a_HOX2a--------->WRKY38(1) ->YAB1             --------->ANAC58          ------>ZmHOX2a(2)    --------->ANAC46----------->GT1  - -------YAB1        --------->ANAC58  <----------DOF2--------->ARR11(3) --------->WRKY12   --------->CCA1(2)   atgaaaagaattcgttcttcataagcatcctaacatacatctttctgatcccagagatcactgaattgcacgcgttggcctgaagcagtaaagatagaga  26363000                   --------->ARR14(2)                   --------->ARR11(3)                   <---------ARR11(3)                  <---------GLK1(1)                  --------->GLK1(1)           ----------->HVH21                                           --------->O2        --------->GLK1(2)                                      <---------ARR14(2)        --------->ARR14(2)                                   --------->LBD16        <---------ARR14(2)                           --------->ZAT2    <---------O2        <-----------ARR10                            <---------ZAT2    <---------TGA1a        --------->ARR11(3)                           <------NtERF2 --------->AtMYB61        <---------ARR11(3)                           --------->At4g35610                           <-       <---------CCA1(2)                             <---------At4g35610                           --    ------>NtERF2<---------MYB52(1)      <------ZmHOX2a(1) <---------LBD16 ------>NtERF2          <--   --------->DEAR3(1)           --------->ICU4      <<<<<<<<<AtERF-3   --------->ANAC46 ----------->HVH21 -------->DEAR3(1)<---------CCA1(2)  --------->ZAT14<<<<<<<<<AtERF-4   --------->TGA1a----------->GT1   catcgccgagtatctcaccgatatcttctctgtaatcagtgaaggactcagtggcagctctcgcggaaaccacacgaggcctactaatcggtgaaacgga  26363100                             <------ZmHOX2a(1)              <---------AHL20(2)                                                               <-----              --------->AHL20(2)                                                         <---------ZAT14   --------->At5g28300 ----------->HVH21                                             --------->HSFB2a(2) --------ARR14(2)    <------MYB83                                                   <---------ANAC58 ------->ARR14(2)    <------MYB46(1)--------->ANAC58          --------->At5g28300   <---------ANAC46 ----ZmHOX2a(1)<---------AHL20(2)   --------->ANAC58         --------->YAB1         <---------ANAC58   ggaactgtaactggattttaatttggtgacaggaacagaagcaatcgacgatgagaaattcgatggtaactgagacaacatgggtttcgagcacagagga  26363200                                                   <<<<<<<<<<<<<<<<<LFY                                                   >>>>>>>>>>>>>>>>>LFY                                                --------->ARR14(2)                                                --------->GLK1(2)                                    ------>ZmHOX2a(2)                                  --------->ARR14(2)                                  <---------ARR14(2)                          --------->At4g35610   <---------ARR14(2)                   <------NtERF2  --------->ARR11(3)                  --------->RAP2.6(2)          <---------GLK1(2)                             <-------                --------->At4g35610<------ZmHOX2a(2)                         --------->YAB1  <------- -ZmHOX2a(1) ---------->DOF2      <---------ARR11(3)                       <---------ARR11(3)<-------   gaaattgtggaacaaataagcggcaatgagctcgaagatcgtagagagagaatcgccattggtgattcagaaaccaaaatcataaactcaatttggctta  26363300                                                <------NtERF2                                              --------->ALFIN1                                             ------->MYC4                                             ------->PIF5                                             <-------MYC2                                             -------->ABF1                                             <-------PIF5                                             ------->MYC3                                             <-------MYC3                                             ------->MYC2                                            <---------O2                                            --------->TGA1a                                            --------->ANAC46                                            --------->O2                      <------NtERF2                                            <---------ANAC55(2)              ------>NtERF2                                            <---------TGA1a                 <---------ANAC46                                            --------->ANAC55(2)             <---------DEAR3(1)                                           ------------>OsbHLH66            --------->DEAR3(1)                               --------->HSFB2a(2)    --------->MYB52(1)  --------->LBD16        *TSS                   --------->HSFC1(1)<---------ANAC46        --------->ANAC46     ------------------------>ANAC81  <---------AHL20(2)              ------->TEIL --ANAC58         <----------ID1      --------->AHL20(2)              <---------ARR14(2) --ANAC46       --------->YAB1 <---------HSFB2a(2)   <---------ATHB51 --------->ARR14(2) --ANAC58    --------->YAB1 --------->GLK1(2)<-------MYC4  ------->TEIL <---------LBD16    ----------   tggagaagacgagaagaataagaacaagagcatctagaaattaaacacgtggcgaataatggaccgagaatgtatccggcgtcgtttttagtttaaagcc  26363400                                                           <----------DOF2                                                          <---------ANAC58          ---------->DOF2                             <------------CBF                       --------   --------->AHL20(2)                            <---------YAB1                     <-------TEIL   <---------AHL20(2)                --------->AHL20(2)   <---------ANAC58       <---------MYB46(3) >DOF2  <---------YAB1          <-------TEIL     <---------ANAC55(2)          <------------CBF   catatttattttgaaagcccaattcaaatccaagtccattaaaacaaaattacgaaaattgctttcgattttctcatccaaattggttcgtcttccccat  26363500                                    --------->LBD16                                   --------->ANAC58                                   --------->ANAC46                                  --------->MYB46(3)                                <---------ARR14(2)                                --------->ARR14(2)                               <---------CCA1(2)                              <---------SPL7                             <---------ANAC58                             <---------ANAC46                             <---------ANAC58                            <------NtERF2                           ------>NtERF2                           <---------ORA47(2)                           <---------DEAR3(2)       --------->LBD16          <-----------GT1                          <---------DEAR3(1)      <---------LBD16     --------->ARR14(2)    <------NtERF2                        <-----------HVH21         --------->ZAT14     --------->GLK1(2)   <---------ANAC46                       ------->GAMYB------>NtERF2 <---------ZAT14--------->LBD16         <------NtERF2                      --------->MYB46(3)     <---------ZAT14    <---------ANAC55(2)     ------>NtERF2                      <------------AtMYB77   --------->ZAT18    <---------ANAC46       --------->LBD16                     <---------At5g28300*TSS --------->ZAT14   <---------LBD16        <---------LBD16 ->LBD16            <-----------GT1--------->ANAC58<---------ANAC46   <---------ARR14(2)--------->LBD16   aaactctcactctctagggttttaaccgtcggcgtatccgccatgagaacactgcggagaaatgttacggagaatcgtcttaccatctcccggcgtagaa  26363600                                                                                  --------->ANAC46                                                                                 --------->ATERF1(2)                                                                                 <---------ATERF1(2)                                                                                <---------LBD16                                                                               --------->MYB52(1)                                                         <---------YAB1 ------>ZmHOX2a(1)                                                       --------->YAB1   --------->LBD16                                             <-----------RAV1(2)      ----------->RAV1(2)                    --------->AHL20(2)     ====================================HOX2a_HOX2a            --------->MYB52(1)            <------ZmHOX2a(2)      <---------ARR11(3)           ----------->HVH21              =====================================HOX2a_HOX2a      <----          --------->AtMYB61              <---------ARR11(3)      <---------GLK1(2)--------->LBD16  <-        --------->ARR11(3)               <---------ARR14(2)      --------->ARR11(3)     --------->ARR11(3)        <-----------ARR10                --------->ARR14(2)      <---------ARR14(2)     --------->GLK1(2)        <---------ARR11(3)  ---------->DOF2------>ZmHOX2a(2)     --------->ARR14(2)     <---------ARR11(3)   cggagaagaagacctcaccgaataaaacagaaaagtcagtccagatcccagttgatatcatcatcgagatactcctgagattaccggcaaaatctatagc  26363700                                          <------NtERF2                                         ------>NtERF2                                        <---------ATERF1(2)                                <---------MYB52(1)                           ------>ZmHOX2a(2)                                          --------->ANAC46                          --------->GLK1(1)                                           --------->RAP2.6(2)         <---------ANAC55(1)   --------->LBD16                                        --------->ANAC58         <---------ANAC58 <---------GLK1(1)                                       --------->MYB46(3)         <---------ANAC55(2)  --------->ANAC46                                    --------->DEAR3(1)         --------->ANAC55(2)  --------->ANAC55(2)                          <----------DOF2         <---------ANAC46<---------ARR14(2)                               ------>ZmHOX2a(2)         <---------ANAC58<---------AGP1 --------->ATERF1(2)              <------ZmHOX2a(2)      <---------MYB52(1) --------->ARR11(3)     <---------GLK1(1)       <-----------ARR10     <-------GAMYB       --------->ARR14(2)    <---------ARR11(3)       <---------ARR11(3)    <---------ANAC58     <---------ARR11(3)    --------->ARR11(3)       --------->ARR14(2)    <---------ANAC58    <---------CCA1(2)<---------RAP2.6(3)            <---------ARR14(2) ------ID1           <---------LBD16  <---------At5g28300<---------At4g35610   <---------AtLEC2     < --------O2 --------->REM1(2)<---------LBD16 --------->ICU4       <---------WRKY18(1) --------->ANAC58   gacatgtcgttgcgtgtcgaaactctggatctccgtaatttgccgtcaagatttcacagagctgttcttgacccgatctttgcatcgaccgcaactctta  26363800  Previous    Next  AGI:  At5g65840.1    Description:  similar to antioxidant/ oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G37240.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81556.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 26360956    to: 26363308    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g65850.1    Description:  F-box family protein. Identical to F-box protein At5g65850 [Arabidopsis Thaliana] (GB:Q9FHP3;GB:O49533); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G31470.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60954.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 26363540    to: 26364836    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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