Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->At5g28300                                             <<<<<<<ZML2                                  -----------                                          <---------HSFB2a(2)                        <---------At5g28300                                          --------->HSFC1(1)                        <-----------GT1                                          --------->HSFB2a(2)        --------->ARR11(3) <---------ZAT14                                 --------->ANAC58                    <---------ARR11(3) --------->ZAT18           --------->ANAC58      --------->ANAC58                    <---------ARR14(2) --------->ZAT14           --------->ANAC58      --------->ANAC46          --------->ANAC46  ---------->DOF2          ------->TEIL           --------->RAP2.6(2)       --------->ANAC58<---------HSFB2a(2) ----->ETT(2)                 --------->ARR14(2)           --------->ANAC58--------->HSFB2a(2) ------ETT(2)         ------->TEIL  <---------ALFIN1----------->HVH21--------->ARR14(2) <---------ZAT18   ctacatacaatgcacgtatacatggatgttagaaaccgcaacctctagaactatatgacacacgaattgcagaacttctaaaagttttactgcagtaaaa  26253900                --------->DAG2               ---------->DOF2    --------->YAB1    --------->ATHB12    <--------HAHB4                      <---------YAB1                                         <-----    -------->ATHB1                      --------->ICU4                                    <----------DOF2    <---------ICU4                   <---------YAB1                                      <---------DAG2    <------------ATHB5      ---------->DOF2                 <---------ANAC46       --------------->AtSPL3   --------->ICU4       ------>ZmHOX2a(1)--------->ATHB12 <---------YAB1           --------------->AtSPL8   <---------ATHB12    <---------------AGL15          --------->ARR11(3)           --------->ZAT6 --------->WOX13(1)    --------------->AGL15        <---------YAB1                --------->At4g35610 >GT1--------->TOE2(3)----------------->AGL3    --------->AHL20(2)             <---------MYB52(1)   tatcaatcattaaaccaaaaagtctcctataaaagaaatttgattattgattatatgattttgagtgaaactttcttagcagttagcagtaccttttctt  26254000    <---------TOE2(2)                                    <---------AHL20(2)    <---------TOE1(2)                                    --------->AHL20(1) <---------ANAC46                     <-------TEIL ----------->GT1 <---------ANAC58     --------->AHL20(2)  <-----------HVH21       --------->GLK1(2)       <---------At4g35610 <---------ANAC58<---------MYB59   <---------DEAR3(2)    <---------AHL20(1)             --------->REM1(1) -----DOF2     -------->P          <---------MYB46(3)    --------->ARR11(3)        --------->ANAC46   ttttcgtaggctaaacttaccaaaataaaaactacatcggttcatgtcaagtcttgtaatatatagctaatctagtactagctataggctacagcaaaca  26254100                                                                    <-----------GT1             <----                   <---------O2                 --------->AHL20(2)  <---------YAB1            <------                   --------->O2--------->AHL20(1)             --------->AHL20(1)           --------->GLK1(2)               <-----------HVH21          <---------YAB1      <---------ARR11(3)  --------->AHL20(2)          <---------AHL20(2)   <---------AHL20(1)             --------->AHL20(2)  <---------AHL20(2)-         <---------YAB1        --------->AHL20(2)       <-----------GT1    --------->YAB1  <---------ARR14(2)      <---------YAB1           <---------AHL20(2)   --------->AHL20(2)  <---------ICU4    --------->GLK1(1)   aaaatgtttttattatttgtcacgagaaaacaataaaatgtgttatcaaactaaataaaaaccatatattatactaatcacaaattaaacgggaatcttt  26254200            <---------ARR14(2)            --------->ARR14(2)                     --------->AHL20(2)            --------->ZAT14                        <---------AHL20(2)            <---------ZAT14                        ----------->TBP     <---------AHL20(2)                          ----------->TBP     --------->AHL20(2)                        ----------->TBP <---------AHL20(2)                          --------->AHL20(2) --------->AHL20(2)                          <---------AHL20(2)                                     < -----AHL20(2)                               <-----------TBP                     *TSS             --- ----DOF2   <---------ZAT18                <-----------TBP           <----------DOF2              <-- -------->AHL20(2)  ----------->HVH21 <---------LBD16                --------->TOE2(3)            ---   tatttaattaatagtatactctctcacacagacagacatctctggatttatatataaatacagttcatcttctttaatccacaaactcacacacacacac  26254300                                                                                 ------->TEIL                                                                              <---------ATHB12 ---------ALFIN1                           <---------YAB1            <---------ETT(2) ------>ANAC58               --------->HSFB2a(2)                   <-----------HVH21 -------ALFIN1               <---------HSFB2a(2)                 <------------AtMYB77        -------- ------>ANAC58         <---------------AGL15          ---------->DOF2--------->ETT(2)        <-------   acacactctgttttcttcgtccattctattaccagaaaacagagtttgatagagagaaaagaatggaactgtcgactcaaatgaatgtgttcgaagagct  26254400                                                                             --------->TOE2(3)                                                                            <---------ICU4                                                                      --------->YAB1                        ------->GAMYB                                 <---------ICU4                        --------->DREB2C(2)                          <---------YAB1                       --------->MYB46(3)                          --------->YAB1                       --------->DEAR3(2)                   --------->ARR14(2)                      --------->MYB52(1)                    <---------ARR14(2)                    --------->MYB46(3)                   <---------ANAC58   --------->YAB1               --------->ANAC58                          <---------ANAC46  <---------YAB1               --------->ANAC58          --------->GLK1(2) <------NtERF2 <---------ICU4         ---------->DOF2--------->At1g77200      <----------DOF2   <---------ICU4                   -     <---------ETT(1)--------->MYB52(1)--------->MYB46(3)<---------ANAC58--------->YAB1           --- ->ARR11(3)--------->ANAC58       --------->TOE2(3)     <---------LBD16 <---------YAB1        ------- --ARR11(3)--------->ANAC58    ----------->RAV1(1)      <XXXXXXXXXXXXXXXXXXXXMIR842     -------------   tcttgttccgacaaagcaagaaacaaccgacaacaacatcaacaatctgagctttaatggcggatttgatcatcatcatcatcaattcttcccaaatgga  26254500      <---------ICU4      --------->ATHB12     <---------YAB1                                                        ------>ZmHOX2a(2)     --------->ICU4                                                        ========================HOX2a_HOX2a   <---------ICU4                                          =======================HOX2a_HOX2a      <- <---------AHL20(2)                                    <-----------GT1   ------->TEIL              <- -------->YAB1                        ----------->GT1 <---------CCA1(2)  <---------AGP1     ------>ZmHOX2a(1) ------>AHL20(2)                   <----------ID1<----------DOF2    <---------AtLEC2    ------->GAMYB ---->GT1                      >>>>>>>>>TBF1    <---------DAG2   <----------DOF2        --------->AtMYB61 ---->AG                  <---------ATHB12  <-----------GT1------>ZmHOX2a(1)           --------->MYB46(3)   tataatattgattacctctgtttcaacaatgaagaagaagacgaaaatacccttttgtatccttcttctttcatggatctaatctctcaacctcctccat  26254600                                         <---------MYB52(1)                                         --------->DOF5.7(2)                                        <-------GAMYB                                      <------NtERF2                                     ------>NtERF2                 <------NtERF2       --------->ABI4(1)                ------>NtERF2       --------->RRTF1(3)            --------->DREB2C(2)     --------->RAP2.3(3)            --------->ANAC58        --------->ANAC46            --------->ANAC46        <---------DEAR3(1)            --------->DEAR3(1)      --------->DEAR3(1)         <------NtERF2            --------->ANAC58        --------->RAP2.3(2)       --------->LBD16            ------->GAMYB          --------->ATERF1(1)       --------->DEAR3(1)            --------->RAP2.6(2)    --------->ORA47(2)       <---------LBD16           --------->MYB46(3)      <------NtERF2          --------->DEAR3(1)           <------------AtMYB77    --------->RAP2.6(1)    ------->GAMYB           <---------MYB55(2)      --------->RAP2.3(1)   --------->SPL7           --------->DEAR3(2)      --------->ERF1        --------->ATERF1(1)          ------>MYB83             --------->DEAR4(2)    --------->MYB46(3)          ------>MYB46(1)          --------->RRTF1(1)   <---------ATERF1(1)          -------->P<---------MYB52(1)--------->RAP2.3(1)--------->DEAR3(2)         --------->MYB52(1)       <---------ATERF1(1)   ------>NtERF2         --------->MYB55(1)       <---------RAP2.3(1)  <---------ATERF1(1)        --------->AtMYB61         ------>NtERF2        ------>NtERF2        <---------MYB46(2)        <---------RRTF1(1)  ----------->HVH21        --------->DEAR3(1)       <---------ETT(2)    --------->LBD16        <---------MYB55(2)    <-----------RAV1(1)    ------>NtERF2        --------->MYB46(3)--------->MYB46(3)        --------->ANAC46                  <---------ANAC58        <---------MYB111(2)<---------ALFIN1       ------>ZmHOX2a(1)               <----------DOF2       --------->MYB46(3) <---------MYB55(2)   ------>ZmHOX2a(1)                 <---------DAG2 --------ANAC58--------->DEAR3(1)<---------DEAR3(1)<---------LBD16        <-----------GT1     <------ --------ANAC58<---------ALFIN1<-----------HVH21 <---------ALFIN1  ----------->RAV1(1)<---------ANAC58   tgcttcttcaccaaccgccaccgttacaaccactgtcgccgccgttatcctcctccgcgaccgccggagcaacatttgactacccttttcttgaggcttt  26254700                                                                   --------->YAB1  --------->ARR14(2)                       ---------->CDC5                          --------->TOE2(3)  <---------ARR14(2)        <---------WOX13(1)               ------>ZmHOX2a(1)      <----------DOF2   <---------CCA1(2)     <---------YAB1   ------>ZmHOX2a(1)------>ZmHOX2a(2)     --------->ARR11(3) <---------ANAC58     --------->ICU4   ========================HOX2a_HOX2a    <---------ARR11(3) <---------ANAC58 ----DOF2 <-----------GT1     ------>NtERF2        --------->WRKY18(1)          <---------ANAC46   gcaagagataattgactcttcttcctcatcgcctccattgatccttcaaaatggtcaagaagagaactttaataatccgatgtcgtatccctctccattg  26254800  Previous    Next  AGI:  At5g65640.1    Description:  BHLH093 (BETA HLH PROTEIN 93); DNA binding / transcription factor. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G10570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38705.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 26254281    to: 26256310    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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