Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                       --------->AHL20(2)                          <------MYB83 ------>ZmHOX2a(1)      <-------GAMYB            <---------AHL20(2)        <---------AHL20(2)<------MYB46(1)                  <---------ZAT14            --------->AHL20(2) ------->ARR11(3)        --------->MYB59              <---------YAB1            ----------->GT1 ----- ----DOF2      --------------------->WRI1          --------->ICU4         ---------->DOF2 ---------->DOF2   agatgttgttttaattcccttgtgagtttggtttttttttcctaggggaaaacattatgagttcagttgtataaacaaaagaaggaaatttaaaaagaga  26256300                                             ----------->GT1                                            --------->DAG2                                          ---------->DOF2    <----------DOF2                                    --------->AHL20(2)      <---------ANAC46           --------->AHL20(2)    --------->CCA1(2)          <---------ANAC58                     <---      ------>ZmHOX2a(1)         --------->ARR11(3)          <---------ANAC58         <---------ATHB51 -----ARR11(3)                <---------TOE2(3)        <-----------RAV1(1)           <---------YAB1 ---->ARR11(3)   ---------->DOF2<---------ARR11(3)  <---------AHL20(2)    <-----------GT1        <---   tgtttctcctaaattatatcaaagaacaaattgagatataaaataaaaggttatattatgttgctttgagggaaataaaccacttcgataattgaaatta  26256400                                                                                               ------                                                                                              <------        ----------->HVH21                                                                     -------     <---------ARR14(2)                                                  ---------->DOF2 <---------ANAC58     --------->ARR14(2)                                    --------->WOX13(1)            <---------ANAC58  <---------ANAC46                               --------->DAG2    ----------->GT1 --------->YAB1  <- <-------TEIL                               --------->AHL20(2)--------->YAB1       <---------ICU4<--- ------TOE2(3)----------->HVH21  <-------TEIL--------->AHL20(2)   --------->DAG2  <---------ATHB12--- ------------AtSPL8           <------ZmHOX2a(1) ---------->DOF2  ---------->DOF2  <---------YAB1<----   gggttcgtatatgacagtgaccgatgttcgaaggatgcatcatcaaataaaaaagctgtattaatcaaaaagttataaaggctaatcataagcgtgatta  26256500                                     <---------ICU4                                     <--------HAHB4                                     --------->YAB1       <---------DOF5.7(2)                                     --------->ATHB12    <---------WRKY12                                    <---------YAB1      --------->DOF5.7(2)                                  --------->YAB1       <-----------HVH21                            --------->ANAC46           --------->TOE2(3)                            --------->ANAC58          <---------ANAC55(2)                            --------->ANAC58   <------NtERF2 --------->TOE2(3)       <---------WRKY38(1)  <---------RAP2.3(1) --------->YAB1         --------->MYB46(3)    ------>NtERF2 --->YAB1               <---------ATHB12     <---------RAP2.3(2) ---YAB1               ------>MYB83 --------->ICU4    --------->ANAC46 -->ICU4               ------>MYB46(1)      <---------LBD16 --------TOE2(3)      --------->WOX13(1)   <-----------RAV1(1) ------YAB1          --------->MYB46(3) <---------ICU4<---------bZIP60(1)        <---------AHL20(2) ------>YAB1         --------->AtMYB61 <---------YAB1 --------->ANAC55(2)       --------->AHL20(2) >> -----AHL20(2)  ------>NtERF2    <-------TEIL--------->ANAC46    <---------AHL20(2)             <----   taatgttaatgactgtgcctccaccaatcaacgcattcatcattactgcggcacttacgtcaacgaattaatcttttatcgataaaattccaagaggccc  26256600                --------->ATHB51                 --------->ARR14(2)                <---------ICU4                   --------->ARR11(3)                <--------ATHB1                   --------->AGP1                <------------ATHB5               <---------ARR11(3)                --------->ATHB12                 <---------ARR14(2)                -------->ATHB1         <---------At4g35610               <---------ATHB12        --------->At4g35610               <---------ATHB51   --------->ANAC58               <---------YAB1     --------->ANAC58           <----------DOF2     <---------DAG2               --------->ICU4<---------------AtSPL3          --------------->AGL15            --------->AHL20(2)   --------->RAP2.6(3)        <-----------------AGL3                --- >>>>>>>MYB98--------->WOX13(1) --------->MYB52(1)<------ZmHOX2a(2)              <----------DOF2  <-- -----MYB59<---------ATHB12 ---------->DOF2 <---------REM1(1)<---------------AGL15               <---   taacttaggcttaatcaattattgggcctataaagaacggcaactgatgtagatccaaatgggctttatttagtaagcccaaactttatgttttctctta  26256700                                                                                            <--------                                                                                          -----------                                                                                          ------>NtERF2                                                                                         --------->At1g77200                                                                                         --------->DREB2C(2)                                                                  --------->ANAC58       <---------ETT(1)                            *TSS                            <-----------HVH21            ----------->HVH21                         <---------HSFB2a(1)               <---------MYB46(3)            --------->DEAR4(1)                         <---------GLK1(1)                <---------AtMYB61              --------->ANAC46               --------------------->WRI1                 --------->ALFIN1               --------->DEAR3(1)            <---------MYB52(1)                           <---------MYB52(1)              --------->RAP2.3(3)     ------>ZmHOX2a(1)  --------->ARR14(2)              --------->LBD16                 --------->RAP2.3(1) ------>ARR11(3)        --------->GLK1(2)            ------>ZmHOX2a(1)              ------>ZmHOX2a(2) -------ARR11(3)       <---------GLK1(2)       --------->MYB46(3) --------->ANAC58--------->ARR11(3) ------CCA1(2) <---------YAB1          ----------->GT1<---------LBD16         <---------MYB52(1)   tatcttcctgctctgttattagaaagaatctccgatttagatagaaacaacaatcctccggtggtcactcgctaatctccgtttgatctcgccgacactc  26256800                                                                 ----------->HVH21                                                                 --------->WRKY12                                                                 --------->WRKY38(1)                                                              <---------DEAR3(1)                                                            ------>NtERF2                                                           ----------->HVH21                                                           <---------O2                                                           --------->O2                                                           --------->DEAR3(1)                                                          --------->ATERF1(1)                                                          <------NtERF2                                                         ------>NtERF2                                                         <---------ATERF1(1)                                                        <---------DEAR3(1)                                                        ----------->HVH21                                                        --------->DEAR3(1)                                                       --------->ATERF1(1)                                                       ------>NtERF2                                                       <------NtERF2                                                       --------->RAP2.3(1)                                     --------->ANAC58 --------->LBD16                         -------                                     --------->ANAC58 <---------ATERF1(1)                     <------                                    --------->YAB1   <---------DEAR3(1)                  --------->KAN4(2)                            ------>ZmHOX2a(1)        <------NtERF2                      <----------TaMYB80                           <---------ANAC58      <-----------HVH21      ---------->DOF2--------->ARR14(2)      <---------At5g28300  <---------ANAC58     <---------ANAC58--------->At5g28300    <---------ARR14(2)  <----------DOF2       --------->GLK1(2)       <---------ANAC58<-----------HVH21      <---------MYB52(1) -ALFIN1        <------ZmHOX2a(1)  ---------->DOF2   <---------ANAC46 --------->LBD16 <---------MYB52(1) >RAV1(1)     <---------TOE2(3)    <---------ATHB12 <---------LBD16 <---------LBD16  ----------->GT1   gagccttttaccgatgaaggatggagattccttaccaataagcacttcttccgtcgcggcgacgacggtgaccggaaagaaggaaaccggttattccgct  26256900                                                                                                    -                                                                                                    <                                                                                           <------MYB83                                             <---------MYB52(1)                           <---------AtMYB61        --------->DAG2                  --------->GLK1(2)                                <---------MYB52(1)      ---------->DOF2                   --------->ARR14(2)                  --------->ANAC58       --   --------->HSFC1(1)                   <---------ARR14(2)   <---------WRKY12 --------->At5g28300 ---   --------->HSFB2a(2)           --------->ZAT2              <---------WRKY45 <--------ZAP1<------MYB46(1)   <---------HSFC1(1)            --------->At4g35610         <---------WRKY38(1) --------->WOX13(1)--   <---------HSFB2a(2)           <---------At4g35610        --------->WRKY18(1)--------->WRKY18(1)<-- -->At4g35610                    <---------ZAT2      <---------DAG2--------->ZAT18      <-------GAMYB ---At4g35610<---------DEAR3(2) --------->MYB52(2)   <----------DOF2        --------->ANAC58     <---   ctcttctcgaaaggccggtacaagttttgggccttagctgcgattctgttactcgctttctggtcaatgctcactggcacggtcaatctccgttggtctg  26257000                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                 --------->GLK1(1)                          ============================HOX2a_HOX2a                          ------>ZmHOX2a(2)     --------->ARR14(2)        <-----------GT1  =============================HOX2a_HOX2a     --------->TOE2(3)   <------ZmHOX2a(2)      <---------ARR14(2)                                  <     --------->TOE1(3)  --------->ARR11(3)      <---------ARR11(3)                                  - -------->At5g28300     <---------ARR11(3)      <---------ARR14(3)                      <------ZmHOX2a(2) ---------MYB52(1)      <---------ARR14(2)      --------->ARR11(3)                     --------->ARR14(2) ------->LBD16          --------->ARR14(2)      --------->GLK1(2)                   <---------HSFB2a(2) ------>ATERF1(2)  --------->At1g77200          <-----------ARR10                   --------->HSFB2a(2) --------->GT1     --------->DEAR3(1)           --------->ARR14(3)             <<<<<<<<<TBF1     <--- -------ATERF1(2) --------->DEAR3(2)            <---------AGP1              <<<<<<<<<TBF1------>ZmHOX2a(2) ------LBD16    <-----------GT1 <----------DOF2<------ZmHOX2a(1)         <<<<<<<<<TBF1 <---------ARR14(2)   ccggtaacattaaccatttcaccgacgatctcgtctttcccatccacgaggatctcgatgttcttgtgagtcttcttcttcttcttcgcgatctgttttc  26257100                                                                                  ------->MYC3                                                                                  <-------MYC3                                                                                 <---------O2                                                                                 --------->TGA1a                                                                                 <---------TGA1a                                                                                 --------->O2             <---------YAB1<---------ANAC46                                     ------->MYC2             <---------ANAC58                                                   <-------MYC4             <---------ANAC58                                           <---------REM1(1) <---------ANAC46             <---------ANAC55(2)                                     --------->ALFIN1   <---------ANAC46             <---------ANAC55(1)      ----------->GT1             --------->DAG2<-------MYC2 ---------GLK1(1)       <-----------RAV1(1)                      ---------->DOF2<-------MYC3 -------->GLK1(1) --------->ATHB12   <---------TOE2(3)  <------ZmHOX2a(1)       ------->MYC3   ------ ------YAB1  <---------ANAC46<---------ANAC46  <------ZmHOX2a(1) ==========================bZIP_DOF   tgatttctgtgaattacgtttgatttgtgttgtgttgatgaggttattaggaaatggaggagagggagaaagtggtgaagcacatgtgggatgtgtataa  26257200  Previous    Next  AGI:  At5g65640.1    Description:  BHLH093 (BETA HLH PROTEIN 93); DNA binding / transcription factor. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G10570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38705.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 26254281    to: 26256310    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g65650.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G36660.1); similar to unknown [Populus trichocarpa] (GB:ABK93535.1); contains InterPro domain Protein of unknown function DUF1195 (InterPro:IPR010608) Range:  from: 26256728    to: 26258741    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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