Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ------>MYB83                                <---------MYB59                                <---------MYB111(1)                                <---------MYB46(2)                    --------->DOF5.7(2)   --------->ATHB12                                     <-----         ----------->GT1       --------->ANAC46                                               -------      ---------->DOF2        <---------ALFIN1 <---------MYB46(3)                              <------ ---------GLK1(2)  --------->TOE1(3)     ------>ZmHOX2a(1)              --------->ANAC46     <-------TEIL ----->HSFB2a(2)   --------->TOE2(3)     <---------YAB1           <---------CCA1(2)       <---------MYB46(3) --->MYB52(1)     ----------->GT1 ------>MYB46(1)           <---------ARR11(3)      <<<<<<<<<<<<<<<<<LFY   cagaatgtgaaagctaaaaaacgttaaatctccacctaatctccttattggttcccatccaatttcttctatctaagaaaccaatacaacaatggttcgt  26320500                                                       --------->TOE2(2) --------->At5g28300                       <---------At4g35610             --------->TOE1(2)--------->LBD16                       --------->At4g35610          ------>MYB46(1)     ----------->GT1          <---------ZAT14                           ------>MYB83       --------->HSFB2a(2)          --------->ZAT14                         <---------MYB59      <---------HSFB2a(2)          --------->ZAT18                         --------->AtMYB61   <---------LBD16 --GAMYB  <---------ZAT18                   <-------GAMYB          <----------DOF2 -->MYB52(2)         <---------HSFB2a(2)   <---------MYB46(3)  <---------ZAT14 <----------ID1 ---MYB46(3)     >>>>>>>>>>GATA-1      ------>ZmHOX2a(2)   --------->LBD16 ---------->DOF2   tgaatatgtgagagcactcgatttcagaagaagggaagggatcgatggttaaccaaacctccgagtaaactttccggtaaaacgaagaagacttggctaa  26320600             --------->ANAC58             --------->ANAC58 --------->LBD16              *TSS             --------->ANAC46--------->HSFB2a(2)      <------ZmHOX2a(2)            <---------At5g28300                      --------->ARR14(2)         <-----------HVH21   <---------HSFB2a(2)     <---------ARR14(2)        <----------DOF2     <---------LBD16          <---------ARR11(3)    <---------CCA1(2)  <---------GLK1(2)        --------->ANAC46--------->MYB46(3)  --------->ANAC46  <---------ALFIN1   --------->YAB1--------->ARR11(3) ------>ZmHOX2a(1) <---------REM1(2)  <-------TEIL  <---------At4g35610          ------->TEIL   ttcctcgcatctttcacggcctacacattctccagaaacattcatcatctacgcagatcatcttcaacctctgaaactttctgcatctcgagtaatccga  26320700                                                             --------->MYB59                                                           --------->ICU4                                                         --------->ATHB51                                                         <---------ICU4                                                         <--------ATHB1                                                         -------->HAHB4                                                         --------->YAB1                                                         <--------HAHB4                                                         --------->ATHB12                                                        <---------YAB1                                                        <---------ATHB51                                                   --------->At5g28300                                                  ----------->GT1                                 <--                                                 <------NtERF2                                  <----                     ------------>CBF           <---------ZAT18                            <---------ZAT6                  --------->ANAC58          <-----------RAV1(1)                           >>>>>>>>>TAC1                  --------->ANAC58        <---------ICU4--------->AHL20(2)  <---------ANAC58    <----                ---------->DOF2          <---------YAB1 --------->ICU4      <---------ANAC58    <----              <---------RAP2.6(3)  ------->TEIL<---------ANAC46<------ZmHOX2a(1)  <------ZmHOX2a(1)   gtgctatgttttgggccgataagcccaatatttgatgaatcttattatggcgcagttaataattaggaacaagtatttgagtgaggacttcgagtgttac  26320800                               <------------CBF            --------->YAB1       ---------->DOF2       <---------YAB1              <---------AHL20(2) -------MYB52(1)          ------->TEIL                   --------->AHL20(2) -----ANAC58          <---------TOE2(3)      --------->AHL20(2)               <---------YAB1 -----ANAC46        <---------AHL20(2)       <-----------TBP  --------->MYB52(1)           <---------ATHB12 -----ANAC58       --------->AHL20(2)------>NtERF2  --------->ICU4----------->GT1  --------->REM1(2)   gttgggcctaaaagcccaatatttaatgaatcttattgaggcccagtttatataagtattaaaataacaggtatatagttatccttgtagccaaacatgg  26320900                                                             --------->ZAT14                                                             <---------ZAT14                                                            <-----------HVH21                                                           --------->O2                                                           --------->bZIP60(2)                     <-----------GT1                       =================================bZIP_DOF                   *TSS <---------DAG2                     --------->TGA1a                <----------DOF2                       --------->ANAC58            --------->ZAT18                           --------->ANAC46            --------->ZAT14                           --------->ANAC58            <---------ZAT14                         ---------->DOF2            <---------ZAT18                       <---------HSFC1(1)            --------->ABI4(2)                     <---------HSFB2a(2)          <------NtERF2 =============================================bZIP_DOF          --------->ATERF1(1)                     --------->HSFB2a(2)  ------>ZmHOX2a(2)         <---------ORA47(2)                       --------->HSFC1(1) --------->ARR14(2)      <-------TEIL         <---------DEAR4(2)          ================================bZIP_DOF           <-----------RAV1(2)         <---------DEAR3(2)          <----------DOF2=================bZIP_DOF          ------>ZmHOX2a(2)        --------->ALFIN1<----------DOF2           ============================HOX2a_HOX2a  <---------GLK1(2)        <---------DEAR3(1)   <----------DOF2      ------>ZmHOX2a(1)  <---------ARR14(2)==============        <---------DREB2C(2)  ========================================bZIP_DOF    <----------DOF2-----   atttttcaaggcggtgcactttcttacttttctttccttctttctctgtctcctagaagccacttcactgggatcgtctccatctttgatccaggttcgt  26321000                       <---------AHL20(2)                  <----------DOF2        <-----------ARR10        ------->TEIL   <---------AHL20(1)        --------->ARR14(2)        <---------ARR14(2)       <---------CCA1(2)<---------AHL20(2)              ----------->GT1                         -----   <---------ANAC46    --------->AHL20(2)              <---------YAB1                      ---------- =====================HOX2a_HOX2a         <---------DAG2<---------ZAT6              --------->LBD16 ----->ID1     ------>ZmHOX2a(1)          <----------DOF2--------->TOE2(3)         --------->ANAC46 -   cttcttcgtgaatcttcctgcttaattttttttttcagttactacttttttttggttattgttaattttctctgatggaaattctccgaaattgaaagtt  26321100                                                       <------ZmHOX2a(2)                                                     --------->At4g35610                                                     <---------At4g35610                                                 <-----------HVH21                                                --------->bZIP60(1)         --------->AHL20(1)                     <---------bZIP60(1)--------->CCA1(2)         <---------AHL20(1)             ------>ZmHOX2a(2)--------->At4g35610 ------>GT1                            --------->At4g35610        <---------ARR14(2)               <- >DOF2   <---------ARR11(3)           <---------ARR11(3) <---------At4g35610          <-----------GT1 --------->DOF2    --------->GLK1(1)  --------->ARR11(3)------>ZmHOX2a(2) <---------YAB1      <------   gttaaagccaaaatatttgggaattcaaaaacatttcgatgatctgaatgaggtcagatcgctgagaaaatatgggattataggttattttcgttttaaa  26321200                                            <---------AHL20(2)                                            --------->AHL20(2)                                          <---------AHL20(2)                                        --------->AHL20(2)                                        <---------AHL20(2)                                      <---------AHL20(2)--------->AHL20(2)                                  --------->AHL20(2)--------->AHL20(2)                                  <---------AHL20(2)<---------AHL20(2)                                --------->AHL20(2)<---------AHL20(2)                                <---------AHL20(2)--------->AHL20(2)                              <---------AHL20(2)<---------AHL20(2)           --------->ATHB12                              --------->AHL20(2)--------->AHL20(2)        <---------ANAC58                            <---------AHL20(2)<---------AHL20(2)          <---------ANAC58                            --------->AHL20(2)--------->AHL20(2)       <---------MYB52(1)                       <---------ARR11(3) --------->AHL20(2)         ----------->GT1  --------->ICU4                   <---------ANAC58   --------->AHL20(2)<---------AHL20(2)--------->ANAC55(2) ----------GT1     <---------ANAC58 <---------AHL20(2)<---------AHL20(2)  <---------ANAC55(2) ---AHL20(2)       <---------AtLEC2 --------->AHL20(2)--------->AHL20(2) --------->MYB52(2)   ttttctatgttttgtatgtttgcatgatatatatatatatatatatatatatatatatatatataactaagtcgttacttgattagccatttttgactta  26321300                          --------->AHL20(2)                          <---------AHL20(1)                          --------->AHL20(1)            <-----------RAV1(1)    ----------->GT1                  <-----------GT1           <---------TOE2(3)    <-----------RAV1(1)   <---------TOE1(3)      <----------DOF2     <---------AHL20(2)  <------ZmHOX2a(2)   --------->AHL20(2)       <---------LBD16  <----------DOF2   <---------ANAC46   <---------AHL20(2) <-------TEIL                   --------->GLK1(2)   tctactttctttttatgttgttgagtattttattgtgttgtttaatggatcattttcaggttcagagattaaacaatttgaaaaatcggagactctggga  26321400  Previous    Next  AGI:  At5g65740.1    Description:  protein binding / zinc ion binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO24613.1); similar to Os03g0726900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051138.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 26318729    to: 26320659    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g65750.1    Description:  2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative. similar to 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G55410.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ81426.1); similar to hypothetical protein OsI_015129 [Oryza sativa (indica cultivar-group)] (GB:EAY93896.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69246.1); contains InterPro domain Dehydrogenase, E1 component; (InterPro:IPR0010 Range:  from: 26320919    to: 26325415    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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