Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->YAB1                     --------->YAB1          ----------->RAV1(2)          <---------At4g35610           <-----------GT1                                  --------->AHL20(2)          --------->At4g35610--------->AtLEC2              ---------->DOF2       -------->P     <----------DOF2<---------YAB1--------->DAG2         --------->ANAC58     <---------ANAC58 ------->ZAT6    --------->ICU4  ---------->DOF2         --------->ANAC58     <---------ANAC58   aactctgctttcacctgtaactattatcaccatgaaaaagttttacattttaagaccccaagaaagagattacttcgattgcttacccaaataaaacaaa  26200800                                                                       --------->TOE2(1)                             --------->DAG2                            --------->TOE1(1)                       <---------------AGL15                 <----------DOF2        --------->ARR11(3)                       --------------->AGL15                =================HOX2a_HOX2a                      ----------------->AGL3                ------>ZmHOX2a(2)   ------>ZmHOX2a(1)                      ----------------->AGL1                ===========================HOX2a_HOX2a                      <-----------------AGL2              <---------ARR11(3)   --------->TOE1(3)                      ----------------->AGL2              --------->ARR11(3)   --------->TOE2(3)                  <---------DAG2      ------->TEIL      --------->ETT(2)   --------->GLK1(1)           <------ZmHOX2a(1)---------->DOF2    <---------At4g35610    ------>ZmHOX2a(1)          <----------ID1--------->LBD16       --------->ANAC58      ------>ZmHOX2a(2)         <------     ---------->DOF2  ----------------->AG    --------->ANAC58      ===================HOX2a_HOX2a  -   atttacagaaagaggacaaacctttccacaaaaagtaatgtatttggacagcaacttgtcgatcttttgatcctcgtatttccttagaacttgaagcttt  26200900                      <---------HSFB2a(1)                      <---------HSFC1(2)                      --------->HSFC1(2)        ------->MYC3                               ----------                      --------->HSFB2a(1)      <---------TGA1a                  --------->AHL20(2)                      <---------At4g35610      --------->TGA1a      <---------YAB1         --------->ALFIN1       --------->ANAC46              ------->TEIL           <---------ANAC46  ----------->GT1 ----DOF2--------->ZAT14          <---------YAB1<-------MYC3----------->GT1 ---------->DOF2<---------ANAC46 ----->ZmHOX2a(1)     --------->At4g35610      ========================================bZIP_DOF   tcctcgctcacagaactcgctggaagcttcccaactatgaatcaaacacacatgtgaaaattgggtttatatgatacaaaaagaaaataagaggtgtgaa  26201000                                  <---------ARR14(3)                                  --------->ARR14(3)                                  --------->GLK1(2)                                  <---------ARR11(3)                        ----------->GT1                        --------->ALFIN1                                         <-----------RAV1(1)                      ----------->GT1                                        <------MYB83     ---------->DOF2  <---------ANAC46                                       <------MYB46(1)      --- ->GT1  <---------------AtSPL8    --------->ARR11(3)         >>>>>>>>>TBF1  --------->MYB59    <-----   ttgagaagaaagagaacatacaaggggtgtaaacaaaatcttgagaaatattgcagagatgaagaagaacaatggagataggtatgttgttccatttctt  26201100                                                                                  <---------At4g35610                                                                             <---------GLK1(2)       <---------ATHB12                                                    <---------YAB1 ------->DOF2       <-----------GT1                   <-----------GT1      ------>ZmHOX2a(1)      <-- -----DOF2------->TEIL                    ------>ZmHOX2a(1)              ------>ZmHOX2a(2)        <--   taaagcccaatgaatcgtcttgtaaccttcttgtacatcgtttcctacagctatatatactttctccattcttgatcctgattctgcttctacttccaat  26201200                                            ------>ZmHOX2a(2)                                        <---------YAB1                              <---------ANAC46                              <---------ANAC58     <---------ZAT6              <----------ID1      <----------DOF2         <---------ANAC58   <---------ANAC46            ---------->DOF2 -------ANAC58 ------>ZmHOX2a(1)  <-----------RAV1(1)        --------->At4g35610                   <- -------ANAC58 ====================================HOX2a_HOX2a           <----------DOF2          ---   tcgtgagtctttgtttcctccatcttcttctggcttgtgttgatgatcgtttagtgttttgtctggtgaatggctcttttaaagacaaaagttttgttct  26201300                                                              <-----------RAV1(2)             <------                                                        --------->ANAC58                    ---------                                                        --------->ANAC46                    =========                             <----------DOF2         <---------ARR14(2)                     <--------                       <------------CBF           >>>>>>>>>WRKY6                           <---------YAB1                      --------->ATHB12          --------->WRKY12--------->At4g35610     <---------AHL20(1)                     <---------YAB1             --------->WRKY45----------->GT1         --------->AHL20(2)                    <---------GLK1(2)           --------->WRKY38(1)                     --------->AHL20(1)                    <---------ARR11(3)        <---------At4g35610                   --------->AHL20(2)                  --------->ICU4        --------->ICU4  --------->ANAC58            <---------AHL20(2)                  <---------YAB1        <---------YAB1 <---------LBD16            --------->TOE2(3) -----------CBF<------ZmHOX2a(2)      --------->YAB1 <---------ZAT14              <----------DOF2 ------>ATHB12--------->ARR11(3)   --------->WOX13(1)--------->ARR14(2)<-----------GT1  <---------AHL20(2)   tcattgtaacttgagagatcaagattattgactttgtctatcatgtttagttgactatacggaaacaggtgaatttccatctatctttaatttattataa  26201400                                                         <---------ICU4                                                         --------->YAB1                                                    <---------AHL20(2)                   ----------->TBP               --------->AHL20(2)            --------->YAB1                       --------->AHL20(1)           <---------YAB1                        <---------AHL20(2)         --------->YAB1                          <---------AHL20(1)         <---------ICU4           ------->TEIL  --------->AHL20(2)        <---------YAB1            <-------TEIL--------->TOE2(3)                 ----------->GT1 <---------ANAC46--------------->AGL15       <--------HAHB4                 --------->ANAC46 ---YAB1<---------ATHB12 <---------YAB1     <---------YAB1              <-----------GT1 >YAB1  --------->ICU4--------->ICU4        <------ZmHOX2a(2)        ----------->GT1 ================================MADS_MADS  --------->ICU4         ---------->DOF2              <---- -------AGL15 --------->ZAT6  <---------------AtSPL3<---------ATHB51--------->DAG2     --------->GLK1(2)   atggtgagtaatcataatactataaatatgaaaatgtacgtttgggatcattaaattattcattacaaaaaaagttacactctagtaaaattctatgttt  26201500                                                                                <---------ARR14(2)                                                                                <---------ARR11(1)                                                                                <-----------ARR10                                                                                --------->GLK1(2)                                                                           --------->AtLEC2             ----------->GT1          ----------->GT1                      --------->ANAC58            ----------->GT1         <---------ANAC58                       ------>MYB83   <---------ZAT14                  <---------ANAC46                       ------>MYB46(1)   --------->ZAT14           <-------MYC3                                  --------->ANAC58   <------  <---------ZAT6             ------->MYC3                            ----------->HVH21        <------ -----AHL20(2)<------ZmHOX2a(1)     <---------ANAC58      <-----------HVH21--------->ANAC46   <------   aatagtgtagaagagaggaaaattcagacaacgtgttagcttgtaacatctatctaggtgagtcacctcgagtgaccaagcaaatctatccaattagcgt  26201600                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                             <---------WOX13(1)    <---------WRKY18(1)                     <---------TOE2(3)              --------->ATHB12   --------->WRKY38(1)            <---------YAB1   --------->TOE2(3)      --------->AHL20(2) ---ANAC46                    <----------DOF2----------->GT1              <---------AHL20(2) ---ANAC58        --------->ARR11(3)        <---------TOE1(3)          ----------->GT1 ---ANAC58        <---------ARR11(3)    --------->At4g35610        --------->LBD16<----------DOF2   ctaggttgactaggtttcaagaacttcattttctttctcattagctaaggtaaacttaaaaaaacaatccgaaagtttaattggcttttgaagttttttg  26201700  Previous    Next  AGI:  At5g65500.1    Description:  protein kinase family protein. similar to protein kinase family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G49060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23658.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 26198319    to: 26201223    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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