Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------LBD16           <---------AHL20(2)      --------->AHL20(1)   <---------ANAC55(2)           --------->GLK1(2) --------->AHL20(2) --------->MYB52(1)                                            --------->REM1(2)-- -------ICU4       <-----------GT1                                    <---------ICU4              <-- --->TOE2(3)---------->DOF2----------->GT1          <---------YAB1 --------->TOE2(3)  <--------------   taattacatatattaaaagtattaccggactgtataatctgtattatttgaaatgttattggaattgtttcttaattacaaacgtgaagacatgaatacg  26283200                                       ---------->DOF2                                    --------->ANAC58                                    --------->ANAC58                                    <---------ANAC55(2)                                    --------->ANAC55(1)                                    --------->ANAC46                                    --------->ANAC55(2)                                   ------->TEIL                                 --------->ZAT18                                 <---------ZAT18                <-----------ARR10                   -       <---------YAB1          <-------MYC3              <---------GLK1(1)                        ---   --------->ANAC55(2)         ------->MYC3              --------->GLK1(1)                        ---   --------->ANAC58            ------->MYC2             --------->ARR11(3)                      <----   --------->ANAC58       --------->ANAC58              <---------ARR11(3)                     <----- ---->NtERF2              --------->ANAC58    ----------->GT1   <---------ARR11(1)             ------ --------ID1 ---------->DOF2   <-------MYC2  <---------YAB1 ----------------->AG--------->ANAC46<---- ---------TaNAC69(2)    <---------ALFIN1--------->DAG2<---------TOE2(3)   --------->YAB1       <-----   acgacaagtattatacaaagttatccacacccatgtgcacgtaaagtatgcttaataagatttccaaatctatctataatcaacgtaatgtctagtcacc  26283300      <---------YAB1                                                                --------->AHL20(2)    --------->YAB1                                                               <---------ICU4   <---------YAB1                                                               <---------YAB1 <---------ICU4                                                                 --------->ICU4 --------->YAB1                                                               --------->bZIP60(1) -------->ICU4                                                                <---------bZIP60(1) --->MYB83                                                               <---------ANAC58 --->MYB46(1)--------->ZAT18                                             <---------ANAC58--------->AHL20(2) -----MYB46(2)                                   <-----------GT1     <---------ANAC58    --------->YAB1 ----ANAC55(2)                               <---------ARR11(3)      <---------ANAC46--------->AHL20(2) --->ANAC55(2)                             --------->ICU4            <---------ANAC55(2) -------->HAHB4 -----MYB59  <---------ZAT18               <---------YAB1            --------->ANAC55(2)<---------YAB1 ----At4g35610                <---------ARR11(3)--------->KAN4(2)    <---------ANAC58<---------AHL20(2)   taattatcacaatagtggacaaatagttgcattatctacaaaatcaagattatactctctatatgagtataacgtgagtgtcatcatttaattatagaaa  26283400                          ----------->GT1                    <---------AHL20(2)                    ---------->DOF2                   --------->YAB1                   --------->AHL20(2)          ------->TEIL                 ------------>CBF                   <---------AHL20(2)       <---------ATHB12          <---------ALFIN1            --------->ANAC58              --------->WOX13(1)         -------->P               <------            --------->ANAC58  --------->MYB52(2)                 <---------YAB1            --------->MYB46(3)   aaacacgattatgcaggctaattaaaacgcgttaattactgagtcaatgaacctataaaaccggcttatgctacccctcccaatctcatcacaaccatta  26283500                                                                  *TSS  ---------->DOF2                                              --------->YAB1 ------------------------>ANAC81<--------          ------------>CBF              <-----------GT1   --------->ANAC46                  <--------     <-----------HVH21              <-----------TBP     --------->HSFB2a(2)         --------->MYB59    <----------DOF2          <----------DOF2  --------->TOE2(3)  ---------->DOF2    --------------->AtSPL8 ---MYB52(1)           <----------DOF2<---------AHL20(2)<---------HSFB2a(2)         --------------->AtSPL3   gtctctctttcagacaattttggttctttttcttttgtatttatacattcttaatcttctacaaaacaaaagaagaaagacacatttcggtactaacatt  26283600                           <---------ANAC58                           <---------ANAC55(1)                           <---------ANAC58                           <---------ANAC46                           --------->ANAC55(2)                           <---------ANAC55(2)                          <-------TEIL                        --------->ARR14(2)      <---------ANAC55(2)           --------->TOE2(3)                        <---------ARR14(2)      <---------ANAC58              --------->YAB1                    <-------TEIL                <---------ANAC58              --------->TOE1(3)               <---------AHL20(2)               --------->ANAC55(2)   ----------->GT1 -TOE2(3)      --------->AHL20(2)               <---------ANAC55(1)<-----------RAV1(1) -YAB1       <----------DOF2          <----------DOF2     <---------ZAT6  <---------AHL20(2)   gttcttcatacctctctttaaattcatatacgtgtatatactttgtttatacgtgtgtttgtgttaattgtgttgtttaatcttaatcccaagttagtag  26283700                                                            <-----------HVH21                                                        --------->ATERF1(1)                                                        ------>NtERF2                                                        <------NtERF2                                                       <---------ATERF1(1)                                                       <---------DEAR4(2)                                                       <---------DEAR3(2)                                                       <---------SPL7                                                       ------>NtERF2                                                       <---------RAP2.3(1)                                                      <---------DEAR3(1)                                                      --------->DEAR3(1)                                                      --------->ATERF1(1)                                                      <---------RAP2.3(3)                                                      <---------RAP2.3(2)                                                      --------->ATERF1(2)                                                      <---------ATERF1(2)                                                      <---------RAP2.6(2)                                                     --------->At4g35610                                                     <---------DREB2C(1)                                                     --------->ATERF1(1)                                                     --------->DREB2C(1)                                                     <---------At4g35610                                                     <------NtERF2                                                     ------>NtERF2                                                    <---------RAP2.6(1)                                                    <---------RAP2.3(1)                                                    <---------ATERF1(1)                                                    ------>NtERF2                                                    <---------RRTF1(1)                                                   <---------DEAR3(1)                                                   <---------RRTF1(2)                                                  <---------LBD16                                                  <---------ABI4(1)                                                  --------->At4g35610                --------->ANAC58                  <------NtERF2                --------->ANAC58                  <---------At4g35610                               <             <---------ARR14(2)                   --------->ATERF1(1)                               -             --------->ARR14(2)                  <---------ATERF1(1)                                <          --------->ANAC58                       <---------RAP2.3(1)                               <-          --------->ANAC58                       <---------ERF1                                 -----        --------->MYB52(1)                      <---------DEAR3(1)           --------->ARR11(3) <----       --------->ARR14(2)                      <---------ZAT2               <------ZmHOX2a(1)  ------       <---------ARR14(2)                      --------->At4g35610        <---------TOE1(2)    ------     <------NtERF2                             <---------At4g35610       --------->LBD16      <------    --------->LBD16                            ----------->RAV1(2)       <---------LBD16      <------   <---------ANAC58                     <---------GLK1(2)  --------->ANAC55(2)                <------   <---------ANAC58         --------->ALFIN1   --------->ZAT2----------->HVH21                -------   <---------ANAC46    --------->MYB52(1)   <---------LBD16<---------ANAC55(2)<------ZmHOX2a(2)------  <---------LBD16 ---------->DOF2   <---------ZAT14<---------RAP2.3(2)  <---------ANAC46     --------   aaatggcgggaaacggaaacgaaagtaccggtggagacttcagtttctcggctgcggcggcccgtgatgcgcttccgaggatcacgactgagaagggcgg  26283800           <---------RAP2.6(2)           <---------ATERF1(2)           <---------DEAR3(1)      --------->LBD16 ---------ARR14(2) -------->ARR14(2)<---------O2 -----------ARR10 --------->O2 --------CCA1(2)  --------->TGA1a                                                              ------ ---->At5g28300   <---------TGA1a               <---------WRKY38(1)                            ====== --NtERF2  --------->ATERF1(2)              --------->LBD16                                   <------ZmHOX2a(2) >NtERF2  --------->RAP2.6(3)             --------->LBD16                                     ======= ----->GT1--------->ATERF1(1)             <---------LBD16                                    <------- ---ATERF1(2)<------NtERF2  <------ZmHOX2a(1)   <---------WRKY12                             <------- ---RAP2.6(2)<---------At4g35610 <---------bZIP60(2)                                         -------- ---DEAR3(1)------>NtERF2  --------->ICU4--------->DEAR3(1)                                  -------- -->ATERF1(2)--------->At4g35610 <---------bZIP60(1) <-----------HVH21             --------->LBD16 --->RAP2.6(2)    =============================================bZIP_DOF           --------->HSFB2a(2) ->RAP2.6(3)<---------RAP2.6(3)  --------->bZIP60(1)<----------DOF2               <---------HSFB2a(2)   caaatctccagggccggcagacgtctgccaggatgacatcgcaccgcgggtcaactttcagaccatcgacgagcttcacagtctccagaagaaacgatct  26283900                                        <---------At4g35610                                        <---------LBD16                                        <------NtERF2                                      <---------WRKY38(1)                                      <-----------RAV1(2)                                     --------->ATERF1(1)                                    <-----------HVH21                                 <---------ZAT18                               <---------At4g35610                               <------NtERF2     --------->ZAT6            --------->At4g35610     --------->AtMYB61         <---------ZAT2     <---------ALFIN1         ------>NtERF2    --------->MYB46(3)     ------>NtERF2--------->At4g35610   ------>MYB83           --------->DEAR3(1)   ------>MYB46(1)       <------NtERF2<---------WRKY12   -------->P            <---------At4g35610 >ZmHOX2a(2)             --------->ATERF1(1) =================HOX2a_HOX2a--------->DEAR3(1) =================HOX2a_HOX2a<-----------RAV1(2)                                                 ---- --ARR11(3)              --------->At4g35610         --------->PCF5 --------->ETT(2)           <----- --ARR14(2)             <---------ATERF1(1) <---------ARR14(2)      <---------ETT(2)          <------ ->ARR14(2)             <---------RAP2.3(1) --------->ARR14(2) ----------->RAV1(2)           <------- ->ARR11(3)------>ZmHOX2a(1)--------->ATERF1(1)   <---------ZAT6 ------>ZmHOX2a(1)          ---------   gcccctaccactcctcttagagatggcagcgccagcggagtcagcggaactagtggtccgactactcctgtctccagcgagaccatgcttcaatccgtca  26284000                                                        <---------AHL20(2)                                                       <---------YAB1                                                     <--------HAHB4                                                     --------->YAB1                                                     --------->ATHB51                                                     <--------ATHB1                                                     <---------ICU4                                                    --------->ICU4                                           <---------AHL20(2)                                           --------->AHL20(2)     <-----------GT1                      --------->AHL20(2)     <---------AHL20(2)                   --------->AHL20(1) ------->GT1                              <---------AHL20(1)                    --------->MYB59 ------RAV1(2)                            <---------AHL20(2)      ----------->GT1    --------->WOX13(1) ---MYB52(1)                    ---------->DOF2     <---------ATHB51     ----------->GT1          --- ----HVH21                   <---------HSFB2a(2)    --------->AHL20(2)  --------->DAG2 <---------ATHB12 >ANAC46                     --------->HSFB2a(2)    <---------ATHB12   ---------->DOF2--------->GLK1(2)   ggtatatttacatttgaatatagctcaacttccaaaaaacacaatttattttcaataattaatggggaatgtaaaaagttattaggccaatctatgttta  26284100  Previous    Next  AGI:  At5g65690.1    Description:  PCK2/PEPCK (PHOSPHOENOLPYRUVATE CARBOXYKINASE 2); ATP binding / phosphoenolpyruvate carboxykinase (ATP). similar to PCK1/PEPCK (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1), ATP binding / phosphoenolpyruvate carboxykinase (ATP) [Arabidopsis thaliana] (TAIR:AT4G37870.1); similar to phosphoenolpyruvate carboxykinase [Flaveria trinervia] (GB:BAB43908.1); similar to phosphoenolpyruvate carboxykinase [Flaveria pringlei] (GB:BAB43909.1); similar to phosphoenolpyruvate carboxykinase [Flaveria trinervia] (GB:BAB43907.1); contains InterPro domain Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994); contains InterPro domain Phosphoenol Range:  from: 26283566    to: 26286842    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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