Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         ----------->RAV1(1)                                                      --------->REM1(1)                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                                 <---------ARR11(1)          --------->ANAC46                       ------->TEIL       <---------WRKY38(1)     --------->CCA1(2) --------->GLK1(2)       <---------WRKY12      --------->YAB1   --------->ANAC58      <------ZmHOX2a(2)      -------->HAHB4   --------->ANAC58  --------->HSFB2a(2)       <---------YAB1    --------->ANAC55(2)  ------>ZmHOX2a(1)        <---------TOE2(3)  <---------ANAC55(2) -ZmHOX2a(2)    --------->AHL20(2)        <-----------HVH21   ---------->DOF2 -----HVH21     <---------AHL20(2)     <---------GLK1(2)  --------->TOE2(3)     <---------GLK1(2)   actcctcgatcaacgtaatttatcaagttaatgatacacaagattgtcacgaatctacaacataaaaagccctcaagagttagaatcgcttagtcaaaaa  26289700                                                         <---------ICU4                                                       --------->ARR11(3)                                                   --------->ANAC58                                                   --------->ANAC55(1)                  --------->ANAC58                                                   --------->ANAC46                     --------->ANAC58                               <---------ICU4      --------->ANAC58            --------->TOE2(3)    <                               --------->YAB1---------->DOF2                --------->GLK1(1)       <                     <---------ANAC55(2)  --------->TOE1(3)         <---------DAG2      --------->ANAC46                  <---------ATHB12        --------->TOE2(3)         <----------DOF2   <-----------GT1     ---------->DOF2 --------->ANAC55(2)  ------->GAMYB<---------ARR11(3)   <---------GLK1(1)       -   aaaaacacaaagctaggcaaatcacttatctaaacatgacacaaccctaaaacacgaaatctttgccttactttttggaaatctaaattcacccaattca  26289800                                                                                               ------                                                                                              -------                                                                                            ------>MYB46(1)                                                                                            ------>MYB83                                                                       --------->YAB1      --------->ANAC46                      --------->ANAC58                          <------ZmHOX2a(2)         --------->MYB46(3) ---------GLK1(2)     --------->ANAC58                         <---------ARR11(3)   --------->HSFB2a(2) ---------ARR11(3)  --------->YAB1                             --------->ARR11(3)   <---------HSFB2a(2) -------->ARR11(3) <---------ATHB12  <-----------GT1     ---------->DOF2<-----------TGA1-------------   tagattttgttttgtcatacaatcacgcttaaatcgttttcacaaaccagagagagagagaaagagatcacaatcgtcatcaacttccaaaacccaccaa  26289900                                                                  <---------HSFC1(2)                                                                  --------->HSFC1(2)                                                                  <---------At4g35610                                                                  --------->HSFB2a(1)                                                                  <---------HSFB2a(1)                                                                  <---------ZAT2                                                                 --------->ARR14(2)                                                                 <-----------ARR10                                                                <------NtERF2                                                               --------->LBD16                                                              <---------DEAR3(1)                                                             <------NtERF2                                                             --------->ATERF1(1)                                                             <---------LBD16                                                            <---------ERF1                                                            <---------RAP2.3(1)                                                            <---------ATERF1(1)                                                            ------>NtERF2                                                            <---------ORA47(2)                                                            --------->LBD16                                                           <---------DEAR3(1)                                                           <---------RAP2.3(2)                                 --------->LBD16           --------->ATERF1(2)                                --------->LBD16            <---------ATERF1(2)                                --------->ANAC46           --------->DEAR3(1)                               <---------HSFB2a(2)        --------->ATERF1(1)         <-----------ARR10                               --------->HSFB2a(2)        --------->RAP2.3(1)         <---------ARR14(2)                               <---------LBD16            <------NtERF2               --------->GLK1(2)                             ------>MYB83                 <---------LBD16         <------NtERF2        ---------->DOF2      -------->P                  <---------RAP2.3(1)     --------->LBD16 ---->DOF2                   ------>MYB46(1)             <---------ATERF1(1)   <---------LBD16 -->AtMYB61             <-----------GT1                 <---------DEAR3(1)<----------DOF2 ----------->ANAC81 <---------AHL20(2)         <---------MYB52(1)<---------ARR14(2)  <---------GLK1(2)   agaaataaacaaaagttccgatttttttaccttcccggagtcaaaaatcgttttttagtcgccggcggagcttcttctttagccggagaatctctctggc  26290000                                         --------->ZAT6                    <----------DOF2    --------->YAB1           <---------------AtSPL8           <---------ARR11(3)     <-------TEIL                ---------->DOF2          <---------ICU4       --------->At4g35610       ----------->GT1         --------->ICU4    <-----------HVH21          <----------DOF2        <---------YAB1    <-----     <-----------TGA1   <---------At4g35610       <----------DOF2 <----------ID1               ------   caactctcgtcattatctctgtctttcgctgtcagattcaataacactctgtctttctttagtaaaaaggaacaaaattttgataaatacagagagagac  26290100                      --------->ATHB12                                                          <----            <---------ARR14(2)                                                       <---------YAB1            --------->ARR14(2)   <---------ARR11(3)         ------------>CBF         <---------AHL20(2)      <---------ARR14(2)    <---------ANAC46 ----------->HVH21                      --------->AHL20(2)      --------->ARR14(2) *TSS   <---------CCA1(2)          <-----------GT1          <---------AHL20(2) ----ARR11(3)        <---------YAB1 <----------DOF2    <---------MYB52(1)  <-----------GT1     <----- --->ARR11(3)   ------>ZmHOX2a(1)--------->ARR11(3)  ----------->GT1 <---------YAB1--------->YAB1<---   cttctctgaatccgattcctgttttgatttgggtatatcttttacttctgacgaactgttatttcaatactctgatttatccgaattttaattctatttt  26290200                                                                      >>>>>>>>>>WRKY40                                                                      >>>>>>>>>>WRKY18                                                                      >>>>>>>>>>WRKY62                                                                      <---------WRKY18(1)                                                                     --------->WRKY38(1)                                                                     --------->WRKY45                                                           <--------ATHB1                                                           --------->YAB1                                                           --------->ATHB51                                                           --------->AHL20(2)                                                           <---------AHL20(1)                          <---------ARR11(3)               <---------ICU4                          <---------ARR14(3)              --------->ICU4                          --------->ARR14(2)              <---------ATHB12        --------->YAB1    --------->ARR14(3)              <---------ATHB51     --------->YAB1       <---------ARR14(2)        --------->ZAT18  --------->WRKY12  <----------DOF2         --------->ARR11(3)      <---------------AtSPL8                         <--- -------GT1               <-----------ARR10       --------------->AtSPL8                   ---------- ----AHL20(2)        ------------>CBF           --------->DAG2 <-----------GT1          --------->DAG2 --------GT1     --------->YAB1                 <---------TOE2(3)  <----------DOF2     ---------->DOF2   atcactttaataacaaaaatcaaaacaatatcttcttgttaacaaaaaataaggtgtacaataattttcctttgaccaaaaacaaaaaaaaaagtgtaat  26290300                                                          <-------GAMYB                                                         --------->MYB111(2)                                  --------->AHL20(2)     <---------MYB46(3)                              --------->AHL20(2)         --------->MYB111(1)                     --------->ARR11(3)    --------->GLK1(1)                  --------->AHL20(2)      <------ZmHOX2a(1)  ----------->GT1     <-----------GT1 <---------ARR11(3)<---------LBD16   --------->MYB52(2) <----------DOF2--------->TOE2(3) <---------AHL20(1)     --------->MYB55(2)                 --------- --------GT1 ----------->RAV1(1)  <---------AHL20(2)     --------->MYB46(2)      <-------TEIL   ----- ->GT1 --------->TOE2(3)      <---------AHL20(2)       <---------MYB52(1)       --------->CCA1(2)  --   ttccttttttcttaacaacataaaatctatttttaattaattcaggaatccaaatttgttagttggaaaaacatttaagtagatacaactattctcacta  26290400                                              <---------ICU4                                             <---------YAB1                         ----------->GT1     <---------ATHB12                        <---------TOE2(3)    --------->ICU4              <---------AHL20(2)      <---------YAB1                      <---------YAB1             <---------AHL20(1)     ----------->GT1           <---------ICU4     <------ZmHOX2a(1)<---------AHL20(2)   --------->YAB1     --------->ATHB12    <-------TEIL >ZAT6       --------->AHL20(2)     --------->YAB1           --------->ICU4   <---------TOE1(2)<----- ---->ZAT14  <---------AHL20(2)    <---------YAB1 --------->YAB1   <---------ANAC46 <---------YAB1 ------->ANAC46      <---------AHL20(2)   <---------AHL20(2) <---------YAB1   <---------TOE2(2)------   aacacaaggacacaatttttttttttaatgtgaaaatatgataaataatcattcatcttgttcatcattgtgtattttcataggttcttaatggaagtat  26290500        ----------->HVH21      <---------TGA1a      --------->TGA1a      --------->O2      <---------O2      <---------ANAC58      <---------ANAC46      <---------ANAC58                                                                           ----      <---------ANAC55(2)                                                                ---------->DOF2 ----ARR14(2)     ----------->RAV1(1)               ---------->DOF2                    --------->ANAC58 --->ARR14(2)<-----------HVH21  --------------->AGL15      --------->At4g35610         --------->ANAC58   atgcagagacgtgaaggtcacaacacaagtctttctccattgagttgtccattccaaagggagcaaaaaacaacttgtccctagatttcaagaaaggaga  26290600  Previous    Next  AGI:  At5g65687.1    Description:  transporter-related. similar to transporter-related [Arabidopsis thaliana] (TAIR:AT2G22730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43699.1); contains InterPro domain Major facilitator superfamily MFS-1 (InterPro:IPR011701); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 26287082    to: 26290125    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g65685.1    Description:  soluble glycogen synthase-related. similar to ATSS4/SSIV (STARCH SYNTHASE 4), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G18240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41058.1); contains InterPro domain Starch synthase catalytic region (InterPro:IPR013534) Range:  from: 26290358    to: 26293145    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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