Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <            <----------DOF2                                       <---------GLK1(2)                --           <---------ANAC58                                   --------->At4g35610                 >>>       <----------DOF2                                        <---------At4g35610                <--- ----------HVH21     <------ZmHOX2a(2)                     <---------At4g35610                 <----- ----------TGA1     --------->AGP1                      ---------->DOF2                     ------>ZmHOX2a(1) ----TEIL  <---------ANAC58   <-------TEIL          ----------->GT1              <-----------GT1 <---   tcgtcacaactttgctttcttagatccaaaaattcgtctagctatagttcaaattggttaaagctgctgattctcagagtttttttctaaattcctatgt  26313100                                                     --------->ATHB12      <------ZmHOX2a(1)                             <---------YAB1    --------->MYB59                        --------->ANAC58             <------MYB83 ------ZmHOX2a(1)                          --------->ANAC58             <------MYB46(1)       ------- ------->ICU4                              ----------->GT1          <-----------RAV1(1)       <------ >>>>GRF7                                <---------ANAC46           <---------MYB46(3) ---------->DOF2 --------------AGL1                      <---------ANAC58      <---------YAB1        <------ZmHOX2a(2) ------HVH21                             <---------ANAC58    ----------->GT1   <---------REM1(1)  --- --------------AG                   ----------->RAV1(2)<---------WOX13(1)   <-----------RAV1(1)  ----   caggattaggaaatagcttcaagtagtagtttttgttcgtctggcatgtaatttctgattgaattgttatttgttggtatgttgtagatcaaagcggata  26313200                                            --------->CCA1(2)                                   --------->ATHB12   --------->ARR14(2)             <---------AHL20(2)                     <---------ZAT18   <---------ARR14(2)     <---------LBD16  --------->ARR14(2)    <----------DOF2 -->ARR14(2)              <---------At5g28300                   <---------DAG2 ---ARR14(2)          <----------DOF2<---------WOX13(1)    <-----------GT1 -------->GT1       ------->TEIL  <---------YAB1    --------->GLK1(2)    --------->ZAT18    --------- ----->DAG2     --------------->AtSPL3     <---------ARR14(2)<-----------GT1 <-----------RAV1(2)   aggtgtattcgatatgtagacgaactttcacggtttttaattggcgatatggagactctattttcacctttttagtggaccaggttagacaaatatacaa  26313300                                                               --------->ANAC46                                                               --------->ANAC58                   --------->AHL20(2)                          --------->ANAC58                  --------->YAB1                           <-----------GT1                 --------->AHL20(2)                   ------->TEIL               <----------DOF2      ---------->DOF2                              <---------YAB1    --------->ARR14(2) --------------->AGL15                             <---------ANAC46  <---------GLK1(2)       <------- >CCA1(2)    --------->AHL20(2)                    <---------ANAC55(2)   <---------YAB1   <----------DOF2   gagcctcttaaagaaaaaaataaaaatagtattgggcaacttataggcccattatgtatattaacaggccagtttctcataggcttttgatactttcatg  26313400                                        <---------MYB52(1)                                       <-----------HVH21                                       <-----------TGA1                                      --------->DREB2C(2)                                      --------->DEAR3(1)                                   <---------ALFIN1                                  --------->MYB46(3)        --------->At5g28300                               --------->DOF5.7(2)     ----------->HVH21                             --------->O2        ------->GAMYB                                   ----                             --------->ANAC46    --------->ANAC46              <---------CCA1(2)-----                             --------->ANAC58   <------------AtMYB77           *TSS       <<<<<<<<<TBF1           <---------TOE2(3) --------->bZIP60(2)--------->MYB46(3)           --------->ANAC58  <----- ----------->GT1           <---------ALFIN1<---------YAB1  ----------->GT1   --------->ANAC58<------- --AtLEC2  <---------TOE1(3) --------->ANAC58   --------->DEAR3(2)    <-----------GT1  <<<<<<<<<TBF1-   gactcgaaaatttagggtttcagagacgaccacgttaccaccgtcatgaaaccgccagtgaccgtaacatattcacctctcgcatcttcttcttcttcac  26313500  --------->ANAC58                                                               <---------TOE1(3)  ------------------------>ANAC81                                                <---------TOE2(3)  --------->ANAC58                                                           <------NtERF2          < ----->LBD16                                                               <---------ANAC58       <-- ---->ANAC46                                                    <---------HSFB2a(2)               --- ----LBD16           <---------ATHB12                           --------->HSFB2a(2)             <---- --REM1(2)         --------->WOX13(1)                --------->MYB52(1)    <---------ANAC46   ------- --------->DOF2 --------->GLK1(2)          >>>>>>>>>TBF1  <---------TOE2(2)<---------ANAC58 ------>NtERF2   ggagaagcaatcgaagagaatcaatcaactagacaaaaatcggaagaagaaacacaaaccgaggttttagaaacatggcgtctaaggtaatctctgccac  26313600                                                                --------->At4g35610                        --------->ANAC58                        --------->ZAT2                        =============================================MYC_MYB                        =========================================MYC_MYB                        --------->ANAC55(1)                     <---------ZAT2                        --------->ANAC58                        <---------At4g35610                        --------->bZIP60(2)                  ------>NtERF2                        =================bZIP_DOF            <---------At4g35610                        --------->TGA1a                      --------->At4g35610                      <---------ALFIN1                      <---------DEAR3(1)                    --------->AtMYB61                       --------->DEAR3(1)                   --------->MYB46(3)                       --------->RAP2.3(2)         --------->TOE1(3)<---------ZAT18                  --------->RAP2.3(1)      <---------ARR14(2)--------->O2                     --------->DEAR3(1)      --------->ARR14(2)--------->ANAC46  <------NtERF2  --------->ANAC46  --------->At4g35610 --------->MYB52(1)--------->ALFIN1 ------->GAMYB  --------->LBD16------>MYB46(1)      --------->LBD16   <---------MYB55(2)          <---------ANAC46 ---------LBD16--------->AtMYB61     --------->LBD16    --------->MYB46(3) ----------->GT1 -------ARR14(2) ------>MYB83 <---------DAG2            --------->DEAR3(2)<---------DEAR3(1)       -- ------>ARR14(2) --------->ANAC46   <---------LBD16     <------------AtMYB77        <---------TOE1(1) -----ALFIN1   <---------MYB59<----------DOF2          -------->P   ----------->HVH21        ------->TEIL ---->RAV1(1) --------->MYB46(3)   <---------LBD16   --------->MYB46(3)<---------ANAC46 <------ZmHOX2a(1)   aatccgcagaaccctaaccaaaccacacggcactttttcccggtgtcgctacttatcaaccgccgctgctgcgacggaggtgaattacgaggatgaatcg  26313700                                                        <---------ATERF1(1)                                                        ------>NtERF2                                                       --------->DEAR3(1)                                                    ----------->HVH21                                                  --------->ANAC58                                                  --------->ANAC58                                            --------->CCA1(2)      ---------->DOF2                      <---------ARR14(2)    <---------YAB1                         --------->ARR14(2)                --------->ARR14(2)  --------->YAB1                  <----------DOF2 --------->ANAC46           <---------ARR14(2) --------->ICU4           <--------P       --------->ARR11(3)          ------>ZmHOX2a(1) <---------YAB1        <---------TOE2(3)   --------->ARR11(1)        ------>ZmHOX2a(2)     ------->TEIL ------->YAB1         <-----------RAV1(2)----------->ARR10      <---------WOX13(1)      <---------YAB1   attatgatgaaaggagttcgaatttcaggtagacctctttacttagatatgcaagcgacgactccgattgatcctagagtattcgatgcgatgaatgctt  26313800                                                                             --------->ANAC58                                                                          --------->TOE1(2)                                                                    <---------HSFB2a(2)                                                                  <------NtERF2                                                                 ------>NtERF2                  <---------ARR14(2)                 <---------ZAT2 --------->HSFB2a(2)             =                  --------->ARR14(2) <---------CCA1(2)          --------->DEAR3(1)       --------->HSFB2a(2)    <-------TEIL <---------GLK1(1)   <------------------SPL14--------->ANAC58--------->ANAC46--------   ==========================HOX2a_HOX2a      <---------ANAC46  <---------ANAC46      <-----------HVH21   <------ZmHOX2a(2)             --------->ANAC58    --------->ZAT2<---------ETT(2)  --------->ZAT2 -  --------->ARR14(2)             --------->ANAC58    --------->At4g35610 --------->ANAC58<------NtERF2  <---------ARR14(2)  ------>ZmHOX2a(1)    --------->ANAC46  --------->ANAC58--------->ANAC58<-------  --------->AGP1 --------->GLK1(1)  ------->TEIL     <---------At4g35610 --------->ANAC58<---------HSFB2a(2)   cacagatccatgagtatgggaatcctcactcgcgaacgcatctctacggctgggaagctgagaacgccgtcgagaacgcacgaaaccaggtcgcgaaact  26313900                                  --------->At4g35610                                <---------LBD16                              <---------ARR14(2)                              --------->ARR14(2)                           <---------ANAC58                           <---------ANAC58                     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                   --------->ARR11(3)                           ---------->DOF2                   <---------ARR11(3)         --------->ATERF1(1)      --------->ALFIN1                  <---------GLK1(1)           <------NtERF2  --------->At5g28300    <---------HSFC1(2)  <---------ARR14(2)  <---------DEAR3(1)----------->HVH21    --------->HSFC1(2)  --------->ARR14(2)------->GAMYB      <------NtERF2              <------ZmHOX2a(1) ======================HOX2a_HOX2a--------->LBD16           <---------MYB46(3) <----------DOF2 ->ARR14(2)     <------ZmHOX2a(1)<---------DEAR3(1)        <---------ANAC46<---------ZAT18  --------- ----->ZmHOX2a(2) --------->GLK1(1)    --------->MYB52(1)  <---------DREB2C(2) <---------DAG2 --ARR14(2)--------->DEAR3(1) <-----------HVH21            <---------DEAR3(1)------->TEIL   ---------   gatcgaagcttcaccgaaggagatcgtattcgtgtccggtgcaacggaggcgaacaatatggcggtgaaaggagtgatgcacttttacaaggacacgaag  26314000  Previous    Next  AGI:  At5g65720.1    Description:  ATNFS1/ATNIFS1/NFS1/NIFS1 (ARABIOPSIS THALIANA NITROGEN FIXATION S HOMOLOG 1); cysteine desulfurase/ transaminase. Identical to Cysteine desulfurase 1, mitochondrial precursor (NIFS) [Arabidopsis Thaliana] (GB:O49543); similar to ATCPNIFS/ATNFS2/ATSUFS/CPNIFS/SUFS (CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE), cysteine desulfurase/ selenocysteine lyase/ transaminase [Arabidopsis thaliana] (TAIR:AT1G08490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22685.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65403.1); similar to Os09g0338400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062914.1); contains InterP Range:  from: 26313479    to: 26315298    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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