Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <-------TEIL                                               <-----------GT1                                  --------->ZAT14        --------->HSFB2a(2) ----------DOF2                   <---------ZAT18        <---------HSFB2a(2)                        < -----ANAC58              <----------DOF2   ----------->GT1                               ---------->DOF2 -----ANAC58  <---------GLK1(2)   <---------ZAT14     <---------YAB1                   >>>>>>>>>>MYB80   ttcttttgtaatagaagattgtccaagacttttctgtgaactaaactagttacattctgctagaaaatcagagaagatagcaaacttcaaaccaaagaag  26292700                                                    <---------ARR14(2)                                                    --------->ARR14(2)           ----------->GT1                          --------->GLK1(2)   --------->TOE1(3)                           ---------->DOF2          --------->ANAC58   --------->TOE2(2)                  --------->HSFB2a(2)               --------->ANAC58          ---   --------->TOE1(2)                  <---------HSFB2a(2)             ---------->DOF2             <--  ----------->RAV1(2)                ------>ZmHOX2a(2)      --------->AHL20(2)            ----------- ---------ARR14(2)                 <---------ARR14(2)       <---------AHL20(2)      <---------ICU4<--   agtaacctgagaattgtcaaactcttcatgcccttctgatctggaatcgaaaagaatccagtttaattacagagaagcaaaatcaattcttgcaacacaa  26292800                                                     <---------ICU4                                                     --------->ATHB12                                                     <--------ATHB1                                 <                                                     --------->YAB1                      --------->REM1(1) ------>AHL20(1)                                    --------->ICU4           ----------->GT1      <-- -------ARR11(3)      --------->ATHB12         --------->ANAC58    <-----------GT1      --------->ZAT14 >RAV1(1)--------->ANAC46             --------->ZAT6<---------ATHB12      --------->GLK1(2)  -------- -------AHL20(1)   ---------->DOF2 <-------TEIL--------->ANAC58   --------->AHL20(2)    <---------ZAT14   aatattcttctacacaaaccagaaagattgagaaaggttcactctagataagcaatgatttcatgaaattaactaaattctgtaaaatgctacactaata  26292900                               --------->At4g35610                               <---------ZAT14                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                   --------->ANAC58        --------->TOE1(3)      --------->ZAT14            --------->ANAC58             <---------ANAC58      -------->P     --------->ARR14(2)   <---------GLK1(1)                            <---------ANAC58      ------->TEIL   <---------ARR14(2)   --------->GLK1(1)                      ---------->DOF2 ---------YAB1   <---------------------WRI1      --------->ANAC46               <---------ATHB12 ---------GT1  <---------ARR14(2)  ---------->DOF2    <------ZmHOX2a(1)--------->TOE2(3) ->YAB1----------->RAV1(2)  XXXXXXXXXXXXXXXXXXXX>MIR415<----------ID1  --------->TOE1(3)   ttactatcaacctgaagaattcggatcgaacagagcagaaagagaaatctcacgaaggagacgaaactcaaaacctcaaacaatgaagcgcgtgagactt  26293000                                                                                <---------ANAC58                                                                                <---------ANAC46                                                                                <---------ANAC58                                                                               <---------MYB46(3)                                                                       <-------TEIL                                                                      --------->ARR14(1)                                                                      --------->CCA1(2)                                                                     <---------GLK1(2)                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                                    <---------HSFC1(2)                                                                    --------->HSFB2a(1)                                              ----------->RAV1(1)   <---------HSFB2a(1)                                             ----------->HVH21     ----------->ARR10                                         ---------->DOF2     --------------------->WRI1           <-------TEIL                 --------->ANAC58  <---------ARR14(2)   --------->MYB52(2)           <---------ZAT14              --------->ANAC46  --------->ARR14(2) <---------MYB52(1)           --------->ZAT18     <------ZmHOX2a(1)    --------->GLK1(2)--------->ARR11(1)     --------->STY1(1)  <----------DOF2 --------->ANAC58 <---------CCA1(2)  <-------GAMYB       -----  ------>NtERF2       ------->TEIL --------->PCF2  <---------GLK1(2)--------->HSFC1(2)         ------   tcgatgcctagggttcactatatggactttagaggatgacccacgaagcgacagattccatatcgtcggaagattcgccgttgcttgcatcgtttggaaa  26293100                                                                                                    <                         <---------LBD16                                                            <                        <---------LBD16                     <---------AHL20(2)                      -                       <---------At5g28300                 <---------YAB1                         ---                      <-----------GT1                    --------->YAB1                    ----------              <------NtERF2                             --------->ICU4                    --------->ARR14(2)             ------>NtERF2--------->LBD16               <---------YAB1                 --------->ANAC58             --------->LBD16   --------->ANAC58       --------->YAB1       <---------AHL20(2)--------            <---------ATERF1(2)<----------ID1       <---------MYB52(1)    <---------AHL20(2) --------            --------->ATERF1(2)--------->ANAC58    ----------->GT1 --------->At4g35610 --------->ANAC58 ---->DAG2  --------->DEAR3(1)--------->SPL7       --------->LBD16 <---------At4g35610 --------->ANAC46 ---->DOF2 <---------LBD16--------->ANAC46   *TSS --------->ATERF1(2)     --------->AHL20(2) --------   agtttcaatcttcgccggcaaaatttaccgggaacgacaaaatagaaaacagccggtaataataaatggagcttaaataaatagaaaacacgaaaacgcc  26293200       --------->YAB1    --------->ATHB51    <---------ICU4    --------->ATHB12    <--------HAHB4   <---------YAB1   --------->ICU4 <---------ICU4 <--------HAHB4 --------->YAB1 ---------ATHB12                                                             --------->ANAC46 ---------YAB1                                                     <------ZmHOX2a(1) -------->ICU4      --------->TOE1(3)                             <----------ID1 ------>bZIP60(2) <---------TOE2(3)                            ---------->DOF2    <---------ALFIN1 >DOF2<---------YAB1--------->TOE2(3)      --------->ZAT6----------------->AGL3 ----------->RAV1(1) ->ANAC46     <----------DOF2          <----------DOF2  --------->ANAC58     --------->ANAC58       < ->ANAC58  --------->GLK1(2)        --------->ARR11(3)  --------->ANAC46     --------->ANAC58      <- ->ANAC58 <---------GLK1(2)    <---------ARR11(3)       --------->ANAC58 --------->YAB1         -----   ccatcattattagaatctttaacattaaacctagatactatctttactctaaaattgcaccctataaaaggacaaatataagccacacagaaactatatg  26293300             --------->ZAT6                     <---------YAB1          <-----------GT1                    <---------YAB1     <---------MYB52(1)                      <---------AHL20(2)   --------->MYB59                   --------->ANAC46 --------->GLK1(2)    --------->AHL20(1)    --------->YAB1 ---------ARR14(2)    <---------ARR11(3)    <---------AHL20(1) --------GLK1(1)      <---------AHL20(1)    --------->AHL20(2)                              --------- ------>GT1<---------At5g28300 --------->AHL20(2)   <-----------GT1 <---------DAG2      <---------AtMYB61   gaaattcggtatttaccactacaatatttttaaaaatataccccaatattattgttactctcaaaactcaccttacaatgttttttttttttggtcgaga  26293400                         ---------->DOF2                    <---------AHL20(2)                   --------->AHL20(2)                   <---------AHL20(2)               --------->AHL20(1)               <---------AHL20(2)               <---------AHL20(1)               --------->AHL20(2)                                                    --------->ARR11(3)            --------->ATHB51              <---------ANAC55(2)  <---------AHL20(2)    <---------ARR11(3) >ETT(2)    --------->AHL20(2)           <-------TEIL       ----------->GT1      ---------->DOF2   --   gagggaagaccccataatttattaaataaaagtaacccaaaaatacataaaaaaaacatagtaagttaattttcttaagtgtttaaagacctcatactat  26293500                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)                                                                  <---------AHL20(2)                                                                 --------->AHL20(1)                                                                 <---------AHL20(1)                                                             <---------YAB1                                                            --------->AHL20(2)                                             <---------YAB1 --------->AHL20(1)                                            --------->AHL20(1) <---------AHL20(2)                                            <---------AHL20(1)--------->AHL20(2)                                       --------->AHL20(2) --------->AHL20(1)             ------------                                       <---------AHL20(2) <---------AHL20(1)          <-----------GT1                                 <---------AHL20(2)       <---------AHL20(2)    <---------AHL20(2)          <---------YAB1         --------->AHL20(2)       --------->AHL20(2)   --------->AHL20(2) ----->TEIL                  <---------AHL20(2)        --------->AHL20(2) --------->AHL20(2)   gaaccgaatattatgttcaactagtttacatatatttaaattttaatatttttgttttaaaatattatatatttaaaaatataaaattttacttaaaaaa  26293600  Previous    Next  AGI:  At5g65685.1    Description:  soluble glycogen synthase-related. similar to ATSS4/SSIV (STARCH SYNTHASE 4), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G18240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41058.1); contains InterPro domain Starch synthase catalytic region (InterPro:IPR013534) Range:  from: 26290358    to: 26293145    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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