Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ------>NtERF2                                                                           ----------->RAV1(1)                                                                          --------->ANAC46         --------->ZAT2                                                  <------NtERF2         <---------At4g35610                                             <---------At4g35610         --------->At4g35610                                             --------->At4g35610         <---------ZAT2                                                 <---------ATERF1(1)    --------->At4g35610                                                <---------WRKY12    <---------At4g35610                                                ---------->CDC5  --------->REM1(1)                        --------->MYB46(3)          <---------WRKY38(1) <-------TEIL                             -------->P                 <-----------HVH21 ------>At4g35610                         ------>MYB46(1)        --------->ARR14(2)             ----- -------At4g35610                         ------>MYB83           <---------ARR14(2)             <---- -------ZAT2              <---------ARR14(2)  ---------->DOF2  --------->LBD16         --------->ATHB12 ------>ZAT2              --------->ARR14(2)------->GAMYB    <---------LBD16         <---------TOE1(2)   agcttcatctcagctctcttcacaagcgcatcggctcgttctccaaccgaaagcgacttcaaacgcggataagtcagcgccatatcgaacgatttgagag  26207400                                                           --------->At4g35610                                                     <------NtERF2                                                    <---------RAP2.3(1)                     ------>ZmHOX2a(2)              --------->RAP2.6(2)                    <------ZmHOX2a(2)               ------>NtERF2                   --------->ARR11(3)              --------->ATERF1(2)                   <---------ARR11(3)            <---------ATERF1(1)                               <-                   --------->AGP1               <---------DEAR3(1)                              <----                   <-----------ARR10--------->DEAR3(1)     ----------->RAV1(2)                  -----                   --------->ARR14(2)       ----------->HVH21                             <---------DEAR3(1)                   <---------ARR14(2) --------->SPL7<---------ATERF1(1)               <---------At4g35610                   <---------AGP1  --------->ANAC58<---------DEAR3(1)                 --------->At4g35610        ----------->HVH21<---------ZAT6    <-----------HVH21  ----------->GT1         --------->ZAT2< ---->At4g35610   <---------CCA1(2)--------->ANAC58<---------ATERF1(2)      xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -----At4g35610<---------ZAT2   --------->ZAT18--------->DEAR3(2)          <------ZmHOX2a(2)<--------   cagaagtatggtgaccgagcagatctagagctagggcacggacgatgtgaccggcggcatcatctggagaaatcgcgatcacattatcagcttcggtgag  26207500                                                                    <---------ANAC58                                        <---------SPL7         --------->ALFIN1                                       <---------MYB46(3)    <---------ANAC58                                      <---------AtMYB61      <---------ANAC58                                      --------->ALFIN1       <---------O2      ----------->TGA1                                  <---------ANAC58           --------->O2      ----------->HVH21                                  <---------ANAC46           <---------TGA1a --------->At4g35610        <---------ANAC58      <---------ANAC46               --------->TGA1a ----------->RAV1(2)        <---------ANAC58      <---------ANAC58               <---------ANAC46--------->ZAT2       ---  <---------MYB52(1)          <---------ANAC58               <---------ANAC55(2)                ----- -----NtERF2               <---------GLK1(1)             <------ZmHOX2a(1)   <---------At4g35610<---- -----At4g35610            --------->GLK1(1)        <---------ZAT2  <---------ANAC58          <------ ---->At4g35610         <---------TOE2(3)<---------ARR14(2)  --------->ANAC55(2)              <------ ---------ANAC46  <---------YAB1  <---------ANAC58  --------->ZAT2  <---------ANAC46          <------ ---HVH21         <---------TOE2(3) --------->ALFIN1<---------STY1(2)        ========================   cgccgttttggcgagagattgagattgagatttcttgggtgtggttcgggctcgagctaggagacgtgaggcttggattagctgacgctgggtttggagt  26207600       --------->MYB55(2)       <---------MYB46(3)   <---------DEAR3(1) <---------ANAC46 <---------ANAC58 <---------ANAC58 ------>ALFIN1                                                                                     >> ---->ALFIN1           <------MYB46(1)                   --------->HSFB2a(2)                       >> -------RAV1(1)       --------->MYB59                    <---------HSFB2a(2)                      --- ---ANAC58 <------MYB46(1) --------->MYB59     <---------ANAC55(2)                 --------->ARR14(2) ---ANAC58 <---------MYB46(3)   <------NtERF2  --------->ANAC55(2)                 <---------GLK1(2)< ---ANAC46--------->MYB59<---------MYB52(1) --------->ARR11(3)               --------->ZAT6      <--- =======RAV<------MYB83<------MYB83         <---------ARR11(3)        <---------TOE2(3)    <---------ANAC46   gtggctcggtgtttggttcggaatttggttaggcctcgttgagagagatacttaatcgcccagaacataaccaaggttaacaccagaattgctccttgta  26207700          <---------REM1(1)        <-------GAMYB       <-----------RAV1(1)                                            --------->ZAT6 >>>>>>>ARR2                                              XXXXXXXXXXXXXXXXXXXX>MIR4240 >>>>>>>ARR1                                         <---------At4g35610          <----------DOF2 --- ------>ATHB12                                 ------->TEIL       <-----------HVH21               --- ---------WOX13(1)                 <-----------GT1   --------->At4g35610     <-----------GT1      <-- ------YAB1                  <----------DOF2  <---------GLK1(2)  --------->ANAC46 <---------DAG2  <--   tgattgtttctgttgtagccatgtcttcttcctttttttgctctctctgaatctcagaagactaaaccagtcacactatatacactttattttctaccaa  26207800            <---------------AGL15            --------------->AGL15            ------>ZmHOX2a(1)           --------------->AGL15           <-----------------AGL1        <-----------GT1    <---------YAB1   <---------AHL20(2)   <---------AHL20(1) <---------AHL20(2)                          --------->At4g35610                                 ---- <---------YAB1                         <-----------GT1                                          ---- ------>AHL20(2)                       <---------AHL20(2)                          <---------GLK1(2) ------>AHL20(1)                      --------->AHL20(2)                        --------->YAB1 ------ -------ARR11(3) *TSS        <------------CBF<---------At4g35610 ----------->RAV1(1)--------->GLK1(2) -------AHL20(1)---------->DOF2----------->GT1                <-----------GT1 -------->P  <----------ID1   aatattattttttcctctaaaaggcattacaaattgtgaattttatcatctgaattttagaattttacaacataagagacaaccagaatttgaagacaaa  26207900                                         <-----------GT1                                     <---------RVE1(1)     --------->AHL20(2)             --------->ARR11(3)     <---------AHL20(2)             <---------GLK1(2)                               ---------->DOF2    --------->AHL20(2)            <---------TOE2(3)                            --------->DAG2 ----->ANAC58               <----------DOF2                                   ---------->DOF2 ----->ANAC58     <---------ARR11(3)<---------ARR11(3)    --------->ANAC58--------->ANAC58 ---->DOF2     ----------->RAV1(1)<---------TOE1(3)       --------->ANAC58--------->ANAC58          <   agccaaattaatacatacaacatattccctctttttaagatttttacaatggagaagacgaagcaaaatcacagacaagaaaaagggaaagaagaacatt  26208000                                                                                                    <                <<<<<<<<<TBF1                                    <---------ANAC58                   = <---------ANAC58                          <---------TOE2(3)     <---------ANAC58          <---------ANAC46 <---------ANAC58       <-----------HVH21 ---------->DOF2     <---------WOX13(1)--------->At4g35610-- ------------------------ANAC81<------ZmHOX2a(1)       --------->YAB1           <---------At4g35610<-   tttgcttcttgttgtttcttcttctctgtgagaggagttttttttaaagtattggtatcatcagattgcttactccattaagagctgtctatgtcgagtg  26208100                                                                                                   --               <------ZmHOX2a(1)                                                                   --      <---------TOE2(3)                                                                            --      <---------TOE1(3)                                                                           ---   --------->DOF5.7(2)                                                                            ---   <---------MYB52(1)                                                                             <--  <-------GAMYB====================HOX2a_HOX2a                                                  <---- =====================HOX2a_HOX2a                                                            -------- ------>ZmHOX2a(2)                                                                           <------- ------ZmHOX2a(2)                                                                   --------->MYB52(1) =====================HOX2a_HOX2a --------->RAP2.6(2)             ----------->RAV1(2)    <-----------HVH21 ------->ARR11(3)           ------>ZmHOX2a(2)                     <---------ZAT2 <---------At4g35610 --------ARR11(3)     --------->ALFIN1 <---------ATHB12         <---------ALFIN1 --------->At4g35610-   agatcgttaaggtaagaggaagaggtgtgatctaagtcgcaatcgtcgagactcactgttcttgctccacctggtttttgttcagctaactggtcatctc  26208200      --------->ZAT2      --------->At4g35610      <---------At4g35610      ----------->RAV1(2)    <-----------RAV1(2)    --------->MYB46(3)  ================RAV  ----------->RAV1(1)                                               --------->GLK1(2) ------->ANAC58                                                    <---------GLK1(2) ------->ANAC46                                             <---------YAB1 ------->ANAC58       ----------------->AGL2           --------->MYB111(1) --->NtERF2           ----------------->AGL3           --------->MYB52(2) ------>LBD16    ------->GAMYB                      ------------>MYB.PH3(2) -------LBD16  ------>MYB46(1)                     <---------MYB46(3) -----LBD16    --------->At4g35610         --------->WOX13(1)   --------->YAB1 ->At4g35610  --------->MYB52(1)          <---------ICU4  <-----------GT1                    -------- --At4g35610--------->MYB46(3)           <---------YAB1--------->MYB46(2)           --------->YAB1 -------->LBD16------>MYB83            --------->YAB1<---------MYB52(1)          --------->YAB1   cgcgcaacagctgaaccaactgcatccaaaaacagaacaattcatcattcaagttgttagttactattagaatctattgacaacaatagtgagactgcta  26208300  Previous    Next  AGI:  At5g65520.1    Description:  binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO23656.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 26206951    to: 26207817    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g65530.1    Description:  protein kinase, putative. similar to RBK1 (ROP BINDING PROTEIN KINASES 1), kinase [Arabidopsis thaliana] (TAIR:AT5G10520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23655.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 26207818    to: 26210332    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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